Difference between revisions of "Os07g0301200"

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(Created page with "{{JaponicaGene| GeneName = Os07g0301200| Description = Similar to RNA helicase (Fragment)| Version = NM_001065959.1 GI:115471650 GeneID:4342981| Length = 7199 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0301200|
 
GeneName = Os07g0301200|

Revision as of 20:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0301200

Description

Similar to RNA helicase (Fragment)

Version

NM_001065959.1 GI:115471650 GeneID:4342981

Length

7199 bp

Definition

Oryza sativa Japonica Group Os07g0301200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:12248381..12255579

Sequence Coding Region

12248635..12248727,12249039..12249131,12249220..12249384,12250134..12250227,12250314..12250382
,12250912..12251036,12251128..12251213,12251686..12251764,12253677..12253757
,12254053..12254160,12254770..12254894,12255010..12255430

Expression

GEO Profiles:Os07g0301200

Genome Context

<gbrowseImage1> name=NC_008400:12248381..12255579 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:12248381..12255579 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtcgcagtatgcttcccgagcagcaggaggacgtatcgaggaagagcaagaaggagaagaagagcaagaaagacaagaagcggaagctggaggcggaggccgaggtggtggtggtggaggcggctgcggccacgtccacggatgaagcgacgaagagcagcaagaagaagagggccaagggcgatctgggccaaggagaggaggcggagaacggcggtgggaaggtcgtggccgtgaccgggaagggctccgcggacgccaagtacgccccgctgtcatccttcgccgccaccgcgcttcctccccaggtgctcgactgctgcaaggggttcgagcgtccgtcgcccatccaagcgtacgcctggccttacctcctcgacggtcgtgacttcatcggcatcgccgccaccggatctgggaagacgattgcgtttggtgtgccggctctgatgcacgttaggaggaaaatgggggagaaatctgctaagaagggggtgccacgggtcctcgtgctatcgccaacgagagagcttgctcagcagatcgcagatgtactttgtgaagctggtgcaccatgtgggataagttcagtgtgcctttatggtggaacttccaaaggaccacaaatttctgcccttaaatctggagtggatattgtcatagggacacctggtcgtatgaaagaccttattgaaatgggtatttgtcgtcttaatgatgtttcttttgtggttctagatgaagctgatcgaatgctggatatgggttttgaacctgaagtcagagcaattttaagccaaactgcatctgtacgtcagacggttatgttcagtgctacatggcctcctgctgtccaccagctagcccaagagtttatggatccaaatccaataaaggttgttattggatcagaagatcttgctgctaaccatgatgtgatgcaaattgttgaagtattggatgacaggtcaagggattcaagattagttgctttgctcgataaataccataaagcacagagaaacagggtgttggtttttgtgttgtacaagagagaagctacgcgagtagaaacaatgttacaaagaaggggttggagtgctgtttctgttcatggagataaggcacagcatgacaggacgaaagctttatctttatttaaagaagggtcatgtcctttgatgattgccactgatgtcgcatcccgtggacttgatattccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtccacaggattgggaggaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactcaagagaacaagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggtcgttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggaatcgcaaatatatggatctcatttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtgattctgatgaggactag</cdnaseq>

Protein Sequence

<aaseq>MGRSMLPEQQEDVSRKSKKEKKSKKDKKRKLEAEAEVVVVEAAA ATSTDEATKSSKKKRAKGDLGQGEEAENGGGKVVAVTGKGSADAKYAPLSSFAATALP PQVLDCCKGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGE KSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGV DIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTV MFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALL DKYHKAQRNRVLVFVLYKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGS CPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQEN KGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGD SDED</aaseq>

Gene Sequence

<dnaseqindica>6853..6945#6449..6541#6196..6360#5353..5446#5198..5266#4544..4668#4367..4452#3816..3894#1823..1903#1420..1527#686..810#150..570#atttgttttgtgcacgtgatgcgccttggtcgttctaaaccctagaaatcaaccaccccttccccttctccttcaccttcccgccgtcttcgccgccctcgttcctctcttctaccaccaccacctcctccgccgtcaccgccgctgagatgggtcgcagtatgcttcccgagcagcaggaggacgtatcgaggaagagcaagaaggagaagaagagcaagaaagacaagaagcggaagctggaggcggaggccgaggtggtggtggtggaggcggctgcggccacgtccacggatgaagcgacgaagagcagcaagaagaagagggccaagggcgatctgggccaaggagaggaggcggagaacggcggtgggaaggtcgtggccgtgaccgggaagggctccgcggacgccaagtacgccccgctgtcatccttcgccgccaccgcgcttcctccccaggtgctcgactgctgcaaggggttcgagcgtccgtcgcccatccaagcgtacgcctggccttacctcctcgacggtcgtgacttcatcggcatcgccgccaccggatctggtgctgaaaaaattctctaattagttagtttctttttgttaattggttagtactgctgcatcgtgctcgaattgctgctgatggtttgttgttcgtcgtaatttgttgatgccagggaagacgattgcgtttggtgtgccggctctgatgcacgttaggaggaaaatgggggagaaatctgctaagaagggggtgccacgggtcctcgtgctatcgccaacgagagagcttgctcagcaggtaaacccctgaactcaatcttttagggaagtataagggatgtatgcaacttccagtggggataggagaaattgattcacatataaaagggggagatttttggaatagtattttttttcaatttacttgataaattcgtaatacacaatttcatagacactttataatatctgccaatatgttgtatcatctggaaattaaattgagggcggtggttttttttgaaccttagaacctaatgacctaggttatgtgccacaagttgcaataccctggttttgtaactctgaccctaacacgtaggttttctgaaatttactctaatttataagtgtagtctctcagctcacaacctatattttgctgatgataagatcgttgagtatcgaactaattgataaggacctttagtatcgaacaaattgaagtgaaagagttgcatgttcagattttttacctttttctatggttgtatgggattatatagtttgtttggcccagcaggtgtcatatactgatgatatgaacttgtaagataggcatctgatggtctgcaaaaactactgctttttaatacacatgaatgattcattttgtattatatgttagatcgcagatgtactttgtgaagctggtgcaccatgtgggataagttcagtgtgcctttatggtggaacttccaaaggaccacaaatttctgcccttaaatctggagtggtaagatgagacttacacaatattttttttactctatctcagttctggattatgatatatgaccaatgaatgttaatttctagagacattcatcatattgtgatgacatttcaatttgctatattgatttgaaaagttctctttaaatgtattgttgaataattttgtttactttccgaagattcagcagactcgctgccttggattttgttttgtatcaattatccagaagttagttacacggaaatactcatattcctgacccccccccttttttctgcctatatgctttcaggatattgtcatagggacacctggtcgtatgaaagaccttattgaaatgggtatttgtcgtcttaatgatgtttcttttgtggtaagttaactatgcatttcattgtgttgttgtctatggttttgaattagtatacacccatatgggggcaccatggtgcccgggcaccaaggtatgtaatacacaaattcactcaaatttttgaatttttttcaacttctgagtatatacccaggtacaagaattttattcatacctatacctagcaacaaacaactcaaattcaactttattttacaatccattattacatacctaactaattataagtttggatggatgttatatacctagaatcaaaatttaacaaaaaaactattcaaattaagttcaaacttatatggactagttagtaaagaagttaatgtttatacctaaacatttaaataaatggttatatatgctaaattccatggataacaagagaaaagaaacaatattcaaatgaaggataaatactacatgatgtgtggtcaacttcctctatctctgcccagaactacatgtcccatgccagagctacacatgcatcatgtacctccttgatcttttctcctatagtaactcttcatttgtgaaagtaatgtccatttaggaagcacgcatcttggaatgattgaatggttgtgattcatggtgcaggtgaaatacattctcatcaaatctcaagttcaaactcaacttcgtttaggagtaacaaaaaagacaaatttcaggtgaatagtaacatgacactattcacccgaaatttgtcttttttgtttctcttaaatgaagttgagtttggatttgagatttggtgagaatgtatttcatatctacaccaatctctagtaattttttttcatgaatttacaaaacttttaggtatgattttcacgagtttccaacatttagatcattttcatcgatatgtcctctctctctctctctctctctctatatatatatatatatatatatatatatatatatatataattttatttatttgtgaagtttgtcattgatgtttgagtgttactttgagttaacaaacaatatgtttgtgcagttgttgaatctatttgttgtattacattggaggccggagaacttcattgcacctaacaaattgttggccacactttgtttgccatgccacacctatggcaaattgagttgtggcaatgttaggcaacaaccaaacagaccctaagattcttaacatgggacaagcttagagagaaacgcaggtgcatgattgatctttcggtggtgttgtagcaacactcatgtcaagattgctttgttcgctgattttttttttttttggtgttacccccttgataataacgccacaagtttggcattaaaggctcacctggttccatcaaatttgagtagttgggttgactggtcaatgattgtttcataaaattaataatgcacaacatgaaaggaattatatcatttttataacttgaatttgctgttacctaagaataatatggctgaggaactatgctggtttctagtgtacatagttcatattgggttaaatggccacagtgcatatacacataagcagataatgtagtcatttatagaagacaatacaagtgacacaccaatgtatatgtattttcatccacaagatcagggttgtggaacctaccagcactaacagattcggcattttaagatttgagtggtatttcctcttgtctcttccatgccctctctcctctgtcccctactcccctttgttgaactggacttgactcgtgaggatggtcatagtcaatggtaaatattggttcaataagttacacctgtgatgttacctggattttttattttgcgctggtcaattttcattctgtttaattgctttgctcatttgaagtgtaagtgtcctttctaacacagacgtgtctggtaactgataaaggttctagatgaagctgatcgaatgctggatatgggttttgaacctgaagtcagagcaattttaagccaaactgcatctggtttgtctccattactctcttcctttcagggcatgtgtatgtgcatgtccacctttgcatcgcatgtattcttttcctttcatccctttttatctggttggacttatccacaaagtctgttgcatgtgccctcttgctccatagtttttaataccttattcagcacacttgtgctcataagttaatagccactagtgacggcagaaatgagcaagaaatattgttctcaagattttcatacttctatatcacgttgctaaaaaaaccactttagcctcatggcattcataactcttggcatattttacttaccatgatattgaaattgtgatgaatataccgcgtaggtggaatacatttgtacatttttttcatgtcaatttgacactgccatttattttatgtgttactacacctagttatcttttctgaatatatctgcaaccatggccatataattcttcctgtgcagtacgtcagacggttatgttcagtgctacatggcctcctgctgtccaccagctagcccaagagtttatggatccaaatccaataaaggtatagtttctcttttcttatctcttgttaatatctgattgctaatgcggtaatgctgaccttccgtatgtggtatgccaccttgttgtaggttgttattggatcagaagatcttgctgctaaccatgatgtgatgcaaattgttgaagtattggatgacaggtcaagggattcaagattagttgctttgctcgataaataccataaagcacagaggtaggtattgcagtacggattttacttgttgctgtattagtctccatgaaagtctcactttcgaaaatcataggcaaaagcattgcaatcagcatgcatgctggatgctcttgaggataacaaaagattttaagctgagcagcttagaaaattatgtataagattgcatgtcattcgtctcgtcttgcaaaattttctactttggattgtattcagtcacataccaaagctgattgttcaattctatttgtaggctatctcagtttggcaaactaaggaagtattccctccgtttcatattataagacgctttaactttttcctaagtcaaacttattaagttttgaccaagtttatataaaacataacaacattttcaacaccaaacaaacaaatatattcaatgttaggttttaattgaacctctgcacatgttagtattatactaatatctgcttcaacaaactaattaatcaccatttgtcttcatatggatctaagcagattgtgcctgtgttttgtgcaacagaaacagggtgttggtttttgtgttgtacaagagagaagctacgcgagtagaaacaatgttacaaagaaggtagcagatttgtttccagtgtgcgacttaaatatttgtgaaacttatgctctactttcgctaatctacacatgcttgttgtgaaggggttggagtgctgtttctgttcatggagataaggcacagcatgacaggacgaaagctttatctttatttaaagaagggtcatgtcctttgatggtgcgctaattctaactaatttctacatggctgcttataagcattgatagttcagttgtggttttttaatggctactctctcttgcttatttgtgagcttagtgtaaatctagtttttagactttgcccttgtaaatctagttgtggtttcgttatttatcccttaagggattttgttgggcttggtggtattctgctactatttcctgatcgatgatactttgagagttggaagtgttcaactacttgcttgcaacattgttattaatttaaggaaaaagtctttctcatccctgaattctttgctcggtttaattttcatctcttaactcctaaaccaagtaaataccatccctcaactcttgaaaccatgtataccatgacaaatgagtcctgtgccacctaggatcccacgtggatgccaagtacataaactagaagagaaatgagttctagctggttttgggagctgagggtctggttttatcaagtttttgagttgacggttggaaatcaaaccgagccaagagttgaggtatgataaattttggagtatgtgaaatcatttaaccgatagtctcacttaaaatatgctactgaggttttgtaacagaaatgtacagttgtctgcaaccgttgtctgaaaatattgtgtttttatgaatttatttcctttttatcattgcatccgtagcacttttattctcatctgttaacacttgtttttttttcttttgtatattttgcagattgccactgatgtcgcatcccgtggacttgatattccagatgtcgaagttgtcattaactatagctatcctttgactacagaggattatgtccacaggattgggaggaccggtcgtgctggcaagaaaggtgttgcacataccttcttcactcaagagaacaaggtattggagattatgtgccacacgttagcccttaggtttagccttacaacttaagttgtacttattgtcacttcaaaactatatacagggacttgctggtgaacttgtcaatgttttgcgggaggctggtcaggtcgttcctcctgcacttacaaaatttggcacacacgtcaagaaaaaggtttgtgttaactgtgaaatagatcttgttacattctcattcgtagagtgctttgttcatgtctataggtactaccgtgctagttaactaggaatatgtcctcgagaaatcgtttcaatctatgaaaatactgttatatatgctgatgctttatgctacagaaagcttagcgacttacttttttacattaatccttagaaatgctgtaacaccttgccctaacgttgcaagttctaagaaataaacactaaggactttgcatgacatgactgagaaatgaccttaccttattgctaacaattcatttgcaggaatcgcaaatatatggatctcatttcaaagaaatcaaagcagatgctcctaaatcaacaaagattacgtttggtgattctgatgaggactagcaacatttgctggtcttttcttcgttgcgttctgaagttttgatgcttggagtaggccaaatattcgacagcaaaatattgcctttcttgaagggagaacccctctaacagtatcattgtatacctaggttagtttagtatcagtgatttcctaccttgtccagaccatcttattttatacttggttgtatgtactgcaatttgcttctcttgtgttggaaaaaacagtaaaatcagatatgtgctaaggcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0301200, RefSeq:Os07g0301200