Difference between revisions of "Os06g0729000"
(Created page with "{{JaponicaGene|
GeneName = Os06g0729000|
Description = Phytoene synthase 1 (EC 2.5.1.32)|
Version = NM_001065182.1 GI:115470095 GeneID:4342137|
Length = 3937 bp|
Definiti...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0729000| | GeneName = Os06g0729000| | ||
Revision as of 20:29, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0729000 |
|---|---|
| Description |
Phytoene synthase 1 (EC 2.5.1.32) |
| Version |
NM_001065182.1 GI:115470095 GeneID:4342137 |
| Length |
3937 bp |
| Definition |
Oryza sativa Japonica Group Os06g0729000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:31928985..31932921 |
| Sequence Coding Region |
31929345..31929518,31929632..31929824,31929929..31930164,31930762..31930934,31931763..31931813 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:31928985..31932921 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:31928985..31932921 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggccatcacgctcctacgttcagcgtctcttccgggcctctccgacgccctcgcccgggacgctgctgccgtccaacatgtctgctcctcctacctgcccaacaacaaggagaagaagaggaggtggatcctctgctcgctcaagtacgcctgccttggcgtcgaccctgccccgggcgagattgcccggacctcgccggtgtactccagcctcaccgtcacccctgctggagaggccgtcatctcctcggagcagaaggtgtacgacgtcgtcctcaagcaggcagcattgctcaaacgccacctgcgcccacaaccacacaccattcccatcgttcccaaggacctggacctgccaagaaacggcctcaagcaggcctatcatcgctgcggagagatctgcgaggagtatgccaagaccttttaccttggaactatgctcatgacggaggaccgacggcgcgccatatgggccatctatgtgtggtgtaggaggacagatgagcttgtagatggaccaaatgcctcgcacatcacaccgtcagccctggaccggtgggagaagaggcttgatgatctcttcaccggacgcccctacgacatgcttgatgctgcactttctgataccatctccaagtttcctatagatattcagcctttcagggacatgatagaagggatgcggtcagacctcagaaagactagatacaagaacttcgacgagctctacatgtactgctactatgttgctggaactgtggggctaatgagtgttcctgtgatgggtattgcacccgagtcgaaggcaacaactgaaagtgtgtacagtgctgctttggctctcggcattgcaaaccagctcacaaatatactccgtgacgttggagaggacgcgagaagagggaggatatatttaccacaagatgaacttgcagaggcagggctctctgatgaggacatcttcaatggcgttgtgactaacaaatggagaagcttcatgaagagacagatcaagagagctaggatgttttttgaggaggcagagagaggggtgaccgagctcagccaggcaagccggtggccggtctgggcgtctctgttgttataccggcaaatccttgacgagatagaagcaaacgattacaacaacttcacaaagagggcgtacgttgggaaggcgaagaaattgctagcgcttccagttgcatatggtagatcattgctgatgccctactcactgagaaatagccagaagtag</cdnaseq> |
| Protein Sequence |
<aaseq>MAAITLLRSASLPGLSDALARDAAAVQHVCSSYLPNNKEKKRRW ILCSLKYACLGVDPAPGEIARTSPVYSSLTVTPAGEAVISSEQKVYDVVLKQAALLKR HLRPQPHTIPIVPKDLDLPRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWA IYVWCRRTDELVDGPNASHITPSALDRWEKRLDDLFTGRPYDMLDAALSDTISKFPID IQPFRDMIEGMRSDLRKTRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESV YSAALALGIANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFNGVVTNKWRSF MKRQIKRARMFFEEAERGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYV GKAKKLLALPVAYGRSLLMPYSLRNSQK</aaseq> |
| Gene Sequence |
<dnaseqindica>3404..3577#3098..3290#2758..2993#1988..2160#1109..1159#564..999#atagccatagctcatcatccaccctctcttccttccttccttccttccttccacacagaccagaccaggcatcccgacactacacgcagactctcgactttgtcactagcatcattgcttgatgatcgatgctgagctgcaaccaagcaccagcatatcctttccttcattccttcctggtgctggtagaagaagaacaagctagctagagtgataagaggtaattgtttcctccaactcattccaaccttgccttttgcctgccaaactcctcatcctctgccactgcataccatacgtgtgcgcgcctgaatgcctgcctgcctgcctgatactgatacatacacacagcacacacgccccgctattgtaagtgcggccaccactagctgtgtttctgctctctgtgtttatcaccaaattaaagcaacgacactcacttggtctgtttctttttaaaatattatttctcctcctcacctcacacatacctgcatattatttgcagctagctaccttgcagatcgatctccggccagcgattgatcccatccagtataataatggcggccatcacgctcctacgttcagcgtctcttccgggcctctccgacgccctcgcccgggacgctgctgccgtccaacatgtctgctcctcctacctgcccaacaacaaggagaagaagaggaggtggatcctctgctcgctcaagtacgcctgccttggcgtcgaccctgccccgggcgagattgcccggacctcgccggtgtactccagcctcaccgtcacccctgctggagaggccgtcatctcctcggagcagaaggtgtacgacgtcgtcctcaagcaggcagcattgctcaaacgccacctgcgcccacaaccacacaccattcccatcgttcccaaggacctggacctgccaagaaacggcctcaagcaggcctatcatcgctgcggagagatctgcgaggagtatgccaagaccttttaccttggtatgtagtatgtctatcttcttaattttcacccctgccttgcagcgtgccatccattttttcttgccatgcatcatatcatggaattcatgctgctttctcatggcaggaactatgctcatgacggaggaccgacggcgcgccatatgggccatctatggtacttcaacaatcaccatgtcttgctccactgttccattgcttccctaactatgtatcagtaaatattaaaagcggaggtaatttaattttttaattcaaatcatcagatatcccctcacgtttaatatgagttgaaggtcactatatagtactccctccgtttcaaaatgtttgacaccattgactttttaatacatgtttgaccattcgtcttattcaaaaaaatttgtgaaatatgtaaaactatatctgtatatgaaagtatatttaacaatgaatcaaatgatatgaaaagaataaataattacttatattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtcaagtattttgaaacgaatggagtattgaatagtaacctactgtttgagttgaaggttgctgtactacttactatttaacagcgactagcaagacacaaattggtcaagttttgatgtaatggtcagaattaggttattgatgggagttataacagacagaaactttgtcgtcagacttcacttgcatgcgatgcatctgtagatacaaagtcaatgaagaataaagtactaatagtactagtgcatttcttttaaaaccactatctatgcaagcatcacaattggacttgtagtaggctaaatggctccaactgtttcaagacatgtgaaaaaggttgagagaacatgttctctgagatgccaaatgaatatgaatccgtactactaacaatttcaaacttttaaatgagctagttcaggcatgaattttgaaatctgatgtatacctttttttttttgcagtgtggtgtaggaggacagatgagcttgtagatggaccaaatgcctcgcacatcacaccgtcagccctggaccggtgggagaagaggcttgatgatctcttcaccggacgcccctacgacatgcttgatgctgcactttctgataccatctccaagtttcctatagatattcaggtaactagctggtatatgcatatagcgaaaatccaaatgatgtaatactgctagactatattggttgctaatccctatggattccctgcacatcgcaattctagtgcaagaagaatagacctactaagttgacgaccaaatagttgatcggtcaacaatatcatatgacttgtcagccattagtctctgatgccactgttaacttttcacacaatttattgggcttagtccaggactccatgtggccacaatgcacagtattagtctaggaaaaagatcaatccaaggacagatatggtaggacttttcagaacagacaactgatagagcacagcccatcaagtagaatactaaggggaaggccataattcctatgcaattctatggagttgttaacctgaattaagcaggttctatacagaataaaagaacttgctcattatctatgatgacaaaaaaggaaggaaaagttccactgagaattttactgaacacatgaaaacccacaattggaaacttatcatctgtcctttgagtttttacagaccacatggtgtataataatatgactaatcaaatgcaatgcacgtatgccagcctttcagggacatgatagaagggatgcggtcagacctcagaaagactagatacaagaacttcgacgagctctacatgtactgctactatgttgctggaactgtggggctaatgagtgttcctgtgatgggtattgcacccgagtcgaaggcaacaactgaaagtgtgtacagtgctgctttggctctcggcattgcaaaccagctcacaaatatactccgtgacgttggagaggagtaagtgtcaatacagtggttttcactaatggtcataagctgtagaacagaatgtcggcatatatatagttcactgatcctaatacttcattttattttcacagcgcgagaagagggaggatatatttaccacaagatgaacttgcagaggcagggctctctgatgaggacatcttcaatggcgttgtgactaacaaatggagaagcttcatgaagagacagatcaagagagctaggatgttttttgaggaggcagagagaggggtgaccgagctcagccaggcaagccggtggccggtaagaagagtcacttgattctcaaggaaacataaagcagattattattgtcggtgcttctatgccatggtgtcaaaaggaaaataaaatatcattgcattgccccgttgcaggtctgggcgtctctgttgttataccggcaaatccttgacgagatagaagcaaacgattacaacaacttcacaaagagggcgtacgttgggaaggcgaagaaattgctagcgcttccagttgcatatggtagatcattgctgatgccctactcactgagaaatagccagaagtaggaggcgggaagaggagataaagggaagatgatgagcaggttaggcttagataggaaaaatcagacagcatctgccttccgattaatgttgaggaaattatattattgtgtgtatcatacatagcatgtatagggaaaatgctgcaggcaggcaggcaggctaggtgatggttgaatatttccttcacatcatgtatgtatatccttccttgatgctacagcacatatgtatgtatgactctgaagaaagagcaacctgtatagtagctaaccggctatggcctatgtatgggccgcagaggtgagcaaacaaaaatcatcatccatggattgattgattgattgattgatacagtactac</dnaseqindica> |
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