Difference between revisions of "Os06g0611500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0611500| Description = Similar to Polygalacturonase (Fragment)| Version = NM_001064596.1 GI:115468923 GeneID:4341515| Length = 2040 bp| De...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0611500|
 
GeneName = Os06g0611500|

Revision as of 20:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0611500

Description

Similar to Polygalacturonase (Fragment)

Version

NM_001064596.1 GI:115468923 GeneID:4341515

Length

2040 bp

Definition

Oryza sativa Japonica Group Os06g0611500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25261028..25263067

Sequence Coding Region

25261077..25261607,25262146..25262892

Expression

GEO Profiles:Os06g0611500

Genome Context

<gbrowseImage1> name=NC_008399:25261028..25263067 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25261028..25263067 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttcagaaaccatgacgctgccatggtcctcttcttcttcctcctcatggtgactacctacgccaacgcgcacggacacagcaagaagcccgaggagatcactcagggcgtttacggggcggcggcggcggtggcggccggccccggcggcacgttcgacatcaccaagctcggcgccgtcggcaacggcagggcggacagcaccggcgcggtgatggcggcgtggaggtcggcgtgcgccggcgccgggaagcagacgatcctgatccccaagggggatttcatgacgggggcgatggagctcaggggcccctgcaatggcgccgtgaccatccagctcgacggcaacctgctgggctccaacgacctcagcaagtacccgggcaagaagatgcccaactgggtcgaggtccgccatgtcgacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagcaagaactcctgcgccaagaactacaactgcaagctcctccccaacacgctggtgctgaacacggtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaacatctaccggtgcaaggacataaagatcagcggcgtgaccatcaacgccccgggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgccgccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtcaacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccggtacaaggacgagcgggacgtccgggacgtctccgtcacccgctgcgtcctccgcaagaccaccaatggcctccggatcaagtcgtacgaggactccgtgtcgccggtgaccgtgtccaaggtgtcctacgacggcgtcgtcatggaccacgtcgacaaccccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgactccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgggtcgtccaacacgccggcggtcgtccagctgctctgctccggcaagctgccgtgcagcggcgtcgcgatgcaggacgtcagggtgctgtacggcggcagcgacaagaagaccacggccgtctgcgaccacgcgctggggaagtccaccgggtgcctcaaggagctcgcttgcctctaa</cdnaseq>

Protein Sequence

<aaseq>MAFRNHDAAMVLFFFLLMVTTYANAHGHSKKPEEITQGVYGAAA AVAAGPGGTFDITKLGAVGNGRADSTGAVMAAWRSACAGAGKQTILIPKGDFMTGAME LRGPCNGAVTIQLDGNLLGSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGV WSKNSCAKNYNCKLLPNTLVLNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTIN APGDSPNTDGIHMGDSSKITIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIG SLGRYKDERDVRDVSVTRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNP IIIDQKYCPNSICTSKGDSKVSVRDVTFRNITGSSNTPAVVQLLCSGKLPCSGVAMQD VRVLYGGSDKKTTAVCDHALGKSTGCLKELACL</aaseq>

Gene Sequence

<dnaseqindica>50..580#1119..1865#cgccggagagagaagcaccggcggtcaataattaaaaaaaaagaaaaaaatggctttcagaaaccatgacgctgccatggtcctcttcttcttcctcctcatggtgactacctacgccaacgcgcacggacacagcaagaagcccgaggagatcactcagggcgtttacggggcggcggcggcggtggcggccggccccggcggcacgttcgacatcaccaagctcggcgccgtcggcaacggcagggcggacagcaccggcgcggtgatggcggcgtggaggtcggcgtgcgccggcgccgggaagcagacgatcctgatccccaagggggatttcatgacgggggcgatggagctcaggggcccctgcaatggcgccgtgaccatccagctcgacggcaacctgctgggctccaacgacctcagcaagtacccgggcaagaagatgcccaactgggtcgaggtccgccatgtcgacaacttcgtcatctccggcaagggcaagctcgacggccagggccccggcgtctggagcaagaactcctgcgccaagaactacaactgcaagctcctccccaacgtacgtgttacaccatgcatatggatcaatagatcatgaaacatataataggccttgtcttttctgatcatgatacacatttcggttacctcggtttccattagcacactttttaaattgctaaacggtactccctctgtttcagattatacgtcgttttgactttggacaaagtcaaactgctctaagtttaaccaagtttatagaaaaaaaaagtagtagcattttcaactcaggacaaatatattatgaaaatatattcaattattgatttaatgaaactaatttagtattataaatattgttatatttgtctataaactcaatcaaatttaaagtagtttggctttgaccaaagtcaaaacgacttataatctgaaattgagggagtaatatatttttcgtacgaaaactttcgaatattgacgttgctttaaaataccaggtaaagccattttaaaactcaattaatcatgcgctaatgattttctcattttacgtgcccttgaaccatttttggtgcgtttgatggatgcagacgctggtgctgaacacggtgaacgacggggtggtgagcgggatcacgctgctgaacgccaagttcttccacatgaacatctaccggtgcaaggacataaagatcagcggcgtgaccatcaacgccccgggggacagccccaacaccgacggcatccacatgggcgactcctccaagatcaccatcgccgccaccaccatcggcaccggcgacgactgcatctccatcggccccggcaccgacggcgtcaacatcaccggcgtcacctgcggccccggccacggcatcagcatcggcagcctcggccggtacaaggacgagcgggacgtccgggacgtctccgtcacccgctgcgtcctccgcaagaccaccaatggcctccggatcaagtcgtacgaggactccgtgtcgccggtgaccgtgtccaaggtgtcctacgacggcgtcgtcatggaccacgtcgacaaccccatcatcatcgaccagaagtactgccccaacagcatctgcaccagcaagggcgactccaaggtgtccgtcagggacgtcaccttcaggaacatcaccgggtcgtccaacacgccggcggtcgtccagctgctctgctccggcaagctgccgtgcagcggcgtcgcgatgcaggacgtcagggtgctgtacggcggcagcgacaagaagaccacggccgtctgcgaccacgcgctggggaagtccaccgggtgcctcaaggagctcgcttgcctctaatggattattaattcgatcatcatcgatctctttgtgtgtgttcatcgtgtttaagagacagatcgaggtttggagagcatatggatgtatccgcgtgtgttccttgattttgatcttccaagttaatgtccatatcctttctttctgtaaaattaagacccaaagctgcctcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0611500, RefSeq:Os06g0611500