Difference between revisions of "Os07g0139400"

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(Created page with "{{JaponicaGene| GeneName = Os07g0139400| Description = UDP-glucose 4-epimerase family protein| Version = NM_001065394.1 GI:115470520 GeneID:4342364| Length = 3322 bp| Def...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0139400|
 
GeneName = Os07g0139400|

Revision as of 20:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0139400

Description

UDP-glucose 4-epimerase family protein

Version

NM_001065394.1 GI:115470520 GeneID:4342364

Length

3322 bp

Definition

Oryza sativa Japonica Group Os07g0139400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2112213..2115534

Sequence Coding Region

2112886..2112949,2113232..2113359,2113467..2113580,2113677..2113784,2113914..2114005
,2114079..2114220,2114297..2114397,2114490..2114619,2114775..2114919
,2115034..2115275

Expression

GEO Profiles:Os07g0139400

Genome Context

<gbrowseImage1> name=NC_008400:2112213..2115534 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2112213..2115534 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcccaccaacaggaacaggccccagcagaggcctgccagatcttggtatttcatctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctcatggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccataggaggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcggcgctggatatatcggttcgcacgctgcgcttcggctgctgaaagattccttcagagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttcttcagaacttgttttcagagcctgggcggttgcagttcatctatgctgatttaggcgatccaaaagctgttaatagaatatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggtgagagcacacttgagcctttgaggtactatcataacatcacctcaaacactttagttgtgctagaggctatggcagcacacaatgtgagaaccctgatctactctagcacatgtgccacctatggagaacccgagaagatgcctatcaccgaaggaactccccagtttccgatcaacccatatggtaaagccaagaagatggcagaggacatcatcttggatttttccaaatccaagaaggcagacatggctgtgatgattctaagatacttcaacgtcattggttctgaccctgaaggaaggcttggcgaggctccaaaacctgaattacgggagcatggccgtatatctggtgcatgctttgatgctgcactggggataattcctggtttgaaggttaaaggtactgactatgaaacacctgacggtacttgtgtaagagattacatcgatgtcactgacctcgttgacgcccatgtgaaggcgctcaacaaggcggaaaggggcaaagttggcatatacaatgttggcacaggcaaaggtaggtcagtgaaagaatttgtcgaagcttgcaagaaggcaacaggagttgacatcaaggtcgactacttccctcgtcgacccggtgactatgccgaagtgtacagcgatcccgcaaagatcaacagcgagctgaactggactgctcaacataccgatctcctggagagcctcagggttgcctggacatggcagaagaagcaccggagcggctacggaccccctcaggccatggttttgtga</cdnaseq>

Protein Sequence

<aaseq>MLPTNRNRPQQRPARSWYFISDMDFSDPKRKPRYLSKILMVALL TAMCVVMLTQPPCHRRTPSVFSIHEPGVTHVLVTGGAGYIGSHAALRLLKDSFRVTIV DNLSRGNMGAIKVLQNLFSEPGRLQFIYADLGDPKAVNRIFAENAFDAVMHFAAVAYV GESTLEPLRYYHNITSNTLVVLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFP INPYGKAKKMAEDIILDFSKSKKADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGR ISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGI YNVGTGKGRSVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSDPAKINSELNWTAQH TDLLESLRVAWTWQKKHRSGYGPPQAMVL</aaseq>

Gene Sequence

<dnaseqindica>674..737#1020..1147#1255..1368#1465..1572#1702..1793#1867..2008#2085..2185#2278..2407#2563..2707#2822..3063#ctcttcttcttctcacttcatcaacaacctcacctcgcctcgcctcttctcgcggccaacgagagagggagagggagagctaggaccaccgccactgcctcgggaagtaggtggctcccctgctttccctcctctcctccgccgtcgccgaggcagccagccaagtcgtcccagcaggtggtaggctactagtccgggtaagtgttaaagctcacctttcttttcctctgatctgcttcgccgccattgctatcctgaacgagttctggtaagctaggtgcgaagctaccttcctcttcttcttgctgtttcttttctttctttttcttttcttttccctttttcttggcggcttaatttacgcgtgttcgctgcaatttcatcgctccatccatccatccatgccagcgccgatgctgctttcttttcgctggtgaattagctgtaattaaatcagattgaagttgcgtgtgtgtggttgttggatctgctgctcctgcgacccgtggccgcgtcgtgtgtgctgtcctctcgctgattctgacgagattttcttcctcgatgccgctgtaggtggccggcagtgagcaggaggaatcatctctggcgttcttgtctccgaggaactttgattctttctgggaggggatttggtgtgctgctgctgctccagatgcttcccaccaacaggaacaggccccagcagaggcctgccagatcttggtatttcatctcaggtctgtctgcttccttccatctcaccctatcttactgataaccttgtctctttctctcttttttctgaattagttgataattgttggttcatgtaattggatagctctaaaattatctgcaagtgccttttgattgtctcatagttgggtccagttgttgcttgtgcaacaggaattttggtttttttatggtttgagctctgtaattttagtcctttgctagaaatattttttccccttgttgtacatgcctctgaatttgagctcatcatgttgtgccagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctcatggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccataggaggactcccagtgtggtaactcaatttcagatgtttttcagcagctctgtatgttgccatgaacaattcatggtcaggcagctaacatttgtcttcactcttcacttgtgtgatgtgtccagttctccatccatgaacccggagtcacgcatgttctagtgacgggcggcgctggatatatcggttcgcacgctgcgcttcggctgctgaaagattccttcagagtcaccatagtggtacttcttcgcgactttgtgttgccatttcttcctcgaatttggtgttgttgtagtgcaatttatggaatgcttgtgcctatatggtttctgcaggataatctttcaagaggaaatatgggggcaatcaaggttcttcagaacttgttttcagagcctgggcggttgcagttcatctatgctgatttaggcgatccaaaagctgtatcctgatttatttctctgaataactcaaatcgaatttttctgtagagatatatctttcattcaaaatgcggcaaaatatgatgaaggaattttttgaaagatcttttttccttagcacatgcttaggttaatagaatatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggtgagagcacacttgagcctttgaggtactaaagtctctattgtccatcaaattacctctccacaagacacacgagatactgaaaacattttaaacaggtactatcataacatcacctcaaacactttagttgtgctagaggctatggcagcacacaatgtgagaaccctgatctactctagcacatgtgccacctatggagaacccgagaagatgcctatcaccgaaggaactccccaggtcagctgttgcttctgcatcctctttactttcagataatgctgaaggcttttgctcaccaaatcctactgtacagtttccgatcaacccatatggtaaagccaagaagatggcagaggacatcatcttggatttttccaaatccaagaaggcagacatggctgtgatgattctaaggtatgtaccgtttacaaaacaaaagcatgaaacccactatttaaaccaccatttgattcctgacttacgaatatgtaacctaatacttctagatacttcaacgtcattggttctgaccctgaaggaaggcttggcgaggctccaaaacctgaattacgggagcatggccgtatatctggtgcatgctttgatgctgcactggggataattcctggtttgaaggtacatcttcactcccagtatttcaattattacattcaagaacagggtgccctgattgctgctagcatagcctattgcttactcattgagattcacatttataaggattgcttagcttttagtggattgctgattaatagcattttccattacaggttaaaggtactgactatgaaacacctgacggtacttgtgtaagagattacatcgatgtcactgacctcgttgacgcccatgtgaaggcgctcaacaaggcggaaaggggcaaagttggcatatacaatgttggcacaggcaaaggtcaagatcgtattctattatgatcataagttcattataagggaaaacatgaatgcaaactcattttcagcatcttaattagctaacatatgttcattccacttggctgttcaggtaggtcagtgaaagaatttgtcgaagcttgcaagaaggcaacaggagttgacatcaaggtcgactacttccctcgtcgacccggtgactatgccgaagtgtacagcgatcccgcaaagatcaacagcgagctgaactggactgctcaacataccgatctcctggagagcctcagggttgcctggacatggcagaagaagcaccggagcggctacggaccccctcaggccatggttttgtgaagagaatttaccctgtagcatctattggctgaaaacttaaaaacttaggtggatatattcttaggaatgttcatcatcaagggctttcaattgctcactcacagaagttatatgtaatatagcgcttatggtcattcgttcaattcttgagattcatattatgggaggattttagaagattgtaatattgttgatgtattcagtatacaataaaaatccaacaagctatcctcagaattgttatcctggttggtttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0139400, RefSeq:Os07g0139400