Difference between revisions of "Os06g0642900"

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(Created page with "{{JaponicaGene| GeneName = Os06g0642900| Description = Ubiquitin system component Cue domain containing protein| Version = NM_001064709.1 GI:115469149 GeneID:4341635| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0642900|
 
GeneName = Os06g0642900|

Revision as of 20:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0642900

Description

Ubiquitin system component Cue domain containing protein

Version

NM_001064709.1 GI:115469149 GeneID:4341635

Length

3470 bp

Definition

Oryza sativa Japonica Group Os06g0642900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27060545..27064014

Sequence Coding Region

27060972..27061058,27061156..27061329,27061472..27061698,27062428..27062584,27063632..27063814

Expression

GEO Profiles:Os06g0642900

Genome Context

<gbrowseImage1> name=NC_008399:27060545..27064014 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27060545..27064014 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctgcggtagtctgtggcaagaggtcctccgccatcttcgccgacgacctcctcccgccgtcccctccctctcctcactcccaccaccatccggccaagaggtcctgccgctcccctcaccgccgccgggaggcccacctccaccacctctcctccttgttcccgggcatggatccccagttgctcgaaggagctcttgatgcttctggagatgatttggattcagcaataaagagtttaaacaatctgcgcttggagtctacagaggctatcttatcagctactggttgcaaatctgaaaatgggctccccacagcagtttatccgtctgttgaaggtattgttaataatggtggtgtgagtacagctaatgaacacccagctgctgcagatagttgccagacaggtaataatggttctgaatgggttgagctatttgtcagagagatgacaaatgcatctgacatgggcgatgcgcgtgctcgcgcctcaagagctttagaagttttggagaagtcaatcgtggagcgtacaggagctgatgcagcacaaaacttgcaaaaggaaaatatgatgcttaaggagcaattgaccgtcgtgctgcgagagaacgctgtcctcaagcgagcggtcgccattcaacatgagcgccaaaaggagttcgacgagaggagccaggaggttcagagtttgaagcaacttgttgtgcagtaccaggagcaactgaggaccctagagataaacaactatgcgctgacgatgcatctgaagcaggctcagcagaacaactccatccccgggcacttcaatcctgacgtcttctaa</cdnaseq>

Protein Sequence

<aaseq>MSAVVCGKRSSAIFADDLLPPSPPSPHSHHHPAKRSCRSPHRRR EAHLHHLSSLFPGMDPQLLEGALDASGDDLDSAIKSLNNLRLESTEAILSATGCKSEN GLPTAVYPSVEGIVNNGGVSTANEHPAAADSCQTGNNGSEWVELFVREMTNASDMGDA RARASRALEVLEKSIVERTGADAAQNLQKENMMLKEQLTVVLRENAVLKRAVAIQHER QKEFDERSQEVQSLKQLVVQYQEQLRTLEINNYALTMHLKQAQQNNSIPGHFNPDVF</aaseq>

Gene Sequence

<dnaseqindica>2957..3043#2686..2859#2317..2543#1431..1587#201..383#ctccgcgatccgcctccgcctcgagcccaaacccacccaccaacccaacccaatcccatcgagaggaggggacgcggcggcggcggcggatcggcggcgggggaaggaaggggatgggcggcggaggcggggagtaggacggcgtcggcggcgagcggcagcgcgaggaggacgaggaggaggaggaggcgaggggcaccatgtctgcggtagtctgtggcaagaggtcctccgccatcttcgccgacgacctcctcccgccgtcccctccctctcctcactcccaccaccatccggccaagaggtcctgccgctcccctcaccgccgccgggaggcccacctccaccacctctcctccttgttcccgggcatggatccccaggtccgtccttttcttttctcctcttgtcgaattttgaaggaggatgtggtagatggatactggtatcattttttgaggcggaaactgagcagtttgttattgggatcccgtgtttgggggaggtgaggtgaggtgggtgcgtgcatgttgaggtgtggcgacgatgattcatgggtaaattttcctggtctgcgtgtgatcaccggtgactaatttgggcgggctaagatgaggaaaaaaaatgcgtgttctttatggcttagatttgtgatcccatttggtcttcacgggttgttttgtgggggtcgaacttgttgttctggtgtatggattgctgcaagctggatccttttcatcagaaagtgggcattttcacttcctttgtggaggtgtaaggacgaagggcatgccaatcagaattagggctcttgtggcgttttggttggatgatcttgtgacgcttgtgctgccctgcggtctggggaggaaaaaggagcgaacttggaggctttgggagatgctttttgcattggtgttttctttgatagcattgaatctactgctttcctgtatgtgtttgtttaccaccctttacctatggatttagtgttcagatccttttagataaggaaaacataccagttccacctataggtatcatcaaatcaattgatggcacaatttatacatgcttatcatttccagtactggatgatgggcaccactatgccgatgactatgagtacaccttagagattacatctctacatgtaatgtttcttggagttttgcaaagctacactctctcattcgagaaagttgtggtttcctgcctgcagagactaggcaaggttgatgagcactgaacagctgtgtttatattcttctacactatatcaaatgattgttgcatgggcaaattcatgcgtgtatcctttgttagttctgcgtaatgtttatcctttgtagtaatgccaggtatttgtgcacagtattatctctatgccatataactaactgatcatggtttctgaaaattcattttagttgctcgaaggagctcttgatgcttctggagatgatttggattcagcaataaagagtttaaacaatctgcgcttggagtctacagaggctatcttatcagctactggttgcaaatctgaaaatgggctccccacagcagtttatccgtctgttgaaggttcagcttttaaccaaaagctttttatttctaggatctgtgcatataattctcatgcactagtacttcttgcttttgtcacacttaaattttagacaccgcagtaccaatctatcataatgatccatgtgggtcatgatatactctttcaaattgtctatcaatattattcagagatctctagccttgctggtttctttgatgtctgttcttatgtttatattctgcaacagtttctttgatgtctgtcttatgtttatattctgcaacgtaatgcgctgttcaattaaagacactgcacacgattcagtcaattatgttatatggagtgtgcatgattaactagacataaattctgatgactgcatccacatatcttctatcttccattcttttgtattcaccatatttagaatagttgtgtattccttctcagtgtgtccccaagctgtcaagttctcgcgttgcattttctggctatatactacccaagttctttgtattttttctaccaaaatactgccaggctttgtccagcaatgttaaactatattattaaaagaataaaatatttacagaacgattacaaggaaagagaaaggaaaacccaagccaattctaaactatcgtttcctctcacaacacatgaatcggttgcatctcactcccttgtgcaaatgtagcatactgtatatatgacaacagcaactattttgcatatcttggcaggtattgttaataatggtggtgtgagtacagctaatgaacacccagctgctgcagatagttgccagacaggtaataatggttctgaatgggttgagctatttgtcagagagatgacaaatgcatctgacatgggcgatgcgcgtgctcgcgcctcaagagctttagaagttttggagaagtcaatcgtggagcgtacaggagctgatgcagcacaaaacttgcaaaaggtacacgtgtgtctatcttctctagggtgtaaaaaacatcgtagtgtttggtcagcaattcggcatgtagaaaacatgcatcaatgcatgatttaggagtaacaataacattgaatactttcatatttttctttctgtacaggaaaatatgatgcttaaggagcaattgaccgtcgtgctgcgagagaacgctgtcctcaagcgagcggtcgccattcaacatgagcgccaaaaggagttcgacgagaggagccaggaggttcagagtttgaagcaacttgttgtgcagtaccaggagcaactgaggaccctagaggtggcaaccacaatcctatctccttttgcaagtttctttctttttctgcctaacatacatactgatgaagaatctactggggtaaaaaatgctgcagataaacaactatgcgctgacgatgcatctgaagcaggctcagcagaacaactccatccccgggcacttcaatcctgacgtcttctaacttttgccgcaagacggtctgtccagaataataatctctgaagatgtcatgtgttgttggtgggaaatgaataataatctctgaagatgtcatgtgttgtgttgttggtgggaaattgcctactgcctctgcgataggagatcaaaattgtcgtgttattacaccgttgaatttaccatcaaacttgtttagactaaatcaccaggggggagagcttccccacctgaattttgtcattgcatagaggatgaaaagttcattacaacatatttagagtttgtagtggggaggagaaaatttctttccaaacggagactacatgtcggtcttcaatcttaagattctctgcccagagagctgcctcgcggatgcaacgttgcaggcaggatccaatcgagggggtttatttcttgaaaatgacatcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0642900, RefSeq:Os06g0642900