Difference between revisions of "Os08g0163500"

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(Created page with "{{JaponicaGene| GeneName = Os08g0163500| Description = Protein of unknown function DUF1005 family protein| Version = NM_001067602.1 GI:115474940 GeneID:4344739| Length = 5...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0163500|
 
GeneName = Os08g0163500|

Revision as of 20:44, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0163500

Description

Protein of unknown function DUF1005 family protein

Version

NM_001067602.1 GI:115474940 GeneID:4344739

Length

5193 bp

Definition

Oryza sativa Japonica Group Os08g0163500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3739196..3744388

Sequence Coding Region

3742776..3743353,3743430..3744171

Expression

GEO Profiles:Os08g0163500

Genome Context

<gbrowseImage1> name=NC_008401:3739196..3744388 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3739196..3744388 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccccagatttttgtcagactttcagttggacagcttggtctgaaactccccggtgcgaatgcgaggaaggcggcccggagcttccactgcgagatccggctccgaggattccctgtccagatagctcctgtccctctgatcaattattcagagttcaaccttgatccacacaccaatgccgccgtcttctccctcgacgaatctgaactgaaggcgctgtcggcaccggggtgtttcggagctcatgggtcttacctcgaggtcgcggtgtacgttggccggcgtggcgggcattgtggcattgtcaccgggatgaagaggctggttggggtggtcaggatggacattgggcctgagtggcgcgacggcaagccggtgatgcttcaccatggctgggttggcattggcaacggtgaggccaagccggagctgcacttgagggtgaagatggaggctgatccccggtacatctttgagttcgacgacgaggtcgcgctgaatccgcaggttgtccagctccatggccgcaaccggcagcccatcttcagctgcaagttcatccgcgacagacgtggatcacattcggatcagctgtactggtcgagctccggcggcgaggagaaggaggcggagatgatgaggaggagggagaggaaggggtggaaggtggtgatccatgacctgtccggctccgccgtcgccgcggcgttcatggcgacgccgttcgtggcggcgagcggctgcgacacggtggcgcggtccaaccctggcgcgtggctgatcgcgcgcgccggcgcgacggcgccggggtcgacgtcgtcgtcggcggcggtggagagctggcagccgtgggggcggctggaggcgtggcgggatcagggcggcgcggcgaggcaggacacggtgtgcctccggctgcggctcctccccgacggccaggacgcgtgcatgctggtggccgagacgccgctccgcagcgacaggggcggggagttcgccatcgacatggacaggcaggcgccggcgctggccgccggggcggagcactgcgcggcgagcctgggcgaggcgtgcgccggcggcgggttcgtgatgagctgccgcgtggagggggagtcccggagcagcaggccgctcgtgcagctcgccatgcgccacgtcacgtgcatggaggacgccgccatgttcgtggcgctcgccgccgccgtcgacctcagcgtcaaggcgtgccggccgttccggaggaagacgacggcgaccaagaagacggcctctgcctcatcgtcccctgatcccctcgagctcgacacgtag</cdnaseq>

Protein Sequence

<aaseq>MDPQIFVRLSVGQLGLKLPGANARKAARSFHCEIRLRGFPVQIA PVPLINYSEFNLDPHTNAAVFSLDESELKALSAPGCFGAHGSYLEVAVYVGRRGGHCG IVTGMKRLVGVVRMDIGPEWRDGKPVMLHHGWVGIGNGEAKPELHLRVKMEADPRYIF EFDDEVALNPQVVQLHGRNRQPIFSCKFIRDRRGSHSDQLYWSSSGGEEKEAEMMRRR ERKGWKVVIHDLSGSAVAAAFMATPFVAASGCDTVARSNPGAWLIARAGATAPGSTSS SAAVESWQPWGRLEAWRDQGGAARQDTVCLRLRLLPDGQDACMLVAETPLRSDRGGEF AIDMDRQAPALAAGAEHCAASLGEACAGGGFVMSCRVEGESRSSRPLVQLAMRHVTCM EDAAMFVALAAAVDLSVKACRPFRRKTTATKKTASASSSPDPLELDT</aaseq>

Gene Sequence

<dnaseqindica>3581..4158#4235..4976#atagctaagctatagtagctaacagtagcagcagctgtattcttctggttcttgctcttgttcttcttcttcttctccacctgcgattgattcggcctctgaaaatcgatcatggaattcgggttcggcggcggcgaggtcatcacgcagggcgggtcgtcgtcgccggcgggatggattccggtgagctcgtcgtcgtcgtctagaatcggagcatctgtcgcctgtctcttggctgagctctagtggtgtcctgcctgttgctgctgcttcttcttcttccttctcctaggtgttcttcacttcttctccgttgctgagttctgccaagaaaccaaccaattttgacaggtatggtccgaaatccaaattcaactcaatttcaattctttttgcctattgcttttgttcaattttaggggtttactattggtactaatctactatagtatatactgcatgatgttgatgtatgtatatgtattggtagttttttttttttgtttacatagaaatgtattggtagcttcctagtgtgttgtttgagcttgagagtggttgagaggatttttattccgataaggataattaatcaatccaacttctacatcaaagatgtatccggtcagagagaagtggttgaataatggatgagttggagattcttgggatctgagactggttattattcacttattcttctagataatccttgaaacaaaagcaagcgaaagaacatgacaaggatcaagggatggaaaggaggagaagaagcacatgcatggcgctagggccacaatctccattaccaaaagcacatttccttcctacataggagtagctttgcttcttttcatggtgttctctttttatccttttgcccctttcctcctcccctccatggaatttgtttcctccaagcaacaaagcttgcaagaaaagaagtcactggtcttgttcaatcttgcaacaagactacatcttttcctaatcagtttttactttaccatgccagactgtttccactaccctttctttccccttaattaggacctactatgatcttaatctgcacacctcaaatcaattacacaatctaattaattgtacaaattgggggtgtagttgtcattttcttgaccaatctatacatgaactgaatcaacgaagaaaggaaggatgaaaggaagaattaatccaagaaaggcagtggcatgttcttgaatcttgatcacatcagaaatccatggagaacttggattggagcaagaaagatgaagtatcttttcttttgatggttagctagctagctgctcttggatttgggcttggagctgcagctgaggtcgacggcggtgccattgggccagaagaatcggaggtcgcagcgtaggcgcgtccagtacttgaacgggacgaggccacccaccttccaccgcgtgctcgcctggccggacacggtgaacggcacgacgccgtcggcgagcgccgcctccatggcggccatgccggagctgtccagcgggatccccgacgagcgcaccacgtagcccagcggcagcgaccccttgggcgggacgtcgaacgggtcggcgcgaaggatggcgatgaccacgcggtggaacacgaggcggagctcgaagtcggagaaggtggcgcccgacctcgcgttgccgttctcggcggcgacgcccagcgacagcgccgcctccagcgccccttgctggtcgtagacgaggtcgtcgagccgcgccgaccggatggcgaggtacggcgcccgcggctgcagcagcagcaccaccaccagcacggccaccgccgcgacgagcaccaccacggcgagcaccgtgaacaccaccgccgccgtccactccagcgggcccgaccggtgcgccctccgcccccgcgggtggtgcgtcacctggtcccgcggcggctgccacgaaggctgctgttgtctggcctcctcgccgccgttgccgtaccgctggtcgggggggtaatcaccccggtgatcatggtggacgccgccgccgttcgccgcgcttaacattgtgagatgcagcgaagcttttgctgcggctgcggctgcggctgcggctgcggcggcggccgccttatgtgctcggccttgtccacgccgtggcgtggcgtggcgtgcctgcgccggaggaggacttgttggtggagaggaaggtttggaatctccactttgcacgctgatcatacgacagaggaggaagctttgcttggagggttaaagaaatgggagcaaagggagaattctgatcctgggctacctcacccatgcaccaccattgctgccatggccgccgccccttttcgcgacacacgggctagcttatgtcgcgccgcgccattgatgctgctcttcttggatgcttttctttggttgcacaagccttttttttttttttttgcagttgcagtgacactgtcagtgcctgactgatgagaggagctttgaacagaggtggcatgctaatggcattggcaattgccattgataaccactcaatggcatgattgcaaagcaccagatgcctctttttctttcttcctttcttctccctttcagttgtttaagctaagaggtgttgagtggcattagcaatgcttgccttttttagtgcttgcactagggattgtcaaaggggaagaatatgctacttgatcaacattcatctttctttaaattttgtcaaggatcccaaaggtttcacaaaaaaaatgggggaaaggcaagcatctaggcgtcagttgcgtgttctttttttagtggggaatgtttaaggtgaactgtaccttctattagatcaaaatcacgattaaagacatgtctgaatgctaattccaaatgctggcaaaatctactttgagttgagaaaaaaaaaacagctaacttactaagtaaatcatttttatttcctaaataattagttcttttacttttaagtttttttttggctgatcttaaaccttagattaggtggacctaataaaacttggttacagatggagaaattgtgcctgtgatctgtaattttgaagtgatgagctgaatttggctatggtctaatctaatgcaatcagcttctatctggcgctttaagcctatgattttgaagtgatgagctgaatctggctacggagttaggcttttactttctgtagaatttggtcatacctacaagggtaaaagtgatgtaattttttgaatggaatctgaaagtgatatcttcatgcaacagcaatgttgctacttttcatgtgccattcctatagcacatagctgatactgaaacatgctctatgcatttctttctggatttgctactatgtagtctttttcatagttccatatcacttggagcatatactgtcataccatacactactattggaagaattttaagatcagctgcacacctagtgctaatttgcagaattcatttcttttcctacaattgattgttacatcaaattatatctgacttcaatgatttgtgaatttttcagcatgtgccatggaagtagctaatcttcagtgacacgaagaatggatccccagatttttgtcagactttcagttggacagcttggtctgaaactccccggtgcgaatgcgaggaaggcggcccggagcttccactgcgagatccggctccgaggattccctgtccagatagctcctgtccctctgatcaattattcagagttcaaccttgatccacacaccaatgccgccgtcttctccctcgacgaatctgaactgaaggcgctgtcggcaccggggtgtttcggagctcatgggtcttacctcgaggtcgcggtgtacgttggccggcgtggcgggcattgtggcattgtcaccgggatgaagaggctggttggggtggtcaggatggacattgggcctgagtggcgcgacggcaagccggtgatgcttcaccatggctgggttggcattggcaacggtgaggccaagccggagctgcacttgagggtgaagatggaggctgatccccggtacatctttgagttcgacgacgaggtcgcgctgaatccgcaggttgtccagctccatggccgcaaccggcagcccatcttcagctgcaagttcatccgcgacagacggtgagaggacgccattgacgccgtcgtgctcgtcttggtgatcatgtcgttgatgttgttcttgtttggttggcagtggatcacattcggatcagctgtactggtcgagctccggcggcgaggagaaggaggcggagatgatgaggaggagggagaggaaggggtggaaggtggtgatccatgacctgtccggctccgccgtcgccgcggcgttcatggcgacgccgttcgtggcggcgagcggctgcgacacggtggcgcggtccaaccctggcgcgtggctgatcgcgcgcgccggcgcgacggcgccggggtcgacgtcgtcgtcggcggcggtggagagctggcagccgtgggggcggctggaggcgtggcgggatcagggcggcgcggcgaggcaggacacggtgtgcctccggctgcggctcctccccgacggccaggacgcgtgcatgctggtggccgagacgccgctccgcagcgacaggggcggggagttcgccatcgacatggacaggcaggcgccggcgctggccgccggggcggagcactgcgcggcgagcctgggcgaggcgtgcgccggcggcgggttcgtgatgagctgccgcgtggagggggagtcccggagcagcaggccgctcgtgcagctcgccatgcgccacgtcacgtgcatggaggacgccgccatgttcgtggcgctcgccgccgccgtcgacctcagcgtcaaggcgtgccggccgttccggaggaagacgacggcgaccaagaagacggcctctgcctcatcgtcccctgatcccctcgagctcgacacgtagccgatgcatccatgtcctactagtcttcgtcgtcgtcttcttcctcgcacagctggcgaagcaccgatggatcgagcacccatggcggccatcaaaatccttctgtaaattcactttgaaagaattggacactcccttttccgttcgttcaaactttgttgtatgaattttgtagagttcactaaaatccaaccctgaatctgcgcctcattcgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0163500, RefSeq:Os08g0163500