Difference between revisions of "Os06g0660700"

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(Created page with "{{JaponicaGene| GeneName = Os06g0660700| Description = Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19) (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0660700|
 
GeneName = Os06g0660700|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0660700

Description

Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19) (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5)

Version

NM_001064806.1 GI:115469343 GeneID:4341740

Length

3416 bp

Definition

Oryza sativa Japonica Group Os06g0660700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28096567..28099982

Sequence Coding Region

28098384..28098386,28098509..28098653,28098805..28098882,28098978..28099090,28099193..28099296
,28099459..28099774

Expression

GEO Profiles:Os06g0660700

Genome Context

<gbrowseImage1> name=NC_008399:28096567..28099982 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28096567..28099982 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaaggaactgaagagtcttgatgagtcacctccagaagggattaaagttattgttaatgacgatgacttcaccaccatttttgctgatattgagggacctgctggaactccatatgagaatggagtattccgtatgaagctattgttgtctcgtgacttccctcagtctcctcctaaaggattcttcttgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacactgaagaaggattggaatcctagccttggattaagacatgttctgctggtagtgagatgccttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaattgttgcttgagaactatgaggagtatgcacggcatgcaaggctatacactagcatccatgcacttaaacccaagaataagaccaagagcgggactatttctgaatcaaccacagctctaaatgtggatcagtcaaacaatgctgtcagcaagaacacaccattgggtccagcagcattatctacctccactgcaaataaagcatttggctctaatttgcaggatcagaatgctgctccttctgatcctgccttgggagcatcagcagtacccaagaaggatgggctacatgctgtgaaagctccggttgagaagaagaagattgatgcgaggaagaagagcttgaagagactataa</cdnaseq>

Protein Sequence

<aaseq>MATNENLPPNVVRQLAKELKSLDESPPEGIKVIVNDDDFTTIFA DIEGPAGTPYENGVFRMKLLLSRDFPQSPPKGFFLTKIFHPNIATSGEICVNTLKKDW NPSLGLRHVLLVVRCLLIEPFPESALNEQAGKLLLENYEEYARHARLYTSIHALKPKN KTKSGTISESTTALNVDQSNNAVSKNTPLGPAALSTSTANKAFGSNLQDQNAAPSDPA LGASAVPKKDGLHAVKAPVEKKKIDARKKSLKRL</aaseq>

Gene Sequence

<dnaseqindica>1818..1820#1943..2087#2239..2316#2412..2524#2627..2730#2893..3208#ctccccccaaatcgaagagcgcctcctccacgcccctagggtttcctccccctcccccctcgcggcctctcgccggcggccgcccacctccggggatcctctctccggcgcggagcttcctcatcctgcccgtcgcccgccccaattgcccggccgccgcctccgccgctgctgcaagggaatcgcccggcgccgccgttcccccccgatcgtcgtaccgttggctggttgcgtgctgctgcgtcgatctcgtgggcgggtcacccggaggcggcattttagcggcgggactccgcgtggtacgcttccctttgcccttttagcgcaggtaaggcgtctgtttcgtcctgttgatggagatgagatcttgttaagactcgttttatgttgatagtggaggcgagtgtgatcgatcggtcgatctattaatccggaagtacattgcgcccaatctcatctctgagcaggggggacaggacatgtttgtgaattctaagaggactattgttgattaggtttctgttcactagagcgagaagcactccgtgttgttcctgttaaattttctgttcacacatgatgcatgggtgcagggcactggcccctgaatatacttgccctgaataaatatgcaggaattgtatttgcatggtgtggcgggagtgcgcgattgcgcgcgcgaaaactctctgtaagtggagggagcgaggctataaaagttaattggcactttagtagtagttactatttatacgcttgattggtcaagttagtaataaataagcgctcggagatggctcattaccatatttgcaatattgcagtagcatgtgataatgtacgtagcctatttacgcaaaccgccaattctggtttgtggtcttagtgcattgttccagtgttattagcttctcgatgttgcagatactatgttgaagtactccatgtttgcaagtgttactaagtagaacattgcttcctagtgggattaaattactaatttagcacttaaatttacttggtgtgagtgtgcacatgcacttgcatgcgtgaggggacttgtggagagggaaagagttggtatatcagtaggaagtgatgttaaatcgtcgagttggtatatcagtacacagaaatggcttttaggttaagattattgtgcgataacacgacaaatgcaatgtatgataacatcgatctctcctgcatggcatatgcaatgtgttgctatccagtcacttttgcattcatcgtgagtttttatttctaaaaaacaggtgccccagccttgtaccgctaaagccacacaagtggccaattataccggataagcgaccgattatgctgcacaaaatactaaaacgtgggatgactgcacgaaaccacttactgttttttaaaatattcattgtatgtatcattcatagcagtataatctagaaccattaagtgacccctagcacatatagtagttgttcatttgtagtgtattggatataatatttgcttggtgcatgcacaattgcatattactgcaacaatagtttctagttttgcaagccacgttttaatttttggttacctgatacagtcttcattttgctgctccgtagatatcaattgaaatattttgagtgctgtactgtttttttttctgctaatttttttgttcaaacattctatatcaatccaatcacacatccctaactattatctatttattttcttgtaggcttgttttggcgattgatcacactgtagaaatcaaattccaagtgaagttgccaaacaattacctatctgctgttattgcttccatggtaagccatcagaagtatttaataattttgggacctcattcattttcaagagaacaccacttcaaagtagctattctctctttcatgattctaacttctaattgtatgtctgcattaccaaggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaaggaactgaagagtcttgatgagtcacctccagaagggattaaagttattgttaatgacgatgacttcaccaccatttttgctgatattgagggacctggtaatgatatatcaatatatgctcttgtgcttgctttgcaccattctagcacattgttctgctgcttgcagtgcataatagaacccgtattatttttcctgttgtacttcttacaccatattctgaaaatctgaatcttgacttggtgcagctggaactccatatgagaatggagtattccgtatgaagctattgttgtctcgtgacttccctcagtctcctcctaaaggtagctatccctcaaaactttcagtaatgttcttctttagttcttcaagtgaggcatttggttgtaagtctttgaccttcccttttgatttgcaggattcttcttgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacactgaagaaggattggaatcctagccttggattaagacatgttctgctggtaaccagaatcatattattccagtaatgttactttgtaagcagttgctgagctatgatttagcacaacagcgagtaagagttctttcttggcatgtgacaggtagtgagatgccttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaattgttgcttgagaactatgaggagtatgcacggcatgcaaggtcagtttttagcgttgtaatatcaaaccttgattagagctctactggtcaaagaatgccatattaggattgccactgtagcatgctatgttgtttcacttgctaaagtttcatgtggctctgtaattagttactgattatttcatgttgcttcatatccaggctatacactagcatccatgcacttaaacccaagaataagaccaagagcgggactatttctgaatcaaccacagctctaaatgtggatcagtcaaacaatgctgtcagcaagaacacaccattgggtccagcagcattatctacctccactgcaaataaagcatttggctctaatttgcaggatcagaatgctgctccttctgatcctgccttgggagcatcagcagtacccaagaaggatgggctacatgctgtgaaagctccggttgagaagaagaagattgatgcgaggaagaagagcttgaagagactataagtaaaacagccttggaaaaactgaggctgttagttgtagctaataatctagatttcttcataagttccagatcaccagatgcatagtaaaatcgataataatgtgggggcatctgatgcaatatgaaacggcgtttgggttaaacagagaagaatgtgtgttgtgactgttggtgtaccatactgtctgtgcaatatcaattgttcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0660700, RefSeq:Os06g0660700