Difference between revisions of "Os07g0231900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0231900| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001065772.1 GI:115471276 GeneID:4...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0231900|
 
GeneName = Os07g0231900|

Revision as of 20:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0231900

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001065772.1 GI:115471276 GeneID:4342779

Length

5043 bp

Definition

Oryza sativa Japonica Group Os07g0231900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7356431..7361473

Sequence Coding Region

7356823..7356852,7357002..7357079,7357373..7357444,7357511..7357600,7357669..7357783
,7358509..7358639,7358717..7358992,7360147..7360283,7360368..7360502
,7360958..7361339

Expression

GEO Profiles:Os07g0231900

Genome Context

<gbrowseImage1> name=NC_008400:7356431..7361473 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:7356431..7361473 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttctccaagtcgaagaagctctgtgcccctccctcttccagaccccagcagcagcagatcagaaacgagtgccgtgaggagcgaaggagatgccgctgaggagaaatctgaagaacagagaccgggaagaagaagaagaaagaggaagcagcgaggaccgacacgcccgactatcgcgcttcttacggaagaagcgaagcagaggctgctgagggcagaggggcagacttcgcccggaacaactgtctcaccttttgctcctgcaccccgtcgtcctcaatacccgccattcccagaggatggcaatgttgaggatgtgcgcaagtggaacgacgagtgccacgaggtcagtaagatcatcaagaaaattgagaaagaacgtgataaagatatccctatcaagactgagcccaaggacccatacaccaccgaggccatacagagctcaagagacaaggtggtggttttgcaggcggcacgcgccattgtcagcatttcgcacatcatggatgatgggcagaggcgaccacaatgtactggcattattattaaacaatggtctgatgacactgggcatcatcatgctaccatagtgacctattctaggatcgtatgcgaagcgggtagaaaacgtgatcccttacccaagctatctgtttgcttaccgaacaagaagactgtcttggatgcggagcttatctacttcaatgatcattatgacattgccctattacatatcaatctagaagttaccatggagctcccatcttttggacgtggcccagagtatggtcaagaagtttttgtgttggctagggatggagaggcatccttgagggctaggcgaggagatatccaatggttagaagaatcagatattttagggcgtgaccactacatgtttctgagctgtgacatccctgagggtgggaatgaaggaatggtgattgacaatgatggtgtagttagagggatggcaatctattgtagcccctatcctgctgttacttcaatttctactattgtaaaatgcattgacatgtttatgcagttcaatcaggttgctcgccccctttttggtattggtgtcagaacaatagcgctgttggatgtgcagcttcaggaggatatcagtgactttggcatcaagggtggtttccttgtagatagggtgtataatcctgtcgccgaggatcttgggataaagcgtggtaatgtaattacttctataaatgggaagggtgctctaacgttacctgagctggaagattatcttctattacttggctggggttatttggaggacaaactaaattgcattaaagatatcaagcttagagtttgtgatctcaagagtggtgtggaaatagatgtcacactgcctgttagattctatgataaatctgagaggaaattacgtttccgtcatgatgaagactga</cdnaseq>

Protein Sequence

<aaseq>MSSPSRRSSVPLPLPDPSSSRSETSAVRSEGDAAEEKSEEQRPG RRRRKRKQRGPTRPTIALLTEEAKQRLLRAEGQTSPGTTVSPFAPAPRRPQYPPFPED GNVEDVRKWNDECHEVSKIIKKIEKERDKDIPIKTEPKDPYTTEAIQSSRDKVVVLQA ARAIVSISHIMDDGQRRPQCTGIIIKQWSDDTGHHHATIVTYSRIVCEAGRKRDPLPK LSVCLPNKKTVLDAELIYFNDHYDIALLHINLEVTMELPSFGRGPEYGQEVFVLARDG EASLRARRGDIQWLEESDILGRDHYMFLSCDIPEGGNEGMVIDNDGVVRGMAIYCSPY PAVTSISTIVKCIDMFMQFNQVARPLFGIGVRTIALLDVQLQEDISDFGIKGGFLVDR VYNPVAEDLGIKRGNVITSINGKGALTLPELEDYLLLLGWGYLEDKLNCIKDIKLRVC DLKSGVEIDVTLPVRFYDKSERKLRFRHDED</aaseq>

Gene Sequence

<dnaseqindica>4622..4651#4395..4472#4030..4101#3874..3963#3691..3805#2835..2965#2482..2757#1191..1327#972..1106#135..516#tcgtcctccgtcccctgctcgtcctcttcggcaagccgacaaatctgccgccggcgccgccgcatcctccttcaggccctctcccgcgcgccaagttggcaaggccggtcgtggtgctgccccccgctgatcgaatgtcttctccaagtcgaagaagctctgtgcccctccctcttccagaccccagcagcagcagatcagaaacgagtgccgtgaggagcgaaggagatgccgctgaggagaaatctgaagaacagagaccgggaagaagaagaagaaagaggaagcagcgaggaccgacacgcccgactatcgcgcttcttacggaagaagcgaagcagaggctgctgagggcagaggggcagacttcgcccggaacaactgtctcaccttttgctcctgcaccccgtcgtcctcaatacccgccattcccagaggatggcaatgttgaggatgtgcgcaagtggaacgacgagtgccacgaggtcagtaagatcatcaagaaaattgagaaaggtttgttagtttgcttctgaattttctttttccagtttcgctatttatttatcaatcgtctaagattttgcaaatccccaatttgggttcgggatttagggtttggtaggatcgagcacatgtctatattcatatgtcacttgatccaactttgttactccaatttatgagtattagctgaatacccgcgtgttgcaacagaaatttaaaaataaaatcttataatgcacattttagaggggcttttaactatttgccactcttacggatgttgcttaacgatttgccactaggcccacatgtcatagacacatgagggcccacatgtcatagacacatgagggcccacatgtcattgacaagatgtggcaaatcgttaattgccatgtcacaagagtggcaaatagttaaatttccccattttagaagccctaaataaatttgttttctttcagaacgtgataaagatatccctatcaagactgagcccaaggacccatacaccaccgaggccatacagagctcaagagacaaggtggtggttttgcaggcggcacgcgccattgtcagcatttcgcacatcatggatggtatgatttagtgacaaaataatagcaagattcatccaatctattcctctttagatgattacagcatcatacctatgtttgcagatgggcagaggcgaccacaatgtactggcattattattaaacaatggtctgatgacactgggcatcatcatgctaccatagtgacctattctaggatcgtatgcgaagcgggtagaaaacgtgatcccttacccaaggtacaaaactttcctttcactatagtgcttgcaggctctatgtagcttttcattctgttcttcttatgatgagtagcccctccacatgtatggggtagcttggtttagctacctagagcatgctgcattttaggcgaaaaattttccttgaatggtgcatattcattgtgcaagtgtgtgtttcaatgatggcttaacatccaattatattaatgtttcactattgtttttagtagccctagatgtttctttttaccttcatgttttagtagtatttcggtacacttgccctacctgttcatttctgaatttttcttcctagccccattgttttgcttatggctatgcttaggccctctttgtttaggcttaggcttattggcttagacttttaagtcagcttattggcttatatgatttataagctagtgaatttaatgtcctaagtttagtggtggagtcatacggatatctcatataagccaaaaaagcttctccaacctagcttttggcttaatagtggcttatggcttcaaaaaagccaaacgaaaaagctgcttgtttgtttaggcttagactttttggcttataagttggcttataagcctaaacaaagagggccttatttgtacggcttattagcaacccaaaaataatttgtaggtaatttttttacatacatgtcgttagcgatttgaaagtatatgttgtaaaataaactatgatgaaaaaactttaaaatcatctccaaaattaagttctaaaaattcaaaatttggattaaaagcatgagcataaatgaaacgatagggccatatcctcacagaggttgtgctgtccttttgattctgcctgcaactgcttgcagattctctttttccttttacattaagcgaatatttgtacctcagttttcatcctatagtgctcttaaacttgttccatggccttgttgtgatatttcaacagtatcaggtcttgttgcctttgccacattacaacatcatcagctcagcttgaccatagctagggtttgtccattctggagtccttgtttttgtggtgcttttatgaccaactgttatttaatcttgaacgttgcatgcggctttgctatttaactatatctgatcaacatccatcttaattttcagctatctgtttgcttaccgaacaagaagactgtcttggatgcggagcttatctacttcaatgatcattatgacattgccctattacatatcaatctagaagttaccatggagctcccatcttttggacgtggcccagagtatggtcaagaagtttttgtgttggctagggatggagaggcatccttgagggctaggcgaggagatatccaatggttagaagaatcagatattttagggcgtgaccactacatgtttctgagctgtgacatccctgaggtaataattttctttctttgtattttattattattgcttaattgcttatttaattctgtagtatttctttgatgcagggtgggaatgaaggaatggtgattgacaatgatggtgtagttagagggatggcaatctattgtagcccctatcctgctgttacttcaatttctactattgtaaaatgcattgacatgtttatgcagttcaagtaagttggctttttcagtcatccaatctatgatcctcacattagaacttaattgatctctatctactgaaataaatggaattatgcttagtgaatcccagaattgaatgtgtgtactggctggtggcattgctgccatcgcttgcatgctagtgtggataagtttcagtattagatgtataaacctggtatgaaatgctaactatgcattggcatgtttatgcagttcaagttggcttttttcagtcatccaatctatgatcctcacattagaacttaattgatctctatatactgaaataaatggtgttatgcttactgaatctcagaattgaatgtgtgtactggctggtggctttgctgccatcccttgcatgctagtgtggataagtttcagtattagatgtataaacctggtatgaaatgctaacttctggtaaacgtcgagttcagtgtaagattaagtacttaagatttaagttctcttggggctgatgtttcttgtaatcaaatctaacatgtggaacgattatgtactagaactaaatcgtattcttacgccatctcttggaatgctgctagaattttaggataacctaatgtatctagtcaatgtgccatttaggataataaaatggtattataagggtggttctaccattgtcctggcatgaaaatgtttgcagttcaattttttttactatcaacttgtcaacttttctcagtcaggttgctcgccccctttttggtattggtgtcagaacaatagcgctgttggatgtgcagcttcaggaggatatcagtgactttggcatcaagggtggtttccttgtagatagggtaattaaggctgttcagtatctgtatgcattgtggatgctattgtaattttttttttttgtctttaggtgtataatcctgtcgccgaggatcttgggataaagcgtggtaatgtaattacttctataaatgggaagggtgctctaacgttacctgaggtgaagagaaacatcagtcaatcttgatgcaaatgccgtcgctaaatgttaaaaatttatgtgcagctggaagattatcttctattacttggctggggttatttggaggacaaactaaattgcattaaagatatcaaggtatgctcaggaggtggattagtgtatagtacaacccttttgggattcattactgtattatggattagaggtattgtggattagagtattgtggatggattagaggtattgtggattagagtattgtggattagagtataggacaatcccaaaatgtcgtgtggattagagtataggacaacgcttttgggattcattactgtctttaaacactaaaatacttataagtcaaagtttggtattagtaattgaaaataaggacaaaaatactaacgcttattcttttttatcagcttagagtttgtgatctcaagagtggtgtggaaatagatgtcacactgcctgttagattctatgataaatctgagagggtaagtccttaacctaatgctgtggttttgagaatactatatttcacttccacaaaaaggaacatttttaggttttgagaatactatatttcacttccacaaaaagggacattttttctaaaatagtattcttttttctggcacacaagaaattacgtttccgtcatgatgaagactgataggataggatgggctcagatgacacctcgtagtgccatggcttctggtaactttttctcccactcttatttccaggtttttctccccttaatagtttaattgcaatagttattcatattgcatcgatcaataatgatttttctcatcatttaattgcagagcagtctggatgttttgcttgtgttctgtcatgctgctgatactagttgcaaggtggggagattgttgtagatttgtcctttggtctatccatcaagcgatataatttggttacacagtagctttaatgtaaaatggggttctgaattcttttttttttctaaatatttttagcagaccagtatttttatccttggttcctgagtgcgaatgacggcagagttagtcgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0231900, RefSeq:Os07g0231900