Difference between revisions of "Os08g0169300"

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(Created page with "{{JaponicaGene| GeneName = Os08g0169300| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001067621.2 GI:297608045 GeneID:4344762| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0169300|
 
GeneName = Os08g0169300|

Revision as of 20:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0169300

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001067621.2 GI:297608045 GeneID:4344762

Length

2533 bp

Definition

Oryza sativa Japonica Group Os08g0169300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4052156..4054688

Sequence Coding Region

4052156..4052397,4052679..4053069,4053345..4053626,4054656..4054688

Expression

GEO Profiles:Os08g0169300

Genome Context

<gbrowseImage1> name=NC_008401:4052156..4054688 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4052156..4054688 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccctcaagtgcgctatcgacctcggaatccccagcgccatccaccgcaacggcggctctgcctccctgcccgacctgctcgccaccctcccaatcgcagagaacaagaggccattcctgcatcggctcatgagattcctaactgtgtccgggatcttcacctcggctgatgatggcgtgtaccagctcacgagggtgtctcgacttctggtcgatagcatcccgctcaacctgctgccgtcatttctctgcttgggcgagtggtttcgagatggcggtgataccacgccgttcgcaatggcgcatggcatagatgtatggggcgctatgagcctcgatcgagctcttgcagcgggtttcagcgcgtccatggcagccgacagcaagttcttggcggagatagccatccgcaggcacgttgaagcgttcatgaatgttagctcgctggtcgatgtcggtggcggggatggctcgatggcgagggccattgtcaaggccttcccacacatcaagtgcctggttctagacctaccacatgttgtccgtggcattcccgctgatggttttgttgagtatgttgcgggtgatatgatggattttgttccaccagctaatgttgtgctactcaaacttgtattacatgattggagtgatgaggattgtgtaagaatcctgtcaagatgcagagaggctatttcaaatagggaaggaggcaaagtgataattatagacacagtgattggatcacaatctcaacagatatatgaagctcaacttttcttggatctatgcatgatgacagtgacaacaggcaaagagcgagaagagaaagagtggcatatgatatttctgaaagcaggctttacacaatacaagattttacccatcttggggattaaatcactcatagagggctacgctcagaaagaagaagaggaggtctaa</cdnaseq>

Protein Sequence

<aaseq>MALKCAIDLGIPSAIHRNGGSASLPDLLATLPIAENKRPFLHRL MRFLTVSGIFTSADDGVYQLTRVSRLLVDSIPLNLLPSFLCLGEWFRDGGDTTPFAMA HGIDVWGAMSLDRALAAGFSASMAADSKFLAEIAIRRHVEAFMNVSSLVDVGGGDGSM ARAIVKAFPHIKCLVLDLPHVVRGIPADGFVEYVAGDMMDFVPPANVVLLKLVLHDWS DEDCVRILSRCREAISNREGGKVIIIDTVIGSQSQQIYEAQLFLDLCMMTVTTGKERE EKEWHMIFLKAGFTQYKILPILGIKSLIEGYAQKEEEEV</aaseq>

Gene Sequence

<dnaseqindica>1..242#524..914#1190..1471#2501..2533#atggccctcaagtgcgctatcgacctcggaatccccagcgccatccaccgcaacggcggctctgcctccctgcccgacctgctcgccaccctcccaatcgcagagaacaagaggccattcctgcatcggctcatgagattcctaactgtgtccgggatcttcacctcggctgatgatggcgtgtaccagctcacgagggtgtctcgacttctggtcgatagcatcccgctcaacctgctgccgttcgcgagaggggccgtcaatgaaaacagtcggaaaatatcggaaacggtatcattattttatttttcttttcgaaaacgaacggaaacggttagaaaatttctatatttacaaattcatctatttagtgtcgacttcaatgccacgctgacaggaattaaaaaatactgaattttaaaaagggtaaccattggtaaaaatattattattatattagttttgcggaaacagtatcggtacagtcgggaaatttccataccgttttcacccgtaatttcaggtcatttctctgcttgggcgagtggtttcgagatggcggtgataccacgccgttcgcaatggcgcatggcatagatgtatggggcgctatgagcctcgatcgagctcttgcagcgggtttcagcgcgtccatggcagccgacagcaagttcttggcggagatagccatccgcaggcacgttgaagcgttcatgaatgttagctcgctggtcgatgtcggtggcggggatggctcgatggcgagggccattgtcaaggccttcccacacatcaagtgcctggttctagacctaccacatgttgtccgtggcattcccgctgatggttttgttgagtatgttgcgggtgatatgatggattttgttccaccagctaatgttgtgctactcaaagtaaataattaaattgtggcatgcatgtgttttcatatgttgattttttggtcctcttagtaaattgacatattcaaaatggaggtggatatatagtgttggtggtagatgatatgatatttttgaaactctttttttttattaccatcttcgtcttttggtaagttctttgaaaaagaagaatatatacccaaatagttagtactaactaaaattgagaccattcatatcagcttttctaactgaagtttttactacttatattgtggtgctagcttgtattacatgattggagtgatgaggattgtgtaagaatcctgtcaagatgcagagaggctatttcaaatagggaaggaggcaaagtgataattatagacacagtgattggatcacaatctcaacagatatatgaagctcaacttttcttggatctatgcatgatgacagtgacaacaggcaaagagcgagaagagaaagagtggcatatgatatttctgaaagcaggctttacacaatacaagattttacccatcttggggattaaatcactcatagaggtatatccataatgttttggataagaccattctttaaacaaggtatatatttaaacaaatactacaaatactacaaatgtacattgtgtaataagtaatacagttatctctcgagtaataagtatgtacattgtgtgtacttgtaatgttattacaagatgctaaatatttaatgtcgatcttaccggccggaatctcatacttttagactaagtgttacctcagttgattaaatctgtgcggtagaacctgtttatctgggcttgactcatagactcggcacatgtggtaacataggattaaatttcatgggaacatatatatcttatgcacgcaagttttccgtgcacacttcatacacactaactagcaaatgtcacgaaaaaatctaaaaaaaatgaatatttactcctaatagtattacacatatttacaaagtctcatattcaaaaaattatattttagccgtaacaaaaaaaagttaaaactctaatagttttaagggtaaaaatttgttagaattttgtttttttttacggataaaatataatgattttgaaagtaagatttcacacgtaggtgtaatactactggaagtatgtgtccaattgtttttagaattttctgtgacatttgctagttgatgtgcacaaaaaatttgtgtgcataacatacatttccaaatttcatattgcaatctatgcacacgtggatgtgttcggatgtcaaagcatatatgattgcactgcgtgagattagacatttactctgaactcgtagatctagagggtagttcaaatggtccaccgcccacctataaaaaactcatactaaaaaaataaatcatgtataaagtactattcatgttttataatataataacaataaatggtttcgatgttggtaaatgtcggtgtgaatgcgttcgactaacatgggtcgggttaggataactatgccaagaagcatatattttatctatttatatgaaagtgattaaggtcaaccctagccaatactgacgaccagggctacgctcagaaagaagaagaggaggtctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0169300, RefSeq:Os08g0169300