Difference between revisions of "Os07g0131400"

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(Created page with "{{JaponicaGene| GeneName = Os07g0131400| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001188109.1 GI:297725348 GeneID:9269147|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0131400|
 
GeneName = Os07g0131400|

Revision as of 20:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0131400

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001188109.1 GI:297725348 GeneID:9269147

Length

4128 bp

Definition

Oryza sativa Japonica Group Os07g0131400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1676981..1681108

Sequence Coding Region

1676981..1677003,1679344..1681108

Expression

GEO Profiles:Os07g0131400

Genome Context

<gbrowseImage1> name=NC_008400:1676981..1681108 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1676981..1681108 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatttagcctgcttcctcctcttcctaacatccttcaccacggtcagtattggacaggaccagttcatctacaacggcttctccggcagcaaccttatccttgatggcacagccatggtaacaccaaacggaatccttgagcttaccaatggcgcaagtacctacgaaacaagctacgccctctacccgactccatggcaatttctgaaggtaccattacagtccttctcagtcaactttgtgctcttcatggctccttctattagatgtcccgacagcatggctttcatgatatttccgagcaagggcctcaagaatgatcagagggagagcaatcttgcagttaattttttaagttgccaagacaaaaggtttctggagaacaacgagaacgacatcagcatttctatcaacagtagtttcagcagaccgctagagacccatcctgctggcttctatgatgacaagaacggcattttcaatgacttgccccttgttggcggcaaggcagtgcaaatatgggtggactatgatggagaggccacacagatgaatgtgaccatagctcctctcaagctaaccaaacctttgagaccaacgctgtcagcaatcctcaacatctcaacaattttagatgaaggtgtatcatatattggcttctcttccggtgctaataatgtcggtgcattgaattatgttcttggctggagctttggaatgaacagtcctgctccgacaatagatatcatcaagttaccaaagttacctcgatttggcccaaaagtccggtctaaaactttgaagatagtcctaccgatagtcatcaccacagtcatcctacttgtgggagcagcagtcacagcattagtgtggaggcgaaagaggtatgctgaactatatgaagattgggaggttgaatttgggccatatcgcttctcgtacaaatatttatttgatgcaactgaaggatttaacaatgagaaaattctaggtgttggaggatttgggaaggtgtataaaggtgtgcttccagactctaaattggaggttgctatcaagagggtgtctcatgaatcgaagcaaggaataaaggagtttatcgctgaaattgttagtatcggccgcatccgacaccgcaatcttgttcaattacttggctattgcagaagaaaagatgaactcttattggtctatgactatatgccaaatggaagcctagacaagtatttacactgtaaagagggcaagtacacgctagattgggccaaaagatttcaaatcattagaggtgttgcatctggattattctatctccatgagaagtgggagaaagttgtcatccaccgagatatcaaagcaagcaatgtgcttcttgatgctgaaatgaacggtcatctaggagactttggccttgcaagactatatgagcatggcaatgacccacaaacaacacatgtggctggtacctttggatatatagcaccagagatggcgcgcaccggtaaggcatcccctctaacagacgtatatgcatttgccatttttgttcttgaggtaacatgtgggcgaagacctattaacaattacacgcatgatagcccgacaatattagttgattgggttgttgagcattggcaaaaaggatcactgacaagcacactggacgtcagattacaaggagaccacaatgcagatgaggtcaatcttgttttaaagctagggctgttgtgtgcaaatccaatttgtaccagaaggcccgaatacccaatgggtgccagttag</cdnaseq>

Protein Sequence

<aaseq>MEHLACFLLFLTSFTTVSIGQDQFIYNGFSGSNLILDGTAMVTP NGILELTNGASTYETSYALYPTPWQFLKVPLQSFSVNFVLFMAPSIRCPDSMAFMIFP SKGLKNDQRESNLAVNFLSCQDKRFLENNENDISISINSSFSRPLETHPAGFYDDKNG IFNDLPLVGGKAVQIWVDYDGEATQMNVTIAPLKLTKPLRPTLSAILNISTILDEGVS YIGFSSGANNVGALNYVLGWSFGMNSPAPTIDIIKLPKLPRFGPKVRSKTLKIVLPIV ITTVILLVGAAVTALVWRRKRYAELYEDWEVEFGPYRFSYKYLFDATEGFNNEKILGV GGFGKVYKGVLPDSKLEVAIKRVSHESKQGIKEFIAEIVSIGRIRHRNLVQLLGYCRR KDELLLVYDYMPNGSLDKYLHCKEGKYTLDWAKRFQIIRGVASGLFYLHEKWEKVVIH RDIKASNVLLDAEMNGHLGDFGLARLYEHGNDPQTTHVAGTFGYIAPEMARTGKASPL TDVYAFAIFVLEVTCGRRPINNYTHDSPTILVDWVVEHWQKGSLTSTLDVRLQGDHNA DEVNLVLKLGLLCANPICTRRPEYPMGAS</aaseq>

Gene Sequence

<dnaseqindica>4106..4128#1..1765#atggagcatttagcctgcttcctcctcttcctaacatccttcaccacggtcagtattggacaggaccagttcatctacaacggcttctccggcagcaaccttatccttgatggcacagccatggtaacaccaaacggaatccttgagcttaccaatggcgcaagtacctacgaaacaagctacgccctctacccgactccatggcaatttctgaaggtaccattacagtccttctcagtcaactttgtgctcttcatggctccttctattagatgtcccgacagcatggctttcatgatatttccgagcaagggcctcaagaatgatcagagggagagcaatcttgcagttaattttttaagttgccaagacaaaaggtttctggagaacaacgagaacgacatcagcatttctatcaacagtagtttcagcagaccgctagagacccatcctgctggcttctatgatgacaagaacggcattttcaatgacttgccccttgttggcggcaaggcagtgcaaatatgggtggactatgatggagaggccacacagatgaatgtgaccatagctcctctcaagctaaccaaacctttgagaccaacgctgtcagcaatcctcaacatctcaacaattttagatgaaggtgtatcatatattggcttctcttccggtgctaataatgtcggtgcattgaattatgttcttggctggagctttggaatgaacagtcctgctccgacaatagatatcatcaagttaccaaagttacctcgatttggcccaaaagtccggtctaaaactttgaagatagtcctaccgatagtcatcaccacagtcatcctacttgtgggagcagcagtcacagcattagtgtggaggcgaaagaggtatgctgaactatatgaagattgggaggttgaatttgggccatatcgcttctcgtacaaatatttatttgatgcaactgaaggatttaacaatgagaaaattctaggtgttggaggatttgggaaggtgtataaaggtgtgcttccagactctaaattggaggttgctatcaagagggtgtctcatgaatcgaagcaaggaataaaggagtttatcgctgaaattgttagtatcggccgcatccgacaccgcaatcttgttcaattacttggctattgcagaagaaaagatgaactcttattggtctatgactatatgccaaatggaagcctagacaagtatttacactgtaaagagggcaagtacacgctagattgggccaaaagatttcaaatcattagaggtgttgcatctggattattctatctccatgagaagtgggagaaagttgtcatccaccgagatatcaaagcaagcaatgtgcttcttgatgctgaaatgaacggtcatctaggagactttggccttgcaagactatatgagcatggcaatgacccacaaacaacacatgtggctggtacctttggatatatagcaccagagatggcgcgcaccggtaaggcatcccctctaacagacgtatatgcatttgccatttttgttcttgaggtaacatgtgggcgaagacctattaacaattacacgcatgatagcccgacaatattagttgattgggttgttgagcattggcaaaaaggatcactgacaagcacactggacgtcagattacaaggagaccacaatgcagatgaggtcaatcttgttttaaagctagggctgttgtgtgcaaatccaatttgtaccagaaggcccggtatgcgtcaagtcatgcaatacctcgacaatgagatgccacttcctcggttgatgcccacaaacttgagttatagcatgttgggatatttgcaaaacgacggtttcgaccagtacaaatctgtgccatctacagtttgcagcaacaacctgacatcgagcctcacgagtggaagatgatacaaatggatgggattcccagtagtgattgtctacttgtatgaacatattgtagctttattgtaagctggtgttcccagccttgtagtaatgttgctttcttaacaaaatcaggacccagaaggtttttttcaaatttgtggatgctcactgtaaattatttattattctatgaaacggggaaggaaaagtaaatattagctaaccaaaaaacgaaatcaacatccttgttcactccatatttctgttcttgtgctgttttagttgtcttgaagtttcctttcatgcatattacttggccagttcaaccaaaattatgttaaatctgttactgtggctgaactgattttagtcgaacgtgggatggccacgtttgcatgtaatttcccctagttttgggtatgaatagaaggagaagagaatcccggaaaagctgcagcgagatcgccgaacaaactgtctttgattctctgtttttacttcagcttcgtcagagttagcctttgtcggtccgacaatgtgcagagagcgtgtgagctttagaattcaagcattttcagattgtgttccttatttatttctcacaactatcagagttgatacttgattgttgtaactgcaggcaaccactcaataaagcacaacctttggtgaaaattaaaagattatacttttccgaggaaaataatatgggatattggttagattactaccagccattagccatattataagaaccacatattagagtcctcgtcgaggcaaatacaaggcaggtattgattgcattggcaactggcaacctctgtcaagcacacataagaaatcttgcacataatttgatagataggattctccaaatgcagagtaaaacaaccacaattaactttgctttcttaaatttctataacaatttttaccttagtttcttgtctcacagtcatgtttcttgcatgctaggtagcactatttcacatataaacagttggaggtaactcatggtacttttgataaaatagtacctcgaatttatcaaaatggagggaattaatttggtttataatggaaaataaatctgtatatgatttgatagtatgattaataaaaacctaattcaacaaattcagttatttagtgtgtcttagtgcttgtgccaaagatctcaattaaatctctccctatgaccatcccaatctcgatccaaaaattaccatcgaaatgaaaatcactagtttcgaattataaaatcggtgtatccctcctaagttgctcacagaattcctttgaaattctaattcaaaatctagtttaaaatcccaaaatttttccctaaactcagtttttaaattttcaaatcaaattcaaaattgcctttgaaatttcttttcctaccaaaattgtttttctccaaaaatcaaaattcctgaattttctaaaatctgaatatcgtcaaaaactttaagacattctttctggaatttacccttagttcctggaattcaaagttaaaatttgaattcctaattcaaatcctagcctgatatcaatattattaaggagggtgagcatatgtcttggagagtcgaacacgcactgcaagcgaggacgctgaccacacaggagaacaccatgaactgatgaaggagcaaagaggtgatcaatccaggggcatggtatcgtaggggttgctccatatatatcgtgctcatgaggttttggatttcgggagagatgccaggtgctatagtacttgagcaggtccggccggccgtcatcatggaaggatatactgtagtctgttttgccttgttcggtgcttgtttatccactttcttttcttttcttttctttttttgctgagttgtgcatgctttggttgttttgttgttatgtgaatgattgtgtgggtgaggcatcactgtctcagcctcttggtgtgttgctctccttgcacctccaccctctggtctcctctccttccaactgtttagagttattttttttctctttataataattttgtatctcgtcacaaatagagctttcatgaatgctatatctaggccttcatgcaaatagttagcatatttagaatgctgcatatattcatttagttcgttctatgacaactcaaagtcaaattaatatatcactactgcagaatacccaatgggtgccagttag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0131400, RefSeq:Os07g0131400