Difference between revisions of "Os07g0435400"

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(Created page with "{{JaponicaGene| GeneName = Os07g0435400| Description = Similar to WD40| Version = NM_001066037.1 GI:115471806 GeneID:4343071| Length = 7300 bp| Definition = Oryza sativa ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0435400|
 
GeneName = Os07g0435400|

Revision as of 20:35, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0435400

Description

Similar to WD40

Version

NM_001066037.1 GI:115471806 GeneID:4343071

Length

7300 bp

Definition

Oryza sativa Japonica Group Os07g0435400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15194771..15202070

Sequence Coding Region

15195158..15195243,15195670..15195848,15196783..15196867,15197038..15197265,15197810..15197870
,15197959..15198029,15198117..15198223,15198308..15198440,15198607..15198757
,15198884..15198986,15199067..15199175,15199324..15199483,15200030..15200131
,15200629..15200746,15201333..15201487,15201587..15201685,15201815..15201904

Expression

GEO Profiles:Os07g0435400

Genome Context

<gbrowseImage1> name=NC_008400:15194771..15202070 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:15194771..15202070 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcacagcgacggcgaccacggtagcgacctctccgccgacgattccccgtggagcgaggggagctggtccgacgacgatgacgagggatcgctatccttcgaggacagcggcgaaggctccgacgccgagtccgacgaaccggatgccccggcggtggaggagagcgactcttctgaggacgaggtggcgccacggaatacgataggagatgtgccgttggaatggtacaagaacgaggagcacatcggctatgacatcactggtagtaagatcaagaagcgggatagggagggccgaattgaggcctacctcaggaatgctgatgatgctaagaattggagaaagatctatgacgagtataatgatgaagaggtgcagattaccaaggaagaggctaagataattagtagattgctgaagggaaagactccacacacaaatgtggatccatatccagattatgttgattggtttgaatatgatggtaaaggccatccactttctagtgctccggagccaaagaggcgatttgtaccctcgaggtgggaacagaagaaggttgttaaacttgttagagccattcgtaaaggatggataaagtttgataagccaaaggaggaacctaacttttatctcttgtggggagatgaaactgatacagcagacaataagcggcaaggcctgagctacattcctgcacccaaaccaaatttgccaggtcatgaagagtcatataatccttctgttgaatacattccaacacaagaggagatagattcatatcagcttatgtatgaggaggacaggccaaagtttattccacgaaaatttgattgtcttagaagtgtacctgcatatgagaaggcacttagggaaggctttgatcggtgtctagatctttatctctgccctagaacacgcaagaagcgtataaacattgatcctgagtcactcaagccaaagttacccagtaaaaaggatttgaggccatacccaagaacatgttaccttgagttcaaggggcataatggtccagtgaagtctctttcagttgaagcaactgggcaatggatagcatctggttcatctgatggaacaattcgtgtttgggaggttgaaactggtcgctgcattaaggtttggaatgttggtggtgttgttcaccgtattgcctggaatccttcacctgatagacacattcttgctgctgttgtagaccatgatctgctgcttcttaatgctgaggttggggatgaagacgctcaaatgaagacaaaagggctcctccaaatcgaggaactggctcaggaagaggataatggtgataagaaaccagctgtcaagtgggtcaagcatgaaaaatttgatggaatcatgttgattcatcataaggctgtgtcaactgtagagtggcatttcaagggagactatttcaccacagttgtgccaagtggtgattcaagagctgtactgttgcatcagctctctaagaagcattcgcatcatcctttccgtaaattgccaggccttcctattgcagcagtgtttcatccaagtcaaaagatgttctttgtggccactaagaaatttgttcaggtttatgatctccagaaggcacagttagtcaagaagttggagtcaggtgttcgtgagatttcctccatctcgatacatcctggtggtgataatgttatcgtgggcagcaaagatggtaaattgtgttggttcgatactgatctatccacgcgaccatacaagacattaaagaaccactcgaaggatatcactaatgttacttttcaccggaaatatcctctttttgcctcatcctcagaggattgtacggcctatgtattccatggaatggtctattcagatcttaaccaaaacccacttattgtaccattggaaattcttcgtggtcattcaagttcagatggaagaggagttctggattgcaaattccacccaagacagccttggttgttcactgctggtgctgactctgtcgttaggctttattgcgactaa</cdnaseq>

Protein Sequence

<aaseq>MGHSDGDHGSDLSADDSPWSEGSWSDDDDEGSLSFEDSGEGSDA ESDEPDAPAVEESDSSEDEVAPRNTIGDVPLEWYKNEEHIGYDITGSKIKKRDREGRI EAYLRNADDAKNWRKIYDEYNDEEVQITKEEAKIISRLLKGKTPHTNVDPYPDYVDWF EYDGKGHPLSSAPEPKRRFVPSRWEQKKVVKLVRAIRKGWIKFDKPKEEPNFYLLWGD ETDTADNKRQGLSYIPAPKPNLPGHEESYNPSVEYIPTQEEIDSYQLMYEEDRPKFIP RKFDCLRSVPAYEKALREGFDRCLDLYLCPRTRKKRINIDPESLKPKLPSKKDLRPYP RTCYLEFKGHNGPVKSLSVEATGQWIASGSSDGTIRVWEVETGRCIKVWNVGGVVHRI AWNPSPDRHILAAVVDHDLLLLNAEVGDEDAQMKTKGLLQIEELAQEEDNGDKKPAVK WVKHEKFDGIMLIHHKAVSTVEWHFKGDYFTTVVPSGDSRAVLLHQLSKKHSHHPFRK LPGLPIAAVFHPSQKMFFVATKKFVQVYDLQKAQLVKKLESGVREISSISIHPGGDNV IVGSKDGKLCWFDTDLSTRPYKTLKNHSKDITNVTFHRKYPLFASSSEDCTAYVFHGM VYSDLNQNPLIVPLEILRGHSSSDGRGVLDCKFHPRQPWLFTAGADSVVRLYCD</aaseq>

Gene Sequence

<dnaseqindica>6828..6913#6223..6401#5204..5288#4806..5033#4201..4261#4042..4112#3848..3954#3631..3763#3314..3464#3085..3187#2896..3004#2588..2747#1940..2041#1325..1442#584..738#386..484#167..256#agccggcggcgcgcactctctctctcccccctactccgccgcgctggtggcgccgcctcgaccccaactgcggcggctgtctccaccccctccggttggcagcgcccgcggccaccgccactaactacgcgcctgccgccgccgccgccaaggcctttgacagaatatggggcacagcgacggcgaccacggtagcgacctctccgccgacgattccccgtggagcgaggggagctggtccgacgacgatgacgaggtgcggctctcctcttcgaaggatttcgacctttttcacccaattgtttgtggcgtgcttttttttttgtttgtttgtttggtttgtgagtaagcgttgatggttcatctccggttgttcgagctgcagggatcgctatccttcgaggacagcggcgaaggctccgacgccgagtccgacgaaccggatgccccggcggtggaggagagcgactcttctgaggacgaggtgagacccatctgctgtttgatgtaaaacatcgcccgtttaattatttcaggttttaattcattaacgattccgcaatttcgtgttctcttgttgcaggtggcgccacggaatacgataggagatgtgccgttggaatggtacaagaacgaggagcacatcggctatgacatcactggtagtaagatcaagaagcgggatagggagggccgaattgaggcctacctcaggaatgctgatgatgctaagaattggtgagttgctgctagaactttggttggtgtagtttcagtagctgatgcagccaaaaaaactttggtccgatgaacataggattggattagtcatccataacactacaatttctattttgctacataagcatcacaacaaaaaggatgaatgagtaaatgatgaggctggtaggatgcttcattgcttccctatttactgctttttcatttccagtaggatgccctcattaagtcttttgattgtccgagtcttgtcatactcaaaacatgctagcttaagctcaatcatgatttcaggtaagaaggtgcagccacatgcgtattaacattcattttgaatatttcgttgcataacattttgtaaagatgtcgtcgggtccagatggtaatcttgttttggccaataaagtgaaaggttcttgataaccattacaattaaaatgtccatattttccttgtcgctccattgattggaaaatgcattttgcatgcactattgctttgcacatcatctaatgctagcttaattggctattaatctacttatgaatttaatttatcctcattgcttttttccgatttgtaggagaaagatctatgacgagtataatgatgaagaggtgcagattaccaaggaagaggctaagataattagtagattgctgaagggaaagactccacacacaaatgtggatccatatccagtacgtgcaataacacatatattatgcatttgtatttaatgctaaagttcatagctatagtaaatgcttatcggtagggggcaatgttgtcttaatgggtatgcaattatgcatgctgctatgcttatgtattttatgataaacattactaaaaaagaattcccaacatgtggcatacatatctgtaccaatttaaactgatatttttgccattacaaaaatattaatctacatttactatgcaaaattcaatgggggttacctgcatacatctagatagatagtgtttcctcaaggtttttatggttctagtgatgtattgagaggtagaggtatctcctagtgtctacaagtctcagtagagctatactttatgattaacactacgagatacatgtaccttccaatacctcttaaggaatgtaaaaaagtcctccaactatttatgattataatgtgtgttgctcgaaaatgggctgactaatgccttattttaggattatgttgattggtttgaatatgatggtaaaggccatccactttctagtgctccggagccaaagaggcgatttgtaccctcgaggtgggaacagaagaaggtatgttccttgtaatgcccctatttgtttagttatgtttttcaagatataaacaactgtgtagatgtttattaccgagttcaacttgattaaaagacaagatagatgaatgcatattctatatggaataatttattttctttttgctagagtgaaatgaatgctggcaggttacaaatatcttttttagtgaatcaaattcatgaatacaggacaatgaggtgtttcttgttttcttttattatgtttgctctattgcactatcttctgtttcagcatttggtattctaaatgagtgcacattgcagttagtctttaatgatgctacatgcactcttattccattgtgaagatattgttttcggttaaaattgaataagccataccaaatgcctcaattgtccataagaattttttgttaacttccgtctgaaatacattcgaatttttagtgcatgctgtcatgtttctggcacgctattgaactattaaacagttggcattgccattgagatagccttgtagctcatgtggtcttttgtgcaggttgttaaacttgttagagccattcgtaaaggatggataaagtttgataagccaaaggaggaacctaacttttatctcttgtggggagatgaaactgatacagcagacaataagcggcaaggcctgagctacattcctgcacccaaaccaaatttgccaggtaccatgctacaattgcgtaatcagccacaaaatgtttggacatgaacatttccgtgccagcaaagttatttagtgcagttgtgctgagcactcattatatttcaacttatatccattcttataatggcgttaatttgcatattcaggtcatgaagagtcatataatccttctgttgaatacattccaacacaagaggagatagattcatatcagcttatgtatgaggaggacaggccaaagtttattccacgaaagtatgatatctacattgttattttagttctcttatgtatgtcttaaatatatttaatattttatctgttggttttgtcagatttgattgtcttagaagtgtacctgcatatgagaaggcacttagggaaggctttgatcggtgtctagatctttatctctgccctagaacacgcaagaagcgtgtaagtagaaacctcttttcatgaggacatgtggttcattttttacttttcctccatttatcaatttggaccattcttttttttttgtcattttctagtacgtgttgattaatttataatctgcagataaacattgatcctgagtcactcaagccaaagttacccagtaaaaaggatttgaggccatacccaagaacatgttaccttgagttcaaggggcataatggtccagtgaagtctctttcagttgaagcaactgggcaatggatagcatctggtactatattcattttctatgagccacatgcatatatacgtgcagaatattctaatgattcaggtgttaaaagatctggcattaaccaatgcacaagatttgaaggattaggtcctttgacatccatgattgcacgagtttattgtaacagttacttctaatgtaggttcatctgatggaacaattcgtgtttgggaggttgaaactggtcgctgcattaaggtttggaatgttggtggtgttgttcaccgtattgcctggaatccttcacctgatagacacattcttgctgctgttgtgtaagctcatgctgtcccctttgatgcttttcctttctttgacctttatgtattctaaattccaatcttccatctttgaaacagagaccatgatctgctgcttcttaatgctgaggttggggatgaagacgctcaaatgaagacaaaagggctcctccaaatcgaggaactggctcaggaagaggataatggtaagataaactcaaccaagcaattctgctaatgtttacagactcattcactgtttctgaattcttcatactatttctatattgtaggtgataagaaaccagctgtcaagtgggtcaagcatgaaaaatttgatggaatcatgttgattcatcataaggtaaccgggtagtattacttaaaatatgacttccttttaagttagcagcttgtctttctccttgcttaccatctactttattgatcaggctgtgtcaactgtagagtggcatttcaagggagactatttcaccacagttgtgccaagtgatatcctttataaagcatgcaatcttgttttgttttattgcaagtgcaccttggcagaataacaaatattaaaaacatactttttctaattcagtcttcccactaccaatcagagaactgatgacactagttatggaagtacctttttgtgaccttttaaagtcaacaagaagaacctttaaccactaatttaattgctatataccggaaagttacgaagtgtaatatactaatatgattttttgtcttatcaagaacttactctttacatttttgtataaccatgctagacattcaaaacaataacttcggtgaaaacaaatatggtttgattgcatgcattcttgatagtgattatttgctggctggatggagtactatcagttacagtctacagcaaaggtcccatgtaaattagctatgttctttgttcaggtaggggcatgtgctttctattcttttgcatgtccccatataatgcataattatagacatgcatcttcattatgattttattcaagtgtattccttaattcctgcttacgtgattcaagagctgtactgttgcatcagctctctaagaagcattcgcatcatcctttccgtaaattgccaggccttcctattgcagcagtgtttcatccaagtcaaaagatgttctttgtggccactaagaaatttgttcaggtttatgatctccagaaggcacagttagtcaagaagttggagtcaggtgttcgtgagatttcctccatctcgatacatcctggtggtaagttatatgttagctgtatgttaattaactaactgctagatatttggggcaagagttgcttcacattgcattgtcctaagcaataaatcacttgtttatatcagtattattgcattactattgagttgattggtgcagtgatgatcttttataattctttcatttaggtgataatgttatcgtgggcagcaaagatggtaaattgtgttggttcgatactgatctatccacgcgaccatacaagacattaaagtatgattcttatcttatctttaaacatcttttcttttaggaaatctatagattttttttaaaaaaatgttttctgtgatgtcttacaaaggtaagcatcatgccaagcgaatttgctctttgctcagaaggaatgctgtcaattctgtttgaggttcatgcaaaagctgatttatttcctactaaaaagaagctgaaattcaatgttgtttccattacttttatcattacttattgtcctatcattgtttgctgagtttttttttctgctaacttaacattgatgttgtgtatttcaaagtgttgttatgtatcaaatacttgaatatggacagcatgggtcacatgtttttgctgtgtggtgccattctttccaggaaaatattccgggatgaaaacaagttctctgcagtcttaaaaaatttcacactaattataaatttatcataattttgagtatttattaaatttgaaatgtaaaaggttaaaagcaatgaaacattgatgccttctcttaattctaaacctagcgtaaataagcatagcctatgccctatgcatttccaaacatggtgcataaggttctgctccaatgaattatgctttgatttggattaaaagggatagctctgactagattttaataattctaaggattctctgagaggagagctactagttagtgctcaggaatgtcttcccttgttccatcttactcatttacaccttacataatccatattttttcagaaagattttccagttagtcaaaggattggctattattgtttgtcatccaactatgactcttctctttttcatggttcagatcacctttttttttttactgggagatcgcattattatgccctatgatcttttgaactccgatatttctattttgtgctgttgtaactcgtttgcttaatttcaggaaccactcgaaggatatcactaatgttacttttcaccggaaatatcctctttttgcctcatcctcagaggattgtacggcctatgtattccatggaatggtctattcagatcttaaccaaaacccacttattgtaccattggaaattcttcgtggtcattcaagttcagatggaagaggtacatatatatctagtgtcttttttaatttgcatcctctaacatgtcctttttcctgtacacatttctttacatacatgtattattagctttttgttgataaaatgtactaaccacatatattcctaaataattaagtcaatactgagttgagttgatcgagtaatcttagaactgtgtggatgcattgctgcaaattgaagataaatattttatttgttctctcctttttgccttttgggaagaagtttcttcttgttgtttcttctaattattagtgatatctttactgcattagtttaaaattctttgaaggatgccaataatgtttaactcatttgcttgctttattgttgcacttcaaaattcttcaagtaattttgggcacaatatctaatcatcagttgtgcctttgttggtgtgcaggagttctggattgcaaattccacccaagacagccttggttgttcactgctggtgctgactctgtcgttaggctttattgcgactaaaggtgctttcgaaaaaaaaaacaatagatggttttacaaggcaatgcaatatgtctggtctttctacgggctcgtatacgatgatggatggtgtatcatgccaaacacttaactggagccagggcacgtgttgagccatctgtgctgcctaaattttggttcaaattatttgtaccctattgttattttagttctgtagtaacagtgagacatgcagagtgttccagaatcgtggcaaaggtaggtgtgtactaggataaacagataaggaacaccgagctaatctatgctattccaaaagaggttttgtgctgtcacaagcttttgtggtctctgaagctgaactgaactaaaaaagtagtgatattggaagcttgagttcgaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0435400, RefSeq:Os07g0435400