Difference between revisions of "Os06g0664300"

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(Created page with "{{JaponicaGene| GeneName = Os06g0664300| Description = Similar to Vacuolar sorting receptor 6 precursor (AtVSR6) (Epidermal growth factor receptor-like protein 6) (AtELP6) (...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0664300|
 
GeneName = Os06g0664300|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0664300

Description

Similar to Vacuolar sorting receptor 6 precursor (AtVSR6) (Epidermal growth factor receptor-like protein 6) (AtELP6) (BP80-like protein d) (AtBP80d)

Version

NM_001064833.1 GI:115469397 GeneID:4341771

Length

7576 bp

Definition

Oryza sativa Japonica Group Os06g0664300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28310423..28317998

Sequence Coding Region

28310759..28311077,28312630..28313115,28314145..28314366,28315271..28315359,28315536..28315605
,28315800..28315883,28315987..28316063,28316174..28316255,28316378..28316460
,28316544..28316607,28316781..28316909,28317177..28317280,28317379..28317483

Expression

GEO Profiles:Os06g0664300

Genome Context

<gbrowseImage1> name=NC_008399:28310423..28317998 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28310423..28317998 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggagggcgccatggctcgccgggattggggccgtgccgttcttgatcgtcgtcgtggtggcggtggtgggcgccgccgtgccggcgatggggaggttcgtggtggagaagagcagcgtgagggtgctctcgccggagcacatccgggggcaccacgacgccgccatcggcaacttcggcgtgccggactacggcggcacgctcaccggcgtcgtcgtctaccccgacaagaaggccaccggctgcgccgagttcgacgccaagttcaagtccaagtctcgccgcccggtcatcctcctgctcgaccgtggagagtgctacttcgcgctgaaggcgtggaacgcgcagcaggcgggcgcggcggcggtgctgatcgcggacaacgtggacgagcagctgctgacgatggacacgccggaggagtcgccggagacggagtacatcgaccggatcagcatcccgtccgcgctggtcaaccgcgcgttcggcgagtccctcaagaggatgtcgtcgccgtcgccgtcgtcagaggcggcggtggaggtggtggtgaagctggactggcgcgagtcgatgccccaccccgacgagcgggtggagtacgagctgtggaccaacagcaacgacgagtgcggcgcccggtgcgacgagcagatggagttcgtccgcggcttccgcggccacgcccagatcatggagagaggtggctacgccctcttcaccccgcactacatcacctggtactgccccgaggccttcaagctcacccagcagtgcaagtcccagtgcatcaaccatggcaggtattgtgcgccggacccggagcaggatttcggggaggggtacgaggggaaggacgtggtggtggagaacctgaggcagctgtgcgtgcaccgggtggccaacgagaccgggcggccatgggcgtggtgggactacgtcatggactacaagatcaggtgctccatgaaggagaagaagtacagcaagggctgcgccgaggacgtcgtcaaggccctaggtctgtcgcttgacaaggtgctggaatgtatgggcgatccagaggccgacaccgacaacgccgtcttggccaaagagcaggaagatcagattggccgtggatcgcgaggggatgtgaccatcttgcctactctcgtcatcaacaacgtccagtacagagggaaactggagaggacggccgtgctgaaagctgtctgtgccggcttcaaggagggcactgaacctcgcgtctgcttgagcaatgatatcgagacgaacgagtgcctgcacaggaacggcggttgctggagagacgagaaaaccaacgttacggcttgcaaggacacgttcaggggtagggtgtgcgagtgcccagtggtgaatggcgtccagtacgagggcgacgggtacatcggttgcaaagctgttgggccaggcaggtgtacggtggacaacggaggctgctggtcagagactaggggtcatcagacgttctctgcttgctctgacactgcattgactggatgccgatgccccccgggtttccaaggagatggccacaaatgtgaagatttggatgaatgcaaggagaagcttgcgtgcacttgccctaactgccactgcaagaacacctggggcaactacgagtgcaagtgcaagggcaaccagatctacataagaggagaggacacatgcatagccaacagcatgtcaaggttcggctggttcatcactatattggtggcgtcgtgcgtagccggcgtggggattgccggctatgtgttctacaagtacagactcaggtcgtacatggactcggagatcatggccatcatgtcccagtacatgccgcttgacagccagaacaacgagaaccaaccccttcgacagcatgattcagaggcttaa</cdnaseq>

Protein Sequence

<aaseq>MARRAPWLAGIGAVPFLIVVVVAVVGAAVPAMGRFVVEKSSVRV LSPEHIRGHHDAAIGNFGVPDYGGTLTGVVVYPDKKATGCAEFDAKFKSKSRRPVILL LDRGECYFALKAWNAQQAGAAAVLIADNVDEQLLTMDTPEESPETEYIDRISIPSALV NRAFGESLKRMSSPSPSSEAAVEVVVKLDWRESMPHPDERVEYELWTNSNDECGARCD EQMEFVRGFRGHAQIMERGGYALFTPHYITWYCPEAFKLTQQCKSQCINHGRYCAPDP EQDFGEGYEGKDVVVENLRQLCVHRVANETGRPWAWWDYVMDYKIRCSMKEKKYSKGC AEDVVKALGLSLDKVLECMGDPEADTDNAVLAKEQEDQIGRGSRGDVTILPTLVINNV QYRGKLERTAVLKAVCAGFKEGTEPRVCLSNDIETNECLHRNGGCWRDEKTNVTACKD TFRGRVCECPVVNGVQYEGDGYIGCKAVGPGRCTVDNGGCWSETRGHQTFSACSDTAL TGCRCPPGFQGDGHKCEDLDECKEKLACTCPNCHCKNTWGNYECKCKGNQIYIRGEDT CIANSMSRFGWFITILVASCVAGVGIAGYVFYKYRLRSYMDSEIMAIMSQYMPLDSQN NENQPLRQHDSEA</aaseq>

Gene Sequence

<dnaseqindica>337..655#2208..2693#3723..3944#4849..4937#5114..5183#5378..5461#5565..5641#5752..5833#5956..6038#6122..6185#6359..6487#6755..6858#6957..7061#atcccatttattttttcctctcaaaagatcacaattttttcatcttcttctcgtgatatcctttgttttttttcatccatccatccattcccctttgcacggttgagctcgtctcacagttgttaattaacagcaagaacatttttttccttaaatttctatttaatttatactacttgcgagcgagagccacctaatcttggtgcccaccaagcataagcttcatcatcttcttcttctttgaagtcgtcttcttccctcctcctctcgtcgcctcttggaaagagagagagagagagagagagagagagagagagaggtgatcgagttgcagcaatggcgaggagggcgccatggctcgccgggattggggccgtgccgttcttgatcgtcgtcgtggtggcggtggtgggcgccgccgtgccggcgatggggaggttcgtggtggagaagagcagcgtgagggtgctctcgccggagcacatccgggggcaccacgacgccgccatcggcaacttcggcgtgccggactacggcggcacgctcaccggcgtcgtcgtctaccccgacaagaaggccaccggctgcgccgagttcgacgccaagttcaagtccaagtctcgccgcccggtcatcctcctgctcgaccgtggaggtaggagattgatttcaaacttccaatgattgattcaattagtttgtgcttgttttgatttgcataagtatttttcaagaaatttgtgttccaaagtctgcaagtctgaactgaacaaacttgagaagtagtattagtttttgatgattatttggattttgagagtttggtttggtgatgatttgattccaatgttctaagtcatgccaatttttgttctgttaatgggttgtgtcaatccaatggttagctagtccactgattaaaaaaacaacaaaagaaatggttagcaagagagtatcaaggtaggcatgatggttaagttgtatagtattttaattctttgatgtggattgttgtccaactttagaagtctgaaagattgcattcatatatattttttttattgtggcgagggaagggaatttataattcagttctgaaagcagagttgaacgatggtagaccaaaactttttaatttatttttgaaattgtttgagaactgagatcacttactctgaatcaaattgttttgtttgtttcgcctggaaaaacaagtccaatattgcagaatactacctaacataataccaataactaggacggaatcttagttcagagccattattgaagacatgttaaccacttcttattcactacttataagattcaaacacacacttagtttaattactttcgggattcggctcaactttaagcatttcgacgagtttgttcctttctttccgtcagagtttcagataactctgaaccaaggaaagcgagaataggttcttgatacatatgccgtacatttatccattgcaactttgaattttgaatctcatacctgattcggtatttgatccaaccactgcaacgcacttgatcacaactcctccactaccaatcagcaggtgtctctcaattccttcaagccaaaggcagcactgaacaacctgttcatccttcgtttccaagccactctccatcagattctgaactctgcaccaggacacttttaccatcagattatgaaataggaattgcaaattgacccacttattctgtactaatatactgaaattctcactcaattcagtgcattttagttgcaataaagaagaagcaattttaatatttttaatgcagataatcagcttcatcgtttgaatttttattctttaacttatcagtcaactatttgaattttaaatctttattttaagtatattttggttattttttaccgtaatttatttttcagcattaacttttaaatcgctaagaacatgtatataaaaaatttaccaataaattatttttaatcgctaataaacattatggtttaatttcttttgtcggtgataaccttacatactatgactatgtgggatgtaagtgaccaacccgcgaaatccactgtagtaaatcaaaataaaccacgagcccgtttattttgacctataagtgggcttacgccgggttagccacttacgccccctgtatgtatgtgagcctgacaaactgttccgtttgttgatattcagagtgctacttcgcgctgaaggcgtggaacgcgcagcaggcgggcgcggcggcggtgctgatcgcggacaacgtggacgagcagctgctgacgatggacacgccggaggagtcgccggagacggagtacatcgaccggatcagcatcccgtccgcgctggtcaaccgcgcgttcggcgagtccctcaagaggatgtcgtcgccgtcgccgtcgtcagaggcggcggtggaggtggtggtgaagctggactggcgcgagtcgatgccccaccccgacgagcgggtggagtacgagctgtggaccaacagcaacgacgagtgcggcgcccggtgcgacgagcagatggagttcgtccgcggcttccgcggccacgcccagatcatggagagaggtggctacgccctcttcaccccgcactacatcacctggtactgccccgaggccttcaagctcacccagcagtgcaagtcccagtgcatcaaccatggcaggcaagtgacttccttcgtttcagattataaatcgtttcgatttctttttttttaatcatacttccttcattttatattattattacgtcgttttcacttttcttatatccaaacttaaatttgattaagtttatagaaaaattagtaacatctacaacaccaaattggtttcactaaaactaacatttatgtatattgataatatttttcttttgtgtcggaaatgttgctaagttttctataaatttggttaaacttagactacttataatatgaagtacctcttttttaaaaaatattggacattgttactttttttttacaaacttttgaccattcattttattaaaaaaaattatgcaaataaaaaaaaggcaaaattggttatataacatcgaaagttcacgtttttggttttatagcaccgaaagttaccggttcactttaagaacacccaaagttcaccatgttcccatttttaacacttccgtcaattctcgatcgttttccgtccgtcttgatccagccacacatacgatatgacgtttgtacccctcacaagtataagtataatgtatgtcaatgaggggtagaaatgtcatatcatgtgtgtggcgatcaataacgatcaagacggacggaaaaattgacggaagtgctaaaaataggaacatggtgaactttggatgctattaaagtgaaccggtaactttcggtgctataaaaccaaaaatgtgaactttcgatgctatataaccaattttgcctaaaaaaattaagacatgcttaattacaaaacatttgacgacaaattaagttacaatgaaataaatggtgattacatttttttttcaataaggtgtatgatcaaacacatataaaaaaaagttaacgacgtcatacactgaaaaactgaaaaacggaaagagtatcatagtatcctcttcttcgtctccggtggggacaccatcatgcgccatgaatcgatggagtggttgatcgagctccggtgaggatgggtgcgtgcaggtattgtgcgccggacccggagcaggatttcggggaggggtacgaggggaaggacgtggtggtggagaacctgaggcagctgtgcgtgcaccgggtggccaacgagaccgggcggccatgggcgtggtgggactacgtcatggactacaagatcaggtgctccatgaaggagaagaagtacagcaagggctgcgccgaggacgtcgtcaaggccctaggtgagaatgagatccatggtaccatacattcagtgtgcatatgctcatcgatcagttcatcgttcttcgttacttgctctaatttgccattacacgaaagacgcaccttgagtattatactccctccatcccaaaatgatcatcatatatgcttatgcatcaagatcaaggataatttaaattgcatcaatcaagacatcatatacacattctctcacaatgtatgtatcgattaaaacaccatatcaattacaccctagtatgtacagattctcccatgctatattaattgtattccgatgaaattcatgtccatgcaattatatgatgatcaatttaagaaaatttagatttctttatatgatgatcaatttaaaaaggagggagtattatgcatatcacacgcatgtaccttgagtatgtctacaaagatatagaggccagcaaaaagtacttaaattcactaatgggagtggtttatatttatgacgtcatattttttatcaaaaaatagttaaatcgtttcgtgtatcaaactaaagctgaattgaacacatcttactactataaatctggataaatatgaatactaggatgcgtcggttactatattttagaacggatgtagtatgtgcatatgtaacttttagaaaagatccactttcctaactccatattaaaaacatactgcatatgtaacttttccaaaagatccgctttcctaactccatattaaaaacatatgtgcaattgttcatatgtaacttttaaaaaagatccactttcctaactccgtattaaaaacatatccgcacatgcgtattatctgtagacactataatttgaatttggtgcttttataatagcaaatgttcttttgttcttgacctttttctttccttaggtctgtcgcttgacaaggtgctggaatgtatgggcgatccagaggccgacaccgacaacgccgtcttggccaaagagcaggaagatcaggtatatatgcaaagtgactgaaactatactgttcatggtgtcattaggagaagaattttttttagcgttttaatcttcaggtgtcagagatgttggccagtcacaatctcgcaggtctcttgcattacatgatgtgttaagccattaacgtcggtggttttggtgcctttgatcagattggccgtggatcgcgaggggatgtgaccatcttgcctactctcgtcatcaacaacgtccagtacagaggttggttggcacatctctttcgccaagaatgataattaagaacaaattagttacttgcaaacactgaagctgattagagattcctaacaacaataaaaatagctttctgtaataattaactgtagctctttgagtaaagacatagatgttacattccattattaaaaaaacaaaaatggttgtgaaaaatgaagggaaactggagaggacggccgtgctgaaagctgtctgtgccggcttcaaggagggcactgaacctcgcgtctgcttgagcaatggtgcgtagaaaacgcagagaaacatattgttttgtttcgtggaattctgaaaaattggaatgaaattctaatgaaatctctgttttcatttcttcaactgtagatatcgagacgaacgagtgcctgcacaggaacggcggttgctggagagacgagaaaaccaacgttacggcttgcaaggtactacatggttttatagattaattgtatcatctcgatgtaattgtctgatatcgataaagcttttttaatctgattttttctggcgtcgtgttcacaacaatacgcaggacacgttcaggggtagggtgtgcgagtgcccagtggtgaatggcgtccagtacgagggcgacgggtacatcggttgcaaaggtatagttggtcgataggccatgaaaattctgtaaaattcatgcattccaaaggaacctcgatttcaggctcaccatgttttgaattttaatgtaattgcatgtttgttctttttgtttcagctgttgggccaggcaggtgtacggtggacaacggaggctgctggtcagagactaggggtcatcagacgttctctgcttgctctgtaactctctagccttcacttgcagaaaaacctctcgttgtttgttatgatctttgctaatcactctctgcacaatttcataggacactgcattgactggatgccgatgccccccgggtttccaaggagatggccacaaatgtgaaggtaaacatatttctgaaacttctctgaagaaaaataacttctgaaactgacatattggcatacaattactactggactatcaagtgattgatgggctagtagtggtgggtgtagattaacagaactgatgaaatactgaacaaaattctgtgctccatgtgttaccctttcagatttggatgaatgcaaggagaagcttgcgtgcacttgccctaactgccactgcaagaacacctggggcaactacgagtgcaagtgcaagggcaaccagatctacataagaggagaggacacatgcataggtgataatacatcacataaaaatctactccctccatttcataatgcaagactttctagcatttacccacatttatatggatgttaatgaatctagacacacacgtgtctaaatttattaacatctatacgaatgtgagcaatgttaaaaagtcttatattatgaaacggatgaagatagttccaatttcatgtgacgatggcatgaaacactttgcttttcgacatgaaaatatgaaacatagctaaattttgggtttataatgcagccaacagcatgtcaaggttcggctggttcatcactatattggtggcgtcgtgcgtagccggcgtggggattgccggctatgtgttctacaagtacagactcagggtatgtttttttctaacaagaaaaggaatataattaaactgaaactgttgcaagtatgtgatgttgaaaaagaaaaatgtttgatgtgatttgtgcagtcgtacatggactcggagatcatggccatcatgtcccagtacatgccgcttgacagccagaacaacgagaaccaaccccttcgacagcatgattcagaggcttaaggtaactccagcaatttactcccaaccaatacaattgcacaattgtgccctaaatttaataccagataagctaataagtgatctcttaaaatgtctgtgatctagggacctggccatttgatggagaatttggttagctatataccttgtgaagagattgatacaaagatgggctatgagttcaagggaactagttatggtgatcccagaccatactcagcagatacttaagtgtgcttccaatgattttagcttcatttttgtatagtaaaagaaatggtttgtaccgagccacagtgattgagcaatagagaagtagctaggtaggcatttctgctctcatgtggaacgacatacaatacaatacacacagaatttttagaaaagaaaaatacaggtggcggtgtatcatagtcatagataaccatattaagaaaaatatggatggcggtgtatcaaaaaccataaaataaggtgtttctgtctatttggagttgttttggcatgctttcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0664300, RefSeq:Os06g0664300