Difference between revisions of "Os08g0176633"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0176633| Description = Disease resistance protein family protein| Version = NM_001188480.1 GI:297726090 GeneID:9269960| Length = 5745 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0176633|
 
GeneName = Os08g0176633|

Revision as of 20:45, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0176633

Description

Disease resistance protein family protein

Version

NM_001188480.1 GI:297726090 GeneID:9269960

Length

5745 bp

Definition

Oryza sativa Japonica Group Os08g0176633, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4465032..4470776

Sequence Coding Region

4465032..4465102,4466900..4468950,4470472..4470629,4470726..4470776

Expression

GEO Profiles:Os08g0176633

Genome Context

<gbrowseImage1> name=NC_008401:4465032..4470776 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4465032..4470776 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggggccaccgccggagtggtggggcgaagaggagggcggcacgtcattcatgcggaagcggctgaggtacttagttgtaatagatgatgtatgggctacagaagcatgggaaactattaaacttgcattgctgagcaacaactgtgacagcagaataatcacgacaacacgtaacactgctgttgcatcaaagtgctcttatcatggaggctatgtttatcatatggaacctctcagctttgtcgactctaaaaggttgttttttaaaagagcttttggttcagaaaacctatactatcctcatctggaagaagtttctaatggaattataaaaaaatgtggtggcctaccattggcagttataactatttctagtttgttggctgatcagtatgcaaaagatgaatgggtgagggtgctagcagcaatcggttctgcacttgcaaaggatcctaatgctggaaatatgagaagaatattgtctttcagttactatgatcttccttaccatgtaagaacttgtttattgtacttaagtctatttccagaagatcacaagatcaacaaacagcggttgataaacagatggattgctgaaggcctcattcatgaagaagagggaagtgcatataaaaccggtgagcattatttccatgaactcatcaatagaagcttgatccaaccagttgatgtccaatatggtaaaccagtggcatgtcgggttcatgacatcattcttgatttcataacatgcaaggcagctgaagagaacttcaccactttattagatacaacagagttcaaacccatcccaattgacgaacctcgtagagtatatttccagaataacagaaaggaaaacgtcatcatggcaacaaacctgagtctgaaaaatgtccgatcacttactatatttggttactttgtgaaaactccatcattgttggatttcaaagttctacgtgtgctagatttaaaagattgtagaaagttacaaaaccatcatcttactggtatagaaatgttgcttcatctgaaatatttgagtctcggatcaaggtatataactgagctcccaaaaaaactcggagaattacgatatttggaaacactggacataagagagactatgataaaatcccttccatcagcaattacaacattccagaggttagttcgtctacttatcaatcatgacactacatttccagatggaattggaaggatgcaaagcttggaagagttacaaacttttgacatttttacatactcatcaagaaattctttacaagaattcggccagcttacaaaactaagaaagttgagggtgacatggaaccttgataactcattagaagatcatagaacaaccatagaaggttcaatgaaacatttattatctctatgtgacctacattatctccttatctggaatgattgtcctggcctctcactggattcatggtgccctgttactctcagtagcctccgggagttccagatcgaatacggtagcatagctaatgttccgaaatggatgaacatgcttgcatgtctcacagaattagatctcactctgtgcagcacaaaacaggaagatattgatatccttggggagatacctgccctgcttgttctcaggctcactacttctcatggcaccaatggaaggatcttcatcagcagctacaatgctttccgatgcttgaaatacttctttcttcacataaatatgtgtggaacattattggaatttgaagaaggatctatgccaaagctccaacaccttatgatcaagttcaatgcacatagatggaagtgtctgaatggtgcttctgatttaggcatccgacatctctccaacctcaccatggctgaggtcattattggtacagattatagtcatggatgctataacccagaggaagagttaatgaaaagcagcaccaattttgctgctagtttgatccagtctgcagttgagacacttcccaaccgtcctgttctccgttttcagttacagcgtgaagcatgcatacagtttgaagagaggagtgtgaattatgaaatagaggtcaatctaggcgaagtaagagatgttggcaaggtggatcaagttcctttcctttctgttttttcttcatctagcatgactgagaaggaaatgatacaacctttctgcgttcttgacccaatcctgtgtggtggtagggacgggaggggaagggctctccgtgccagggtggtcaagacagcgttaagcaattatccgaaggagattaatataggcttgggcgggtccagaaaatgtattagagggggctaa</cdnaseq>

Protein Sequence

<aaseq>MWGPPPEWWGEEEGGTSFMRKRLRYLVVIDDVWATEAWETIKLA LLSNNCDSRIITTTRNTAVASKCSYHGGYVYHMEPLSFVDSKRLFFKRAFGSENLYYP HLEEVSNGIIKKCGGLPLAVITISSLLADQYAKDEWVRVLAAIGSALAKDPNAGNMRR ILSFSYYDLPYHVRTCLLYLSLFPEDHKINKQRLINRWIAEGLIHEEEGSAYKTGEHY FHELINRSLIQPVDVQYGKPVACRVHDIILDFITCKAAEENFTTLLDTTEFKPIPIDE PRRVYFQNNRKENVIMATNLSLKNVRSLTIFGYFVKTPSLLDFKVLRVLDLKDCRKLQ NHHLTGIEMLLHLKYLSLGSRYITELPKKLGELRYLETLDIRETMIKSLPSAITTFQR LVRLLINHDTTFPDGIGRMQSLEELQTFDIFTYSSRNSLQEFGQLTKLRKLRVTWNLD NSLEDHRTTIEGSMKHLLSLCDLHYLLIWNDCPGLSLDSWCPVTLSSLREFQIEYGSI ANVPKWMNMLACLTELDLTLCSTKQEDIDILGEIPALLVLRLTTSHGTNGRIFISSYN AFRCLKYFFLHINMCGTLLEFEEGSMPKLQHLMIKFNAHRWKCLNGASDLGIRHLSNL TMAEVIIGTDYSHGCYNPEEELMKSSTNFAASLIQSAVETLPNRPVLRFQLQREACIQ FEERSVNYEIEVNLGEVRDVGKVDQVPFLSVFSSSSMTEKEMIQPFCVLDPILCGGRD GRGRALRARVVKTALSNYPKEINIGLGGSRKCIRGG</aaseq>

Gene Sequence

<dnaseqindica>1..71#1869..3919#5441..5598#5695..5745#atgtgggggccaccgccggagtggtggggcgaagaggagggcggcacgtcattcatgcggaagcggctgaggtgcgcgaggggggaggtgtcgccggggcagccaaagcctcattgacgggagggagggaggacgacggtgattgggggaggacacgccgcgcggcgcctcccagccgcgtgtcccttcctcctctcctcccctcggcgtcgcctcctagccgcgcgtggccaagccaccgcgccgcaccaccttcctcctgagctgtgcaacctccctcccgtgcgcgcgcccggccgtgccgccgcgctcggccaccgccccgctgcctcgtgccacgcccggcctgggcagcctcctctcccacaccgagctcccctcccttatcccaccgctgcccctctcccggcgccatgccaagctgcgccgcgcctacacgccgctgtcgcctcagccgcgtcgtcgcgtgccggctgcctcgcacgcgaccgcccgcgccgacgccactgccctgagctcccccgtgccggcctctcccttccatcgccgccgcccgtttccgctcgagccaagacgacgccgccgccgagttttcctctcctctcgacagtcgctagctcctctctcctgcaccgccgccaggtcgccgaccccggccacagcctcctcgcaccggtcggcaaccgcctctccccgcctctctcctgcgccgccggcaggtcgccgaccccgcccacggcctcctcgcaccggtctcgctggctccctctctccctttgcctgccacatatgcatctagaggtggaggaaggagagaaaaaaggaaaattaaaatttgtgccatgtcatcgtccatgtggcgtgccacgtaggcaagaccacggtcaaacgcggctttggatcgggatgatacaataaaccaagtttagagacctcgatgtgcgctttgcaagttcgtggacctaagtgaaacctcgttacaagtttaaggaccgctagtgcaatttaccatggtttccgtgtccaactttgactgtccgtcttatatgaaatttttttataatttgtattttcattcttgttaggtgataaaacatgattaatattttatgcgtgacttgtctttttaattttttttcataattttttcaaataagacggacggtcaaacgttggacacggaaactagggtttttcttttttttttgactgagaaagtagtatcttaccaaattgcaggcccactagtgataggatattactaaaaggtttcatgaactctcttgaacctcatcttgccatttcataaagagtcgcatttaattctaccaaagtgatttttatagtccttgtttagccaacctctcctctatagtatgtctgctgtccagactctgttccacagaaccagccatgtaaagaatttgcatttcggtggcgcccaacattttcaaattgtctcattgaaaattgttctcgctgcccctaggaattggagtctgtaaactgtgctgtgtattccctgctcagggtgagcttccagacgatgctgttgtggcgttgtcccaatggggccatattgtgtatcgaggttcatagctcaacttattgtcgaaggtgttctcccaccgtaatttggaatgaatttaattgatctcatacacattcttgctgaggtcagggtccatttttggttgaatttttttgtatggtccattcttgaaataaatttctgaaaagatccaaatagtcaaaatttcagcaaagagacaaccacttccctcttcctgttctttcaccttcaccatagcaaaatgcctaatgaaatcataacctttaagcactgattcaaatctaaaatcctgcaggtacttagttgtaatagatgatgtatgggctacagaagcatgggaaactattaaacttgcattgctgagcaacaactgtgacagcagaataatcacgacaacacgtaacactgctgttgcatcaaagtgctcttatcatggaggctatgtttatcatatggaacctctcagctttgtcgactctaaaaggttgttttttaaaagagcttttggttcagaaaacctatactatcctcatctggaagaagtttctaatggaattataaaaaaatgtggtggcctaccattggcagttataactatttctagtttgttggctgatcagtatgcaaaagatgaatgggtgagggtgctagcagcaatcggttctgcacttgcaaaggatcctaatgctggaaatatgagaagaatattgtctttcagttactatgatcttccttaccatgtaagaacttgtttattgtacttaagtctatttccagaagatcacaagatcaacaaacagcggttgataaacagatggattgctgaaggcctcattcatgaagaagagggaagtgcatataaaaccggtgagcattatttccatgaactcatcaatagaagcttgatccaaccagttgatgtccaatatggtaaaccagtggcatgtcgggttcatgacatcattcttgatttcataacatgcaaggcagctgaagagaacttcaccactttattagatacaacagagttcaaacccatcccaattgacgaacctcgtagagtatatttccagaataacagaaaggaaaacgtcatcatggcaacaaacctgagtctgaaaaatgtccgatcacttactatatttggttactttgtgaaaactccatcattgttggatttcaaagttctacgtgtgctagatttaaaagattgtagaaagttacaaaaccatcatcttactggtatagaaatgttgcttcatctgaaatatttgagtctcggatcaaggtatataactgagctcccaaaaaaactcggagaattacgatatttggaaacactggacataagagagactatgataaaatcccttccatcagcaattacaacattccagaggttagttcgtctacttatcaatcatgacactacatttccagatggaattggaaggatgcaaagcttggaagagttacaaacttttgacatttttacatactcatcaagaaattctttacaagaattcggccagcttacaaaactaagaaagttgagggtgacatggaaccttgataactcattagaagatcatagaacaaccatagaaggttcaatgaaacatttattatctctatgtgacctacattatctccttatctggaatgattgtcctggcctctcactggattcatggtgccctgttactctcagtagcctccgggagttccagatcgaatacggtagcatagctaatgttccgaaatggatgaacatgcttgcatgtctcacagaattagatctcactctgtgcagcacaaaacaggaagatattgatatccttggggagatacctgccctgcttgttctcaggctcactacttctcatggcaccaatggaaggatcttcatcagcagctacaatgctttccgatgcttgaaatacttctttcttcacataaatatgtgtggaacattattggaatttgaagaaggatctatgccaaagctccaacaccttatgatcaagttcaatgcacatagatggaagtgtctgaatggtgcttctgatttaggcatccgacatctctccaacctcaccatggctgaggtcattattggtacagattatagtcatggatgctataacccagaggaagagttaatgaaaagcagcaccaattttgctgctagtttgatccagtctgcagttgagacacttcccaaccgtcctgttctccgttttcagttacagcgtgaagcatgcatacagtttgaagagaggagtgtgaattatgaaatagaggtcaatctaggcgaagtaagagatgttggcaaggtggatcaaggtgaaacaagagttggatcaactaaagagccactttacacgatatttgaggtattaatggattttatcgatcggttcaccatcaaatagttatttatgtttgttttatgatgctttttactactccctccgtttcaggttataagacgttttaactttagtcaaagtcaaactgcttttaagtttgaccaagtttgtagaataaagtagtaacattttcaacccaaaacaaatttattatgaaaatatattcaattattgatttgatgaaactaatttagtattataaatattattatactactccatactcataaaggaagtcgtttaggacaatgtttaagtcaaaccttgaaaatataaatcatgaataactctcaatttgttaagtttgaaaatgtaaaaattatatgtatagatttgtcttaaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaataagaagtcaatgttatgttttggagactgagtcgctgtcctaaacgacttcctttacgagtatggagggagtatttgtttataaacttggtcaaaacttaaaatagtttgactttgaccaaagtcaaaatgtcttataaccagaaatggagagaccagaaatggagagagtacttagttattttttataatcatactccatccattccataatataagacacaactacattttaaagttgtttcataatataaggcatgtatgcaagcatatcattaactagcacatctttttcactaaaatattattatgtaaatttaagtaaaaaaatattattatgtaaatcattcacgatcaagatctctaattttattgggtgaatatattctatttattagggaaacccaaactatgaggtgataataattatttcttagtctttgagttaagggtgtttgtgccttatattttagaatggagggagtatttatttgtaccaccacatcaaatactagtactgaatatattatttttctaatggtagtagtagaacacataaatcaacgatggacaacactttctaccacctacgggcccctttgatttggaggaaaaatataggaattttggaggatttcaatcctacagaaaaattttctatgaagctctttgaaacaaaggattgaatcctatccaatccattgaaattcctatggaatggacaatcctattttgaaggaaatttagcaagagcttcaacctcctggtaactttcttttgagtctatctctctcatccaatttctgtatttttcctatagttcaatcaaacgatcattcctatgtttttcctgcgttttgcaatcctctgttttacacttacattcctaccaaaattttacgtttttcctatttctatgttttcttaatcctgcgattcaaaggggcaaatgtgcttatagattaatgtatgtttctcgtagataatatgcttttttttatcatccttctcatcattcatttttattttcttttagttcctttcctttctgttttttcttcatctagcatgactgagaaggaaatgatacaacctttctgcgttcttgacccaatcctgtgtggtggtagggacgggaggggaagggctctccgtgccagggtggtcaagacagcgttaagcaattatccgaaggtataaacagattctcatgcacagatgcactggttacaacttataggtcggactgatacaatagtgtgactagtggcttgtttttcttgattgcaggagattaatataggcttgggcgggtccagaaaatgtattagagggggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0176633, RefSeq:Os08g0176633