Difference between revisions of "Os07g0565300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0565300| Description = Bromodomain containing protein| Version = NM_001066545.1 GI:115472822 GeneID:4343623| Length = 4042 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0565300|
 
GeneName = Os07g0565300|

Revision as of 20:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0565300

Description

Bromodomain containing protein

Version

NM_001066545.1 GI:115472822 GeneID:4343623

Length

4042 bp

Definition

Oryza sativa Japonica Group Os07g0565300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23326266..23330307

Sequence Coding Region

23326510..23327058,23327353..23327926,23328126..23328203,23329192..23329241,23329952..23330185

Expression

GEO Profiles:Os07g0565300

Genome Context

<gbrowseImage1> name=NC_008400:23326266..23330307 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23326266..23330307 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtggtggtggtgggaggcggaggaggaggaggaggaggaggaggggtgaagaaggaggagggggaggaggaggcgaggggaagaggaggaggaggcggcgtggtgggagggtgggggacgtgggaggagctggtgctgggcagcgccgtcatccgccatgggggcgttgcgtggggcgccgtcgccgccgaggtccggtcccgctcgccgtgcgccttctcgcctgaggaatgtgaagctaaattttcagagatacaagcacgctactctgcatgcgatgcttggtttgaggagctccgtaagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattggatccctgcagtccatgatcaaaagcctcagcaatagcaagcatgatgatggcaactctgaatgtcacactagtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaagcattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcagaaatctgaaaaggtgcaacactgcgatactgattcaattcaagtgaacaatacttcagcagaggctttggtaaaaccccttgttgaaaaaaaggtttgtgctgaagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttctgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacagatggttcctctgaaggctatgcaaagaagggcttgaaaactccaaatctagaatctggtgtgtctgtcgttgagaaagcaaaaccaaacttggcagagattttgaaaactatatctactcaaagtgactgttatatgttgcaacgccgacttgatgtccagcggaagcggactagatacaagaagatgattcgccggcatatagacttccgtatccttcattcaaagatcaagagtggcgcaacatcttctaccaaggagcttctaagagacattctactgtttgtgaataatgtccttgccttctatccaaaggctacgttagagcacatggctgcaattgaacttcgaaatattgcattcagaacagtgcaagagagcgcaagcatgccctctaagagttgtggagtaacaggagcagcaactgcccctttagtgaagaagaacacccgacccgtgcagcctggaagtcatgggcctcatgatgcaaagagaagcaaagtttctttaaaggggactggaagtactgtcaagcagggtgaggccaagggatcgcgtggtggttcatcagtgacagctaatgtaaaaactatgcagagaaatccaccggccaagaagagaggcgttgggcggcctccaaagaatgggcagaagcgtgctgctgcacagcaagatagccctaacaaaggcaggaagaggacccgacgctga</cdnaseq>

Protein Sequence

<aaseq>MVVVVVGGGGGGGGGGGVKKEEGEEEARGRGGGGGVVGGWGTWE ELVLGSAVIRHGGVAWGAVAAEVRSRSPCAFSPEECEAKFSEIQARYSACDAWFEELR KRRVAELRNDLKKSENFIGSLQSMIKSLSNSKHDDGNSECHTSHTESCSNNENTADNN SSSKALSKDRSSAASFTEEASNSQKSEKVQHCDTDSIQVNNTSAEALVKPLVEKKVCA EDGLLWGSRKKRAVRDRRTFLMADNSCRAGENTSTSHIQTDGSSEGYAKKGLKTPNLE SGVSVVEKAKPNLAEILKTISTQSDCYMLQRRLDVQRKRTRYKKMIRRHIDFRILHSK IKSGATSSTKELLRDILLFVNNVLAFYPKATLEHMAAIELRNIAFRTVQESASMPSKS CGVTGAATAPLVKKNTRPVQPGSHGPHDAKRSKVSLKGTGSTVKQGEAKGSRGGSSVT ANVKTMQRNPPAKKRGVGRPPKNGQKRAAAQQDSPNKGRKRTRR</aaseq>

Gene Sequence

<dnaseqindica>3250..3798#2382..2955#2105..2182#1067..1116#123..356#gcgacgacgacctcctcccacacgcctatcgtcatcctcgcgatcgccgcattcatccatccactccccccgcacgccgaaggaataacctagaccagagacgaccaaggagagcgtctccgatggtggtggtggtggtgggaggcggaggaggaggaggaggaggaggaggggtgaagaaggaggagggggaggaggaggcgaggggaagaggaggaggaggcggcgtggtgggagggtgggggacgtgggaggagctggtgctgggcagcgccgtcatccgccatgggggcgttgcgtggggcgccgtcgccgccgaggtccggtcccgctcgccgtgcgccttctcgcctgaggtccgtgcttcccccctccccgtctccaaccctaacctggtggtagtgctcatgagtcgtgcccaatggctgtattgtcggtagttgtaggatactatgcattagggcatggatttagccatttaggggtgcttaatttaagtattatcatcgttggatgatttggtacatttccatcaaatggtcttaggttgtgattttagcgatgctgagaatatgtggtcgtgttgcttggacgggaatgagctttacattccaaacaaaatgaagcaaatgttaaggaacacatgctgtaattttgactcgcaacgagggaatggaatgaaaatgtaaccttacagccattggccttacagtaaagcacccattgcataccttgttcttgcttcgataccaaagtttgacagtttgtgcaatgccaagggtgattcgtcttacacttgcgtcaaactaatttgatggaatgctgttgttagctcatgcctttcttacaatagtttgggtatgtgagagcattgagcccattgtctgaaacattttggagcttagtacaatcagttttacagatcaaattgtttctagtttccaaaaaggagcaatgcattttatccgcctgcatgtctgatgcctgctggaagttatggtagacatttgcttacttgatattagagttccatactaattatgagcttacccattcttgttcgcaggaatgtgaagctaaattttcagagatacaagcacgctactctgcatgcgagtaagtgttgcatcattctttctatgttgtactagcttgtccacatgaattcagtcttataacgtcttgcagtaagtatgtgacgataaattagtaaattgctaaccttgaactttaacctgtgttgagtctcctgtcttggcctattgtatttttcatgcgggaactggatgaactctgaaactgattacacaagatgcataatttgtgtctcatggcacataaaagctaaatagacacgatttataccttatattatttgccttctttaagttggcctatgatttctaggatctacaattagaattacagcaggtgatttttttcctactctctgatatagttttccaattaggacaagtttggtggtaaaatggtgttttgctgtctagcagtgaactggcttagattttagaaattgttgtatgagggcaagggcactggtggatctggggtagagccgtagaggtagggataatactttatgatcaattgatcattgttgagttagctttgggatcatcagcatgagattcaaagaaagaaacagcaagtctctcaagttgggcacagttcgaacagtgcgtattttacaaaaagaaaaaatcttgctatagagaagtattttttaaaaaacaaaataaatccatttttcaagattttaataattaatagtcaatcaatcatgtgctaatgactcgccacgtttcaaatgccaccgataagctcagcctaactcctgatttgaacgtagcctaaagcagtagttgaaatttgaacagtcgattcaactcttaaacatcttttaataagatgtgctgagtttaagttactctcctcatattcagcttttacctagagccaatatacccaagacatttcaactggctgtggtctagtatgcatagtgttttgttctgcagtaaaacaactcacctgttggccattgatagaacatatcatattcattcaacttgcttctttgcagtgcttggtttgaggagctccgtaagcggagagttgctgaattaagaaatgatctgaagaagtctgaaaattttattgggttagtgtttatgttgttacatttcagtatatgtctaattcttgatcttctttttagcatttcaaatttaatttcacaataatttagtttgaatataaggcctatgattattgatttcagaaaaatggtcattccatctggttttcatcttttgtacacttacataatgtgaaatctggtttcctttttcctgttccagatccctgcagtccatgatcaaaagcctcagcaatagcaagcatgatgatggcaactctgaatgtcacactagtcatactgagtcatgttcaaataatgaaaatacagctgataacaattcatcaagcaaagcattgtccaaagatagatcatctgctgctagttttacagaggaagcaagcaacagtcagaaatctgaaaaggtgcaacactgcgatactgattcaattcaagtgaacaatacttcagcagaggctttggtaaaaccccttgttgaaaaaaaggtttgtgctgaagatggtttgctttggggctctagaaagaaaagggccgtgagggataggaggacttttctgatggctgataatagttgcagagctggcgagaatacatctacatcacacatacagacagatggttcctctgaaggctatgcaaagaagggcttgaaaactccaaatctagaatctggtgtgtctgtcgttgagaaagcaaaaccaaacttggcagagattttgaaaactatatctactcaaagtgactgttatatgttgcaacgccgacttgatgtccaggtatgatggatagatcttgtaaattcagtcaagtcttgtacttatggaaaattgattagagttgcacgctgtttgttctgatagggtatcaagcaaatgaaacctttgtggatactaagagtttttagaacccattttagcgacttcaaaataaagtatacatgtttatataactgtttgtgctggaagaaactttcagtgcctttctgcagtttatgcatttcaagatgaaaaaatagcagacactggtatgtttacattctatcttatttgtcacttttgtcacacctgcagcggaagcggactagatacaagaagatgattcgccggcatatagacttccgtatccttcattcaaagatcaagagtggcgcaacatcttctaccaaggagcttctaagagacattctactgtttgtgaataatgtccttgccttctatccaaaggctacgttagagcacatggctgcaattgaacttcgaaatattgcattcagaacagtgcaagagagcgcaagcatgccctctaagagttgtggagtaacaggagcagcaactgcccctttagtgaagaagaacacccgacccgtgcagcctggaagtcatgggcctcatgatgcaaagagaagcaaagtttctttaaaggggactggaagtactgtcaagcagggtgaggccaagggatcgcgtggtggttcatcagtgacagctaatgtaaaaactatgcagagaaatccaccggccaagaagagaggcgttgggcggcctccaaagaatgggcagaagcgtgctgctgcacagcaagatagccctaacaaaggcaggaagaggacccgacgctgaacttcggctcaaaatgcccaaatatacaaaactgtgtacagacagcgtatagctagaccacatagtgtcgtctctttcagtgtttacttgttacctggcaaagactaggtcggaaatcagaatgttgtagcagggagtagtactgtatttcctgttgttgtcttaaaaggacagataggaaagaacatttttataggcagaaactatcaacttagatatatatagtatatctcttgctttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0565300, RefSeq:Os07g0565300