Difference between revisions of "Os06g0611900"

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(Created page with "{{JaponicaGene| GeneName = Os06g0611900| Description = Similar to Victorin binding protein| Version = NM_001064597.1 GI:115468925 GeneID:4341516| Length = 6050 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0611900|
 
GeneName = Os06g0611900|

Revision as of 20:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0611900

Description

Similar to Victorin binding protein

Version

NM_001064597.1 GI:115468925 GeneID:4341516

Length

6050 bp

Definition

Oryza sativa Japonica Group Os06g0611900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25276859..25282908

Sequence Coding Region

25276859..25276953,25277417..25277558,25277647..25277772,25277855..25277932,25279440..25279553
,25280231..25280416,25280500..25280625,25280708..25280903,25280993..25281093
,25281188..25281265,25281362..25281607,25281718..25282908

Expression

GEO Profiles:Os06g0611900

Genome Context

<gbrowseImage1> name=NC_008399:25276859..25282908 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25276859..25282908 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcgcgcacgccgcctcgccaaccgcgcgctgctgcgccgcctcctcgcggcggcgacggcggagtccccggcggccccgtcccgcggcatctcgaccctggccaaggggtcgcgcccgcgcgcccccccacgcccggcgccccaccagtacaccacggggcggcggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcggcgacgccggcggagcaggcggcgatggcgtcggagtgcgggttcggcaccgtcgacgcgctcatcgacgccaccgtcccggccgccatccgcgcgccggagatgcgcttctccgggaggttcgacgccgggttcaccgagtccgagatgatcgagcacatgcagcgcctcgccgccatgaacagggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtgatcctgcgcaacctcatggagaacccggcgtggtacacgcagtacacgccgtaccaggcggagatcgcgcagggtcgcctcgagtcgctgctcaactaccagaccatggtcgccgacctcaccggcctccccatgtccaacgcctcgctgctcgacgaggccaccgccgccgccgaggccatggccatgtgcaacggcatcctcaagtccaagaagaagaccttcctcatcgcctccaactgccacccgcagaccatcgacgtgtgccagacgcgcgccgccgggttcgacctcaacgtcgtcgtcgcggacgccaaggacttcgactacggcagcggcgacgtgtgcggggtgctcgtgcagtaccccggcacggagggggaggtgctggactacgcggagttcgtcagggacgcgcacgcgcacggcgtcaaggtggtcatggccaccgacctgctcgcgctcacctcgctgcgcccgcccggcgagatcggtgccgacatcgccgtcggctccgcgcagcggttcggcgtgcccatggggtacggcggcccgcacgccgcgttcctcgccacgtcccaggagtacaagcgcctcatgcccggccgcatcatcggcgtcagcgtcgattccagcggcaagcccgcgctccggatggcgatgcagacccgggagcagcacatccgccgcgacaaggccaccagcaacatctgcactgcccaggccttgctcgccaacatggcagcgatgtatgctgtctaccatggtcccgaggggctaaaggcaattgccgaccgtgtacatggactggctggtacatttgcccaaggattgaagaagctcggaacagtgacggtgcaggagctgcccttcttcgacactgtcaaggtcaaggtcgctgacgcgaatgcgattgcccaggaggcctgcaagaacgagatgaaccttcgtgtcgttgatgcaaccacgataaccgttgcctttgatgagaccacaaccttggaggatgtcgacaagctgttcaaggtgttcaatggtggcaagccagtgaacttcactgctgaatccctcgcaccagaggtctcaagctcaattccgagtagccttgtgcgcaagagcccctacttaacccacccgatctttaacatgtaccatacagagcatgagcttctccgctacctgtacaagttgcaatccaaggacctttcactgtgccacagtatgatccctcttggttcttgcactatgaaactaaatgctacagtggagatgatgcctgtcacctaccccaactttgcaaacatgcacccatttgcacctactgaccaagccgcaggatatcatgaaatgtttgatgacttgggcgatctgctgtgcaagatcactggctttgattctttctctttgcaaccaaatgctggtgcttcaggggagtatgccggattgatggttatccgtgcttaccacagggcaagaggagactaccaccgggatgtctgtatcattcctgtgtcagcccatggtacaaatcctgcaagtgctgctatgtgtggaatgaagattgttgctgttggaactgattccaaaggtaacattaacatcgaggagttgaggaaagctgctgaagcaaacaaggacaacttggctgctcttatggttacctatccttcgacccatggagtctatgaagaaggcattgatgagatatgcatgataattcatgagaacggtgggcaggtctacatggatggagctaacatgaatgctcagaaacactacccagttcttttccgtggagtcaatggaactgttgcccatgagttcattattgatttaagaggatttaagacgactgctggtatagagccagaggatgttgcaaagcgtttgatggactatggattccatgcacctactatgtcatggcctgttccaggcacacttatgattgaaccaactgaaagtgaaagcaaggccgaactagataggttctgtgatgctctaatctcaatcagggaagaaattgcagagatagaaagtggcaaagcagatgtgaacaacaacgtcctcaaggtaaaatactactataccgctatctgttttcatatattagattgtcgcgtggacaatgtgtacggggatcgcaacctcatctgcactctgcaacagggatcccaagtcgcagaagaagctgcagctgctaccgcatga</cdnaseq>

Protein Sequence

<aaseq>MERARRLANRALLRRLLAAATAESPAAPSRGISTLAKGSRPRAP PRPAPHQYTTGRRPVSASALQPSDTFPRRHNSATPAEQAAMASECGFGTVDALIDATV PAAIRAPEMRFSGRFDAGFTESEMIEHMQRLAAMNRAYKSFIGMGYYNTHVPAVILRN LMENPAWYTQYTPYQAEIAQGRLESLLNYQTMVADLTGLPMSNASLLDEATAAAEAMA MCNGILKSKKKTFLIASNCHPQTIDVCQTRAAGFDLNVVVADAKDFDYGSGDVCGVLV QYPGTEGEVLDYAEFVRDAHAHGVKVVMATDLLALTSLRPPGEIGADIAVGSAQRFGV PMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSN ICTAQALLANMAAMYAVYHGPEGLKAIADRVHGLAGTFAQGLKKLGTVTVQELPFFDT VKVKVADANAIAQEACKNEMNLRVVDATTITVAFDETTTLEDVDKLFKVFNGGKPVNF TAESLAPEVSSSIPSSLVRKSPYLTHPIFNMYHTEHELLRYLYKLQSKDLSLCHSMIP LGSCTMKLNATVEMMPVTYPNFANMHPFAPTDQAAGYHEMFDDLGDLLCKITGFDSFS LQPNAGASGEYAGLMVIRAYHRARGDYHRDVCIIPVSAHGTNPASAAMCGMKIVAVGT DSKGNINIEELRKAAEANKDNLAALMVTYPSTHGVYEEGIDEICMIIHENGGQVYMDG ANMNAQKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRLMDYGFHAPTMSW PVPGTLMIEPTESESKAELDRFCDALISIREEIAEIESGKADVNNNVLKVKYYYTAIC FHILDCRVDNVYGDRNLICTLQQGSQVAEEAAAATA</aaseq>

Gene Sequence

<dnaseqindica>5956..6050#5351..5492#5137..5262#4977..5054#3356..3469#2493..2678#2284..2409#2006..2201#1816..1916#1644..1721#1302..1547#1..1191#atggagcgcgcacgccgcctcgccaaccgcgcgctgctgcgccgcctcctcgcggcggcgacggcggagtccccggcggccccgtcccgcggcatctcgaccctggccaaggggtcgcgcccgcgcgcccccccacgcccggcgccccaccagtacaccacggggcggcggcccgtgtcggcgtcggcgctgcagccgagcgacacgttcccgcggcggcacaactcggcgacgccggcggagcaggcggcgatggcgtcggagtgcgggttcggcaccgtcgacgcgctcatcgacgccaccgtcccggccgccatccgcgcgccggagatgcgcttctccgggaggttcgacgccgggttcaccgagtccgagatgatcgagcacatgcagcgcctcgccgccatgaacagggcctacaagtccttcatcgggatggggtactacaacacccacgtccccgcggtgatcctgcgcaacctcatggagaacccggcgtggtacacgcagtacacgccgtaccaggcggagatcgcgcagggtcgcctcgagtcgctgctcaactaccagaccatggtcgccgacctcaccggcctccccatgtccaacgcctcgctgctcgacgaggccaccgccgccgccgaggccatggccatgtgcaacggcatcctcaagtccaagaagaagaccttcctcatcgcctccaactgccacccgcagaccatcgacgtgtgccagacgcgcgccgccgggttcgacctcaacgtcgtcgtcgcggacgccaaggacttcgactacggcagcggcgacgtgtgcggggtgctcgtgcagtaccccggcacggagggggaggtgctggactacgcggagttcgtcagggacgcgcacgcgcacggcgtcaaggtggtcatggccaccgacctgctcgcgctcacctcgctgcgcccgcccggcgagatcggtgccgacatcgccgtcggctccgcgcagcggttcggcgtgcccatggggtacggcggcccgcacgccgcgttcctcgccacgtcccaggagtacaagcgcctcatgcccggccgcatcatcggcgtcagcgtcgattccagcggcaagcccgcgctccggatggcgatgcagacccgggagcagcacatccgccgcgacaaggccaccagcaacatctgcactgcccaggtacactacacgcacgccacccgttcaccaaaatgcctgacagcgacagaggcgataagagatacgatgaatttactagtcggtagtgataaagattggctgtggtgtaggccttgctcgccaacatggcagcgatgtatgctgtctaccatggtcccgaggggctaaaggcaattgccgaccgtgtacatggactggctggtacatttgcccaaggattgaagaagctcggaacagtgacggtgcaggagctgcccttcttcgacactgtcaaggtcaaggtcgctgacgcgaatgcgattgcccaggaggcctgcaagaacgagatgaaccttcgtgtcgttgatgcaaccacggttcgcttttctgttgatgtttcccttgtattgcaaccgagtgagtttgttgatgttgagtgttgagcattcaattcaagttgtgatgtgttgcagataaccgttgcctttgatgagaccacaaccttggaggatgtcgacaagctgttcaaggtgttcaatggtggcaagccagtaagtaatcattcaattggcgcaaaaatttgtgtgcttgatagtgaaattggatcgtgatattaaaatgatgtgtcgttacaatcatttttaggtgaacttcactgctgaatccctcgcaccagaggtctcaagctcaattccgagtagccttgtgcgcaagagcccctacttaacccacccgatctttaacatgtatgtgatgttaaaaggcatgctgcttttcttcactaatttcttgcagtgttaaaagataaaactgaacttatgttgtgggcttccaggtaccatacagagcatgagcttctccgctacctgtacaagttgcaatccaaggacctttcactgtgccacagtatgatccctcttggttcttgcactatgaaactaaatgctacagtggagatgatgcctgtcacctaccccaactttgcaaacatgcacccatttgcacctactgaccaagccgcaggatatcatgtgaggggaattcagcatttgtttagtttctaaatgcaaactgttcatcagatgatctgaaatggcttgttttgtgatgaaggaaatgtttgatgacttgggcgatctgctgtgcaagatcactggctttgattctttctctttgcaaccaaatgctggtgcttcaggggagtatgccggattgatggttatccgtgcttaccacagggtatgtcatcataaataagttggcatagctctcctgttttgtttcacattttatatttacaaaccatgttataaaaactgcaggcaagaggagactaccaccgggatgtctgtatcattcctgtgtcagcccatggtacaaatcctgcaagtgctgctatgtgtggaatgaagattgttgctgttggaactgattccaaaggtaacattaacatcgaggagttgaggaaagctgctgaagcaaacaaggacaacttggctgctcttatggtactgttctttttgctctgtaaatgttatcatttatctggtcttctggtagtactgtggaatgcctatggtctctctggtcaactattcactgttaaatttagagctagttttctaatactgtactatcactgcatcaccttttcgctatatttagcgtgttgcttaaagtcataaggctatttctgtactttttgttgtttctaatatatattaggatagaaaccagatagctgctccataacatgatccctatagtggctgtatttgtatacattcaataatttgaagttaatcgacatatataatagaaacaaatccccagttagtttagtttatctttttccatatgagcaattttatagtctttgagaaggtaccatgagataccactttttccattgtaaagttgatacctcctggtatctaattactaggaggtaccaaattttacactaaatttttagtacctcatggtatcttctcaaggattgtaaaattgctcttttccatataggctatagtccgcgggtgatttgtgaataagattttttttattatgggcatagaaacataatagttcactcaggttgatttgatttataaaacaagattttgaaatatgttggccttatgcgtaaagtaacagaatgttgcgtggttgctctgttcaccaggttacctatccttcgacccatggagtctatgaagaaggcattgatgagatatgcatgataattcatgagaacggtgggcaggtctacatggatggagctaacatgaatgctcaggttagttgtttgcagtttatcatgccatcagtctagcatgctctcttcaagtcttgatggattggaacgcattggggtgaggctctataaatcgtacagatggccttttggcatggcgatgattaaaaaaacaattagttgtgcctatgaattatactaaacatgtttatgtaacaagtctattttaattcagttccaaacacaagtataccttgttttgaaacaaacacagaagtaccaactttcatttgcatgtttatctttcaatgacccttatccaattaattatgctgagatatgctatcttcaataaaatatgataagctttctccaagttcatctgatcccaattgagaacttctgttatcgtaatttcaaaaaaccccatctgtcgagccaaaaatattcaatacactccctaactaacagaagttgtctttttacaggtcggattgacaagccctggctttattggagcagatgtttgccaccttaaccttcacaagacattctgcattccacatggtgggggtggtcctggaatgggtcctattggtgttaagaagcacttagcaccatttttaccatctcatccagtggtaggtgctctgaattcaatgtgctgataatctaaacagattaatgctcaatgcccaacacttaccttgaaatattagacaagattgatataacacagaatgctagacgaccttagaaaaattccatctttactcttttacagaattaggcaaattatacgaaatcatgttacactctataactagtcttttatgatgtgttggactgagtatatttcagaggattccacacaaacatacatttctctatgtcatcaacaatgctgtgttgatttttaaaaactagtttccttgtaatcctaactccttcaactcgagaactattgctggttttattttctcgctttcttggtgccacattagcttaggtgggtatgctaagtgacaccttattttcattttatattaacctaaactcctgaagcaagacttgcctgcatcatttttcatatcaaaagcatagtacggtgatattatgtaaaaaaatgctgtagaagtttttgttgatgataaaactactaaaccacattcggtactaaaaccagaagtgttcgttcataattccatcattctttttaacaaaaaaaagcagatgctacttcattaactagattaattctgtaattatcagatcaccaccggtggcttccctctccctgagaaaaccgaccctcttggtaccatttctgctgccccatggggatcagcgttgattctaccaatttcctacacatacatagccatgatgggttctaagggtctcactgatgcttcaaagattgcaatcttgaatgcaaactacatgacaaagcgtctggaggtatatttgttactcgtgatcacctattgctacctagtttgattgtgtttgaactagttttctaagttttaccatgttacctgtacagaaacactacccagttcttttccgtggagtcaatggaactgttgcccatgagttcattattgatttaagaggatttaaggtatctatcatagttattttggcatttggaccttgagttatgcatttcaattttcttaattggatatcgcaaccttttgcagacgactgctggtatagagccagaggatgttgcaaagcgtttgatggactatggattccatgcacctactatgtcatggcctgttccaggcacacttatgattgaaccaactgaaagtgaaagcaaggtaaaacactaaaacacatactatattccttagcattgtaccaaccattcttttatatgagcttaatgtcacatcaattatctcgcaggccgaactagataggttctgtgatgctctaatctcaatcagggaagaaattgcagagatagaaagtggcaaagcagatgtgaacaacaacgtcctcaaggtaaaatactactataccgctatctgttttcatatattagattgtaagttcgtaacacctatctatctatatacgggcaattatgttcttacccccaattcttataggttatataagatgttagtagaccccgttcaatcctagtcctcatgctgtatgcaattttggagatacattagcatggtccaaactcaaaagttcaaacatgaggcggctgcatagctcttgcatcaccaggatgttgacatgtgattcttgttttgttccgttgttgtgcagagtgctcctcacccgccccaacttctgatgagcgactcatggactaagccgtactccagggagtatgctgcgttccctgcagcgtggcttcggggcgccaagttctggccaacaacatgtacctacttgcttgctttctgtgtctccaaaagatcgctcttaatttgctcaacacaatttgacaccaacctaatctgtattctgccgtgtctgtgtgctcttaccaggtcgcgtggacaatgtgtacggggatcgcaacctcatctgcactctgcaacagggatcccaagtcgcagaagaagctgcagctgctaccgcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0611900, RefSeq:Os06g0611900