Difference between revisions of "Os07g0688500"

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(Created page with "{{JaponicaGene| GeneName = Os07g0688500| Description = Poly(A) polymerase, central region domain containing protein| Version = NM_001067237.1 GI:115474206 GeneID:4344356| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0688500|
 
GeneName = Os07g0688500|

Revision as of 20:42, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0688500

Description

Poly(A) polymerase, central region domain containing protein

Version

NM_001067237.1 GI:115474206 GeneID:4344356

Length

4834 bp

Definition

Oryza sativa Japonica Group Os07g0688500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29914724..29919557

Sequence Coding Region

29914724..29914930,29915031..29915108,29915179..29915277,29916695..29916757,29916838..29916918
,29917096..29917209,29917481..29917543,29917649..29917730,29917785..29917945
,29918511..29918672,29918798..29918981,29919508..29919557

Expression

GEO Profiles:Os07g0688500

Genome Context

<gbrowseImage1> name=NC_008400:29914724..29919557 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29914724..29919557 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcggcgagggccactgacccgctcgcctcgcgcgatcccccaaccttgccctcgtaccttcctccgcctcctcctcctcccttgccctcgccatcgccccaccaccgtctcctccccgctcccatggccccgatcctcctgcacctccaccccgccttcctcgcccaaatggactcccgccggaccacctccctcctccagtttttgaaggacgaggggggcatcccgtcgccggaggcggacaagaagagggagcaggtcatccgcaagctcaacaagattgtgatggactgggccaaggtggtggcgtacgagcagagggtgcccccaaggcgagcaaccgctaccgttttgacctatggatcatacacgttaggggctcatggacctgaatctgacattgatgcactatgtgttggtccttgtattgcaacactgcagtaccattttttcattgttctgaggcaaattcttgaagacaggccagaagtatcagaactgcagactgtcgaaagtgctaaggctataattacatctaatcctcatttgctccaaaaacttgattcgctgagttggagaagtttgtctggagttcgtgttaacgaacaaatcgtccagttagtaccaaacgcacagaagtttcaaattctgttgcggtgcatcaagctatgggctaagaggcgaggaattcactgccatttgctcggcttcttcgctgggattcatttagcgattcttgcagcttatgtttgtcagagatatccatatggcaccatcaatgtaagcttgcatggtcaaccaactaattgcaggcgtcctgatgggtctttcatgcccatactgttgccttgtactccaccggagttttgcacatccaatatgacaaaaggcaccttcaagaaaattagagaagagcttatgcgtggttatgctttgaccaaggagccatggaggcatgattttgagtgggtctggctttttgcaccgtttccatatgctacaaaatacgaagaattccttcgaattgctctatgtgccccaacgtctgaagagctacgcgattgggctggttgggtgaagtcccgcttcaaccttatcctcaagctggaaagtattggtgttgagtgtgacccagattccacagaggaagttgatcatacagtcttcgagccaagcattgtatgccactggggcctcatatataaaacaagcacccatattgatattagctcactgggagaagatttcatgaaggatgtcatcaatgatgtgtatggcaaggtgaaaggtcatgaatccaatggtgaatgcacagtggatttttcatggcagatctga</cdnaseq>

Protein Sequence

<aaseq>MASARATDPLASRDPPTLPSYLPPPPPPPLPSPSPHHRLLPAPM APILLHLHPAFLAQMDSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAK VVAYEQRVPPRRATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQIL EDRPEVSELQTVESAKAIITSNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQI LLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINVSLHGQPTNCRRPD GSFMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPY ATKYEEFLRIALCAPTSEELRDWAGWVKSRFNLILKLESIGVECDPDSTEEVDHTVFE PSIVCHWGLIYKTSTHIDISSLGEDFMKDVINDVYGKVKGHESNGECTVDFSWQI</aaseq>

Gene Sequence

<dnaseqindica>1..207#308..385#456..554#1972..2034#2115..2195#2373..2486#2758..2820#2926..3007#3062..3222#3788..3949#4075..4258#4785..4834#atggcttcggcgagggccactgacccgctcgcctcgcgcgatcccccaaccttgccctcgtaccttcctccgcctcctcctcctcccttgccctcgccatcgccccaccaccgtctcctccccgctcccatggccccgatcctcctgcacctccaccccgccttcctcgcccaaatggactcccgccggaccacctccctcctccaggttgctacatctatcaccatgctttcttgctcctgcttccgctgtttattttttttcccaccaattttgggtcactaactcgctcttgttgttggattagtttttgaaggacgaggggggcatcccgtcgccggaggcggacaagaagagggagcaggtcatccgcaagctcaacaaggtaataaagcttcaatattgcggtgcgcgccgcgatcgaatctctatctcatccgcgctgctcttcacagattgtgatggactgggccaaggtggtggcgtacgagcagagggtgcccccaaggcgagcaaccgctaccgttttgacctatggatcatacacgttaggggtaagcaaccaacacacaaaatatctgaatgattctttccaattgttgcttccgatatattgtgtgatatgttcccgacccatgctgctacagattagtacactatacttattttttgtgttgtcttcacaaaatcaccacacacattaccaattataagcacaactatattccacagagaggcagtttactaagcgcttaattgttactgggatagtgcaggatgttctaaggaatatatgcccaaccaactttgctgcattgttagttgtgtggtgtctggtgtatgtatcactgtaaagtgcactgccttgtcacctttctgttttcattaccttctattctaatatacttgtctcctattattgagccgggctggcctaagataggcggaccaaatttacttaagaaaggggtatgtacatatttacaaggttccaacttcgacaagaggctgtcgaagtaaaaggatgttgtcacaagggcaacttcccgaaagaaaaaacaattacatcatgctgttgttactctcctaaaactttgaaaaccccggcttctttccagaccacaacctcctctttaatcaaagcaaagaggctacccgctgtccggctctgactctggaaaacacgtgcgtttctctccttccaaaccatccaacagacaagcaaaactagcgtgtcaaaagcgcccctgcagctagtctgaactccttgccatgccaagagccaccattcccctagttccaaccctgcttcagccggcagttggacgccaattccagcccaacccttaatcatcctccatactctggtggcagtctcctattattgcaaaaacacatccatggcaatgaatgaatttccccctttgctcatctaggaaccaacttgcgcgtgttttaagaaaactcttgttggtaatggagcatcaggtggttgcaaaataggcactcaatgtgcatcaaaagttcacacttttcattttaaggggggatcatataattatctggcataagaaaattaaatagtagttgccatgactcatggacaggatcagaaagccaagaatgctcatcttattaggctgcaaaaagcatgtgcattatgcagtcattatgtagtcaataactcaatgtgcgcattatgtgtttaatattcttattcaagtcctgagggttaataacatatatgcatgtagattcaacactgagcaagttgacctaaacagtaatctaaattaaagctttgttaatcctttctttttttttcctcatgtgtatgaattaaagctttgtgtaagccttacaaattgaatcctgtagaacaaatgacaacttgtagaatataagatggcacaattccgcctggctttgacttattgagaagatttggctaacaattttctgtttctgaaggctcatggacctgaatctgacattgatgcactatgtgttggtccttgtattgcaacactgcaggtgggttttgttattattattttcagttctccttcaacctgagatcatggcagggtatttaacatgtgttgattttgcagtaccattttttcattgttctgaggcaaattcttgaagacaggccagaagtatcagaactgcagactgtcgaaagtgctaaggttccattgatgcgatttagattcagcggtatttctgttgattttacatatgctcagcttccagttatcgatgcatcagaggcaagtttattctgtaatcaatatgtagttacaagggtactcagttattgtactcgataaacaatctgaatttcatcgacttcctttatcctgcaggctataattacatctaatcctcatttgctccaaaaacttgattcgctgagttggagaagtttgtctggagttcgtgttaacgaacaaatcgtccagttagtaccaaacgcacaggttgatgactaatctaatttaagttaccagcagcccagcatcctcccttatattctcatttgctacattaagtcgcgtttagatacacttttctctgtattttcatatttgtcctgggtaccttccatgtacttatgttattgccttaagactgatctgtcactatgcagatttgttcatttttcttttcccatagaacacctcaaaatattttgtttcattttgtcagattccgcttttaacattttatctctgaaaatttgtgatgcagaagtttcaaattctgttgcggtgcatcaagctatgggctaagaggcgaggaattcactgccatgtatgtggtttaatatgctttaatggctgttattcagctatatgaccttcatatcttctttccgctctaactgttgtattttcacctatgatggtgttttttcagttgctcggcttcttcgctgggattcatttagcgattcttgcagcttatgtttgtcagagatatccatatggcaccatcaatggtctgttcaccatattctttgatatatttgctcactggaattggcaaattccagtaagcttgcatggtcaaccaactaattgcaggcgtcctgatgggtctttcatgcccatactgttgccttgtactccaccggagttttgcacatccaatatgacaaaaggcaccttcaagaaaattagagaagagcttatgcgtggttatgctttgaccaaggtcagcttagatccagttatgcttctctcatttcttgaacaataggagatttttagtgttgggtgataactgtgatgcatagttaaaaattgcaactcttttatataaccgaaaacaaatttccgacattcctatgtcatactcctgatctcttcgtgcatgccagtttgtcgatatgcttattcctgttctgatttcttcgttgaaccacaaatgatgcattcctccattcttgcatacgctcatggcttgcgatattagccattagtctgtactaacttgacacatggaacctatctcattttcgttattatgctttcggtaactcaaagagtgtcgactctttctcatattttgataggcatagctcattgataagcataggagcgacctcatctgtcgaaaaatggtcgaatctgtaactcagatttaaatctccgtgtacagttttcactgagtagtgattgttctcctctgcattattactagggtaatgtatatatcagtgcttgagtgcttggatgttatttgatcatgtcacagttactttgtttatccaatgcaggagccatggaggcatgattttgagtgggtctggctttttgcaccgtttccatatgctacaaaatacgaagaattccttcgaattgctctatgtgccccaacgtctgaagagctacgcgattgggctggttgggtgaagtcccgcttcaaccttatcctcaaggttatttcttggcttctgtcatgttccctttttttgttcctcaactgttctttactcattctttatcattgggaatgttgagcaagaatttacatgctatgttaacttcctcttttgttctgcagctggaaagtattggtgttgagtgtgacccagattccacagaggaagttgatcatacagtcttcgagccaagcattgtatgccactggggcctcatatataaaacaagcacccatattgatattagctcactgggagaagatttcatgaaggatgtcatcaatgatgtgtatggcaaggtgaaaggtacacattcaaagctgacaatgtccatcgttaggtcatcacagcttccgaaaagcttgtacagccactctgtgtacactccatacattcctcaatatatgctgggctaccagactccgaccgactacagtggcgcagctggctaggacttgtgtggatcatcgttatctgggacttgttgtgcgaccattggatcttacctgacgtttcatccattgtcggatatcctgaactggggctattcctactctctgttctgttgcacctatcacacacactatcagagcagatctggagatcagagtctgctccctttgagcttgcagttgcagtgtatatatactgaattcatgagaagtgtgaagtttccggctgctcgatctgacggctgcacaagtgaacatatggtagcgtgcggcagctagaaaaatgcagcaaaagcggtggcagtaaagtggtcgaggatattgtacgctgaacatccaaatgagttgcatttggactgaaaactggtgctggggtgcaggtcatgaatccaatggtgaatgcacagtggatttttcatggcagatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0688500, RefSeq:Os07g0688500