Difference between revisions of "Os06g0607800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0607800| Description = Similar to 26S proteasome regulatory complex subunit p42D| Version = NM_001064569.1 GI:115468869 GeneID:4341487| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0607800|
 
GeneName = Os06g0607800|

Revision as of 20:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0607800

Description

Similar to 26S proteasome regulatory complex subunit p42D

Version

NM_001064569.1 GI:115468869 GeneID:4341487

Length

4056 bp

Definition

Oryza sativa Japonica Group Os06g0607800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25059545..25063600

Sequence Coding Region

25059653..25059761,25060493..25060612,25060836..25060972,25061073..25061234,25061362..25061448
,25061527..25061613,25061972..25062109,25062678..25062869,25062942..25063040
,25063145..25063219

Expression

GEO Profiles:Os06g0607800

Genome Context

<gbrowseImage1> name=NC_008399:25059545..25063600 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25059545..25063600 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggagggggaggacgcggcggccgcgcgacgccgcgcggcggccaccgactacaggaagaagctcctcacctgcagggagctcgaggcgcgcgcccgcacggcaagggacaacctgaaaaatgcaaagaaagattttgggaaaaccgaggatgacttgaagtcattgcaaagtgtaggccaaataattggtgaagtacttcgaccattggatagtgaacgattcatcgtcaaagccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttgattgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccacgagaggttgatccagtggtatataacatgctacatgaagaccctggcaacgtcagttactcagctgtgggtggattgtcggatcaaataagggaacttagggagtccattgaacttcccctgatgaatccaaaattgtttcttcgtgtagggattaaaccgccaaagggtgttctgctctatggtccacctggaactgggaagacactacttgctagagctattgccagtaacattgatgcaaactttttaaagattgtgtcaagtgctatcattgacaagtacataggtgaaagtgcacgtctcataagagagatgttttcctatgcacgggagcatcaaccatgcatcattttcatggatgaaattgatgccatcggtggccgaaggttcagtgaaggaaccagtgctgaccgggaaattcagagaacactaatggagctcttaaaccagttagatggatttgatgagcttggaaaggtaaaaatgatcatggcgactaatcgtcctgatgttttggaccctgcactccttcgtcctgggcggttggacaggaagattgaaattccactgccaaatgagcagtcgaggatggaagtcctcaaaattcacgcagctggtattgctaaacatggtgaaatcgattatgaagctgtcgtgaagctagctgaaggcttcaatggtgccgatctgcgcaatgtctgcactgaggctggcatggctgctattcgagcagagcgcgactatgtcattcatgaagatttcatgaaggcggtgcgcaagctgaacgacgccaagaagctcgagtctagtgcgcactacagcgcggactttggcaaggaatga</cdnaseq>

Protein Sequence

<aaseq>MAAEGEDAAAARRRAAATDYRKKLLTCRELEARARTARDNLKNA KKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLIA GTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELP LMNPKLFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGE SARLIREMFSYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD ELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEVLKIHAAGIAKHGEI DYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSA HYSADFGKE</aaseq>

Gene Sequence

<dnaseqindica>109..217#949..1068#1292..1428#1529..1690#1818..1904#1983..2069#2428..2565#3134..3325#3398..3496#3601..3675#tctcgctcgctccgctcttcttgacaaggaagcaaaagccgccgccgccgacgccgacgagagaggagagagagatcgccgccgacgtcgcaggagggggagggggagatggcggcggagggggaggacgcggcggccgcgcgacgccgcgcggcggccaccgactacaggaagaagctcctcacctgcagggagctcgaggcgcgcgcccgcacgggtacgtatgccttcccccattgtttcggcctcttccttccccttgcgcggatgtggattgctcggtgtctagggttttcggcctcttctactggggcggccctcccccgggtagcggtcgcgtgtagaggggggatccggtttccgtgggttgggttaggttgggtagggagggacactgcgactagggttttagctagggtaatctgtttgtcatgtgaagtgaattttggttctcggcgagggtttttgcttatggggtttgtgcttgtgaaagtaatgtgcggtacaggggtttggttcaggcgaaattttgctagtttttcacaatatatgcaactgacagaattgtgtataaaagcaatgtgcgaggtgtatggatcactctgctcttgtcctgttcgttggtgatgttacttggcgcctggcggagtctgtgctgcattttgtataggttgttgttaattcaggagttggtcatgaggacatgcgctaaaacttatatgtggatattcaattggatgttcttttgtgcggggtgatcctttttagttctttgtagcgtgcggaggacattgcattttgtgttgtgaagtgtcaaggtggtcagatttttggtgtattcaagctttcacattttgtgttaatttttttaaaaaaatttataaccgtatttgcttgtactttggttggcttgatcttatttgatggcccttttttatttgattgcagcaagggacaacctgaaaaatgcaaagaaagattttgggaaaaccgaggatgacttgaagtcattgcaaagtgtaggccaaataattggtgaagtacttcgaccattggatagtgaacgatgtaagtgaaaagttcccttccattgatctttgacaatatatttcctgtacaaataatagcataaaataggtgctgcatgcttatcatcaccaaatttatcattttgttgtttgttcttagttacataactttccactcatggtagtaaacctttaatttcttctcaatcgagtaataatttagttatttgtagtaaatcagctgaaaactttctttattgcagtcatcgtcaaagccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttgattgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgccacgagaggtatataagtgatttttcatttgcaaattactataggtgtataaaaaatatcgatgttacgaataatggaggcaaaaccgtaccttttccctctgctcaggttgatccagtggtatataacatgctacatgaagaccctggcaacgtcagttactcagctgtgggtggattgtcggatcaaataagggaacttagggagtccattgaacttcccctgatgaatccaaaattgtttcttcgtgtagggattaaaccgccaaaggtaacataaggaacaaagtgtcctttttaaataccatattattcatttatttcaaaaagagatgtcgatgcaatcttcaagatccttggatgtactaatgaagtatgcaactttttactcactgaagggtgttctgctctatggtccacctggaactgggaagacactacttgctagagctattgccagtaacattgatgcaaactttttaaaggtctgtttttttttaatgtttagcaaccatttcagacatgctagatatatgtttaactgatgtgtacttttaaaacagattgtgtcaagtgctatcattgacaagtacataggtgaaagtgcacgtctcataagagagatgttttcctatgcacgggagcatcaagtaagttcattttgttttgttactgtgtacctaataagttttaaatggtccatctatcttggtacatactcttaatgtagtgagggaagcaggaagttgccaaaggtgtaaaactgaaaaaataattgttttttctgcggtttttaaatgcctggaatattctttgtatgctcccttttcaaattcaaacaaattagtaaatgagagtgcctcagctcttgatgtactctgccagaaaacaaaggaaacacattagttgtcatgtatatcatgtatgcatttgtccacttctctacttaataaccagtctacttatattaatcatttgtgctacttttgttttgaactttttgtttagccatgcatcattttcatggatgaaattgatgccatcggtggccgaaggttcagtgaaggaaccagtgctgaccgggaaattcagagaacactaatggagctcttaaaccagttagatggatttgatgagcttggaaaggtacacatcttttactgaatagcattagttatgcataggcatgtagtaaattactgctaatgcaaatgattttgtgttgatgtgcatcataataaggttgtatgagcatgtgcatatacaagctgatacagtcacacacggtttctattgcttgtgattggcaattgtacaatacttgaataatagcatgttttgttctgccgtctttggtaacgtgacgcattattttgtccattgatcagagtactgatttagatttggaaacatatgtttgtttaagtttggttccaccaatcagctgcacaatcaactttatccgagttgcttcttgtaaacctcttttatttcctttgtgttaagattgattgactagctgatagcacatttgatctacatcagtatggaaatgtaattttggtatacagattccagataagagtgctagtttcaaaccatttggaagtccttgatggttgtcactgattcctttaatatgatgtggaaaactgtatgtgactcctggtattgcatggattgtgtgtaacagaattttcctacttttatacaggtaaaaatgatcatggcgactaatcgtcctgatgttttggaccctgcactccttcgtcctgggcggttggacaggaagattgaaattccactgccaaatgagcagtcgaggatggaagtcctcaaaattcacgcagctggtattgctaaacatggtgaaatcgattatgaagctgtcgtgaagctagctgaagtgagttaacctacttaacctgagcatggtaaaatcttgttttgcattttgttctaactgaggctgttccagggcttcaatggtgccgatctgcgcaatgtctgcactgaggctggcatggctgctattcgagcagagcgcgactatgtcattcatgaagatttcatgaaggtgggttatcacaaacacttctcttctgtctgtctctgcatcaaaacacaaggttagttcatagttctcaccatttctatctttgtgacgaaaaatggtttcaggcggtgcgcaagctgaacgacgccaagaagctcgagtctagtgcgcactacagcgcggactttggcaaggaatgaggctgatttggtgatgtgctgacttctttttttttctccatgggggaggaactgtcatgctgatcctactcctcacttgcaaaaatcctgcgatgatgatgatatacacgccaaattgaattagaaactgatccctctgaggtcaacctgacaaggagttgtgatcctgtcttctatttattgtacttcttgtaactttgggcatactcctatatgggatgattaattcgatttcatttattcccacaagcggctctgttcttcacgaatgattggacagattatggacgattgcttatcataaacctacaaataggttaaaacaaagttctaagcaatattgatgttgaatttattttcaagaaagttaagtcgtatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0607800, RefSeq:Os06g0607800