Difference between revisions of "Os07g0249200"

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(Created page with "{{JaponicaGene| GeneName = Os07g0249200| Description = Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein)| Version = NM_001065826.1 GI:1154...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0249200|
 
GeneName = Os07g0249200|

Revision as of 20:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0249200

Description

Similar to Vesicle-associated membrane protein 724 (AtVAMP724) (SYBL1-like protein)

Version

NM_001065826.1 GI:115471384 GeneID:4342836

Length

3258 bp

Definition

Oryza sativa Japonica Group Os07g0249200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8320052..8323309

Sequence Coding Region

8320205..8320472,8321549..8321690,8321773..8321893,8322784..8322846,8322934..8323086

Expression

GEO Profiles:Os07g0249200

Genome Context

<gbrowseImage1> name=NC_008400:8320052..8323309 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8320052..8323309 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgccgccggggaagaagggggaaggcggcggcgatggcggcggcgggaaggcggagtggctgatctacgcgttcgtggcgcgcggcacggcggtgctggcggagtacaccgagttcaccggcaacttcccggcgctcgcggcgcagtgcctgcagcggctccccgcctcgggcggcggcggctccggcggtggcgcgccggcgcggttcagctacgcgtgcgacgggcacaccttcaacttcctcctccaccgcggctacgcctattgtgtagttgcaaaggaatctgtcccaaagaatgtctcggtggcttttctagaaaggttgaaagatgacttcatgaagagatatggaggtggtaaagctgatacagctcttgcaaaaagtctgaataaagaatacggaccagttataaagcagcacatgcagtatgttcttgatcattcagaagaaatagagaagacattgaaagtgcaagcccaagtttctgaagttaaaaatatcatgttagaaaacatagagaagactttgggtcgtggagaaaaactgagtgaacttcaagataagacttccgatctacaaagtcaggcccaggaattcaaaaagaagggagtgaaaattcgtaggaagacatggttgcagaacatgaaaatcaaattggtggttcttggaattcttttgcttcttgtaataatcgtatgggtgtctgtttgtcaagggtttgactgcaccaagcactga</cdnaseq>

Protein Sequence

<aaseq>MASPPGKKGEGGGDGGGGKAEWLIYAFVARGTAVLAEYTEFTGN FPALAAQCLQRLPASGGGGSGGGAPARFSYACDGHTFNFLLHRGYAYCVVAKESVPKN VSVAFLERLKDDFMKRYGGGKADTALAKSLNKEYGPVIKQHMQYVLDHSEEIEKTLKV QAQVSEVKNIMLENIEKTLGRGEKLSELQDKTSDLQSQAQEFKKKGVKIRRKTWLQNM KIKLVVLGILLLLVIIVWVSVCQGFDCTKH</aaseq>

Gene Sequence

<dnaseqindica>154..421#1498..1639#1722..1842#2733..2795#2883..3035#cagtccagtccagtccagcgcactcctcactcaacaactctccctcgatactctccccccgcaccaagaaaccacggaatcctcctcctcgatccctcccaatccccaatcccagcatccccgagatccgcctcccagcgcgatcccaacctcatggcgtcgccgccggggaagaagggggaaggcggcggcgatggcggcggcgggaaggcggagtggctgatctacgcgttcgtggcgcgcggcacggcggtgctggcggagtacaccgagttcaccggcaacttcccggcgctcgcggcgcagtgcctgcagcggctccccgcctcgggcggcggcggctccggcggtggcgcgccggcgcggttcagctacgcgtgcgacgggcacaccttcaacttcctcctccaccgcggctacggtgagacattgcggcgcgacgtgtcggccaatgccttttgatctgtcgcggtttgatcaccactactagtagtagtgttctttcagtgagttctttagctgttgctaagaatgttttagggggtataaagttttgatcctcatagctgctgcatctaaaccagttgtagatcatagctgggcatgcatacgattaatccgctgcggtaaattcaatcaaaatctttattaaggttgcagacatgccggatcgaaacgaaactatacgagaagaaaataaaaaggcatttctagattaacaaatttaggaagcaatgttaagtatgctaccatgctccagaaggagatagaatccaacgtttactgtattgtggtatagacggaatcatgtttgcagattaattaccgagaaaagggtgcatatgaaaaatagcagcagcaattagtaatagggatgtggataaatgcctcgaattagtgggatggaatgatattgatttcaatgtaatgtgggcaattttctcttcgattgtgctggcttagagggatatcccttcttcctatatagttggtacccactagaagacttattgctataaagcttacaccacgttgcgccatgtcgtcctttttttcctgagccgttggattgtctgcatgtctctgggtcgacattagatcgacattcaacaatattgggccagcccactcatgggcctctgtattagtacaaggaattaactaacttgcctctcataaaccagaccatgagacactaaccctgctgttgcaatactgctctcttggttaccagttaccaccatcatgatgtccttcttccttgatatgatggtctcatggatgtgaggagccctttttattctcacattaacaaataaaatgccatcatcctattgccacaaaaggtttacttctcaattatcaaccatgtttgtccatagtcttgcatgggccattttatactgaactttgtactgttatgtctacatagtataatatccagatgttgacatagtcatggtaacactaacaccttttcctatgcacattttgcagcctattgtgtagttgcaaaggaatctgtcccaaagaatgtctcggtggcttttctagaaaggttgaaagatgacttcatgaagagatatggaggtggtaaagctgatacagctcttgcaaaaagtctgaataaagaatacgggtatgtctgttataagtacttcagaaaattacagagaatgtaattttgcttttgtgctgaaaatttagcattcttactgcagaccagttataaagcagcacatgcagtatgttcttgatcattcagaagaaatagagaagacattgaaagtgcaagcccaagtttctgaagttaaaaatatcatgttagaaaacatagagaaggtatacttcattccttcccctcgtctttgtactcgaagagcatatgatgcttgtggctttgtgttgttttgttcataaatttgattggtaaaccatgaattcctaacacaattatatgttgaattgcttctggtttagattactcagcgctatcgctatgtgagtgttattaatacagaagacatcatctctgacaaaaagtacatttatcttcagtaaaaagatcaaattcaaacttttcatgcagtcatactacagttgaactattggagtgaatgcaaattaaattgtgctaggtgtggtccacatttgcagttggttgccctctgttttttaccgagttaatcttaatgggcttcctctttaaaaaggtcatgtaagtagtattatgtttgcaactttgcatcctctcttggacaaactgaagcatgctcgttccgtttctttgaggtacacttgctcatgatttaccagccaaaagaaaagtaatttatggtacagtttcatgctagttggatagcaagagtacaagacaacacacaacattatgatagctattacacttgctttagtttcaagtgttggagatctggacatcaggatagcaaggtgccatctgccaaagctgatatttacccttttataatcttatattaattgctcaagctgtgtgctttacatattaagaattttgttttgcttggttctatctgaacgcaagacctggaatgtaacaaatagaaatgtcgcgttcttttttttttttaatttaagaaaagggaacattgtggaatcatcaacggtttagcagttttggtgatgccttgaattaagctatcttcatccattattacagtctgttcatttatgcttctttgtggtattttcagactttgggtcgtggagaaaaactgagtgaacttcaagataagacttccgatctacaaagtcaggtactcaagccgtctgttctatttgctgctttgcatagatcctatggcatatacataatcaatgtccatttcttttatgtaattcaggcccaggaattcaaaaagaagggagtgaaaattcgtaggaagacatggttgcagaacatgaaaatcaaattggtggttcttggaattcttttgcttcttgtaataatcgtatgggtgtctgtttgtcaagggtttgactgcaccaagcactgaaagtaactactatcctactgtcggtatagctctgctatataatagtttggagacgtgagattgtgtcggtgaaatcaagtgcattattgactctttggcttgatttctgctgcacatttatcgcgatacaaatgtaaagttgagttggtgtcaagtgttattcaaaccgtgtgaccaacattacataaagtagtaatagtacggttgcttgtcgattgatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0249200, RefSeq:Os07g0249200