Difference between revisions of "Os07g0485400"
(Created page with "{{JaponicaGene|
GeneName = Os07g0485400|
Description = Asparaginyl-tRNA synthetase, class IIb family protein|
Version = NM_001066192.2 GI:297607219 GeneID:4343250|
Length ...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os07g0485400| | GeneName = Os07g0485400| | ||
Revision as of 20:36, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0485400 |
|---|---|
| Description |
Asparaginyl-tRNA synthetase, class IIb family protein |
| Version |
NM_001066192.2 GI:297607219 GeneID:4343250 |
| Length |
6097 bp |
| Definition |
Oryza sativa Japonica Group Os07g0485400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:18498783..18504879 |
| Sequence Coding Region |
18498783..18499145,18500148..18500216,18500501..18500605,18501034..18501083,18501100..18501226 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:18498783..18504879 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:18498783..18504879 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggccgccgcggcgacccgcctcctccgccttgccccgcgccgcctccagggcccacccagggcgtgcccgttcgccgccctcccgctccacccgacgccggcccggctcgccgccaccacctcgaggtggcgccgcttctgcgccgccgcgcaggcctcggcgccgcccccgccaccggccgccacggcggcggcggcggcggcctcgggggaggccgtgggggagttcaggagacggacgcgggtggcggatgtcaagggaggggaggacgagggcgccgcgtgggttggaaagcagctcgccgtgcgcgggtgggtgcgcacctgccgcgcccagaggaccgtcaccttcgtcgaggttaatgatggttcttgcttgtccaacatgcaatgtgtattgactcctgatacagaaggctacgaccagatagactctatcactactggggcctctgtgttagtggaaggagttatagcaagcagccaaggtggtaaacaaaaagtggagttgaaggtttcaaagatcagtgtggctgtagacaatattatcccaggtaagcacgcttctagtgcatttttttggtttcacttctttgtacagattggagaaagtgatccaacatcttttcctatacaaaagaagcgggcatcaagagaatttctgagaactgtagcccatctccgtcctcggacaaatacttttggcgcagtggcaagagtgagaaatgctttggcatacgcaacccacaaattttttcaagacaacggatttgtttgggtagcaagccctattatcacagcatcagactgtgaaggagcaggggagcagttttatgtgacaacattgatttcgaatagtgctgaaggtggttctctagtcaaggatattccttctactaaggatggaagggttgattggtcacaggatttcttctgcaaaccagcatttctgacagtgtctgggcaactgaatggtgaaacatacgctacagctctatcagatgtttacacttttggtccaacatttagagctgaaaattcaaacacctcaagacatttggctgaattttgggtgaagtatgttctagagaactgcaaagaagatatggatttctttaatacatggattgaaaaagggatcatcgatagattaaatgacgtagttgagaaaaactttgttcacttgtcatattctgatgctattgagctacttgttgggtccaagaagaaatttgagttcccggtcaaatggggattggatctgcaaagtgagcatgaaagatatatcacagaagttgcttttggtgggcgcccggtgataattagagattatccaaaggaaatcaaagctttctatatgcgagagaatgatgatggtaaaacagttgctgcaatggatctattggttcctcgggttggtgaactcattggtggaagccaaagggaagaacgtcttgattaccttgaagctcgcttggatgagttaaatcttaacaaagatagctactggtggtacttagatctacgtcgatatggatcagttcctcatgctggttttggtcttggatttgaaagactagtacagtttgcaactggaatggacaacattagagacaccattccatttccccgggttccaggctctgcagagttttag</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAATRLLRLAPRRLQGPPRACPFAALPLHPTPARLAATTSR WRRFCAAAQASAPPPPPAATAAAAAASGEAVGEFRRRTRVADVKGGEDEGAAWVGKQL AVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPDTEGYDQIDSITTGASVLVEGVI ASSQGGKQKVELKVSKISVAVDNIIPGKHASSAFFWFHFFVQIGESDPTSFPIQKKRA SREFLRTVAHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVASPIITASDCEGAG EQFYVTTLISNSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLTVSGQLNGETYATAL SDVYTFGPTFRAENSNTSRHLAEFWVKYVLENCKEDMDFFNTWIEKGIIDRLNDVVEK NFVHLSYSDAIELLVGSKKKFEFPVKWGLDLQSEHERYITEVAFGGRPVIIRDYPKEI KAFYMRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNKDSYWWYL DLRRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVPGSAEF</aaseq> |
| Gene Sequence |
<dnaseqindica>1..363#1366..1434#1719..1823#2252..2301#2318..2444#3039..3176#3818..3895#4096..4173#4273..4341#4675..4758#4850..4936#5319..5414#5496..5570#5717..5843#5982..6097#atggcggccgccgcggcgacccgcctcctccgccttgccccgcgccgcctccagggcccacccagggcgtgcccgttcgccgccctcccgctccacccgacgccggcccggctcgccgccaccacctcgaggtggcgccgcttctgcgccgccgcgcaggcctcggcgccgcccccgccaccggccgccacggcggcggcggcggcggcctcgggggaggccgtgggggagttcaggagacggacgcgggtggcggatgtcaagggaggggaggacgagggcgccgcgtgggttggaaagcagctcgccgtgcgcgggtgggtgcgcacctgccgcgcccagaggaccgtcaccttcgtcgaggtgaggggaagctttgcgtttgcgctctcgcatccctttctgtttgaagcgtgaattcgtgatggtggcgctaatggttagcggtcttgtgtttgatgaaatgaacggtgcgaatgattagtttgcgcacattgcataaaattgcattgtggactaggaattgggagtgctggaaaagatgctttccttcagtgcactattcacattgcttccccaatgtcgttgatcattttacatttcatgaaacatttcgatccatggttatgcgattgtactaaactagctttcattgtactacttttgtacaaattacgataacaagactgaacttctggatagatattacagaaatcatttttgtgactgtttgataagtcgtccttcttttgatgagaattgcagcctgtttgacttgcataccagcagttctgtggagtgtgccattagttgtttggttgatgcctaaccttgccataactaagtttaggctagttgtggcatggtggcacaaatgtggcttagaaatagttggccacaaatgtggcatgcttagctctaaatttgagagcatgacatgtgggtcccaaagtttaaaaagtgtggcataacacaattgcggtagcgaaccaaacacatgcctagaaaattgtggcgtggcaaagtgtggcaaccaaccaaacagcatgttacttgcctacttttctctaaggcctacttttgtgttattaactgctttgaagttagaaatcaggacaatttctctaaggcctacttttgtgttagtaatcagacttcagacagtctttcatggaccagcaatactaatctagtaatctgcatgccatgagtgcacagtataatgaatcagagtatctcatattctgaatgcataggatgttaatactgtcatctggagactttaaagttccctgaaataatggtaatgactattggcttttactttaaatctctaacgcgtcctaaaatttaaatttatttcaggttaatgatggttcttgcttgtccaacatgcaatgtgtattgactcctgatacagaaggctacgaccaggtaagcaatcattcagggaatcagggtacaactagatagtagaaacaatacatgttaattttgttttgttattctggtcaataaaaatagtttgatcaatccaatggttatcttgtgaacacagaaaataaaactctgataattgtgacatggcaccaacaatgacaccagcgttgtctagttatgtctcaattccttttattttccttgctatagttgcagccaatgtgttcttgtggctatagtacattttactggtcaatattttcattggtggatgtcagatagactctatcactactggggcctctgtgttagtggaaggagttatagcaagcagccaaggtggtaaacaaaaagtggagttgaaggtttcaaagatcagtgtggtaatggtttcattctgcctatagtttcctccttttcctttttatttccttttttctttgcgtgcctcacaaatctaaatgaaatgtggacagattctggagttaactagctatttccagatatcaaaataaaatttctataatttattgatataggaaaatacttgtggagtagttaaggtatctctttttgtatgctactatgctagtcttgtactcttgttaaagacagatatgagcgttaaccgaacactcctatatcgaataagttatttgatgatccctaacgtggtaacacacaatgcacaaaaaaattcgcccctatgctttctttttatataaagaaatttctgatggcatgacaaaaggatagacctatagactgttaatgttgattgagaatctgcagttgcattttgctttatcaggctgtagacaatattatcccaggtaagcacgcttctagtgcatttttttggtgtgttctgatgtaggtttcacttctttgtacagattggagaaagtgatccaacatcttttcctatacaaaagaagcgggcatcaagagaatttctgagaactgtagcccatctccgtcctcggacaaatacttttggcgcagtatgattttactcattgctagttcttttctgatactttttttttgctcagaagctactaaatctgtagacttgtgttatgccttggaaatgatcatgccctttctgtccacaacttttctacaaaatgctcatcattatccttttctagatgcgttgttaattccctaatttagctcataaattagcatacaagttgtgacaaggtttgctatgcaaatattacaaaataagtggcatgtttatagatgacattctgtccaatccaaccttggatatggatctgccaatgtggtgatgaaatacatacattatgtagaattgcaatggactatgatcaatgcagccatggacaggaaatgtgtgtgattctcatattggcaagaatccaacaaactgctgatatagcatcatattctgcacatcaaaatagtgcaaacgttggtagttttatgtgttgtagtaagatgaacttttgcgttagaaagtgcctttttcttatgatgaagaagctggctggtgtccaacatttttcatctctctagttatgtaacttattctatggaatttttactgtactgttgtacttatttaggtggcaagagtgagaaatgctttggcatacgcaacccacaaattttttcaagacaacggatttgtttgggtagcaagccctattatcacagcatcagactgtgaaggagcaggggagcagttttatgtgacaacattggttagtatttcgtcaataagattctatagagtagtgtatagacagattgcttggtatgtaacaaatttactgtttctgggggaatgttctgctcataatgtcatttcctgtactaacatgctgttcatattgcaacacacattttggtcttctctatttttacctcaaaaccattagtgtactttttgctccagttcagaaattaagtgctctttttctttttttcctcacaaaaaaaaaagaaattaagtgctccgcatcatcctgtactaatatgcttgtccaaatcagaaactacttgaagttttcttttagttttgtacttctgtgtctgtttagaacagcttcactatgttattaggtgcactgctaaatcagtttgaattttccatctacagatttacttatttaaaaatcattaaagttctgctataacagttgattaagtttgtcatgattggtttttatgtatctgtctatatttaaagatatttatggctctgagtatcacttattatctttttatgtttacaatatattccatggaatgatcagagctctccattttggtttctaattgccataacccctttcattatgtttctatttaatgctgttagatttttttccctgtcatacagatttcgaatagtgctgaaggtggttctctagtcaaggatattccttctactaaggatggaagggttgattggtcacaggtaaaacttcagaatgaatgcttatgcaaccttttgttgttaaaagtcaaatgtttcttccccattttaagcaaatttacccgtataatttttgtgatatgctctgttatactgcatgccaacagctgttcaagtaatccaaatgtttcaatgtctttgtggttttcgtaacaatggttatttgcttgtatctatgctaggatttcttctgcaaaccagcatttctgacagtgtctgggcaactgaatggtgaaacatacgctacagctctatcagatgtaaattttcatttgccagattcatttgaaataattttctgtcgtatttgatatagctgtaaccagtgtttctgtttcctgacattgcttattctacaggtttacacttttggtccaacatttagagctgaaaattcaaacacctcaagacatttggctgaattttgggtatcgcaatattcttttacatttatgtttctttcagaattttaaattccagaactcttaatttacaggttttttttttgttggtttgtgttccggggaagatgattgagcctgaacttgcctttgcggatctaaatgatgacatggcatgtgcgagttcatatctccagtatgtagtaggtgcccttttttgcttggtgctcaactctgttagtgattatttcattcagacaatattttatggatgcttcacagttactgacttgctgaattgtggggaagatgtctctatatgcttacaccatttacctagttactgcttgtttgatacaggtgaagtatgttctagagaactgcaaagaagatatggatttctttaatacatggattgaaaaagggatcatcgatagattaaatgtattcctctcagatctttcttctgttgctgcactatggattgttttggtcaagtttcatgctgaaatattgaaaatgtttcttcttgcaggacgtagttgagaaaaactttgttcacttgtcatattctgatgctattgagctacttgttgggtccaagaagaaatttgagttcccggtaacacacaaattcaattatttatattctcatattctcatttggactacattacaattttgttccttgtgttctatttaaagtcctaaccaggaaacgaaaattgactgcatatctgtctttggtgttggatggcatgtcaacatgcttgttgatagaacaaatgcttatactttttgtagttactgataatttgatttgtttaattttaattagtgtgcacaaaattacctgtttgttttctacttctacatactcagttctgtgtactgtggatccttcaacaactgtccctgagtaggcaaatgggtaaatgcaagaatgcgagtgattattttacaaaaataatgcctctttcttttgtcttttgaaccatccataggtcaaatggggattggatctgcaaagtgagcatgaaagatatatcacagaagttgcttttggtgggcgcccggtgataattagagattatccaaaggtttatatcgtcactggtctgtgattaactagttcattaacaaagttgtcatacttcaaaatttccttttattttgcttaggaaatcaaagctttctatatgcgagagaatgatgatggtaaaacagttgctgcaatggatctattggttcctcgggtaagcatatacaccaatagctgacatctcaaacaatacatcatatgtaaaattccgagtatataaatagacaaaatggaggcaaagcttctagcatatttgaattagttgatttgtaatataactcttttcctgttcaatttcaggttggtgaactcattggtggaagccaaagggaagaacgtcttgattaccttgaagctcgcttggatgagttaaatcttaacaaagatagctactggtggtacttagatctacgtcgatatggatcaggttaaatttcaaatatcaaaatgagctggataatgcaatttctccttttacattacagatcatttaaaatttgttattcggtagcatgatttcccccctgtcatgatccataacgaatttccaccttttctgtaacagttcctcatgctggttttggtcttggatttgaaagactagtacagtttgcaactggaatggacaacattagagacaccattccatttccccgggttccaggctctgcagagttttag</dnaseqindica> 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