Difference between revisions of "Os08g0180300"
(Created page with "{{JaponicaGene|
GeneName = Os08g0180300|
Description = DEAD/DEAH box helicase, N-terminal domain containing protein|
Version = NM_001067673.1 GI:115475082 GeneID:4344820|
...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0180300| | GeneName = Os08g0180300| | ||
Revision as of 20:45, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0180300 |
|---|---|
| Description |
DEAD/DEAH box helicase, N-terminal domain containing protein |
| Version |
NM_001067673.1 GI:115475082 GeneID:4344820 |
| Length |
7687 bp |
| Definition |
Oryza sativa Japonica Group Os08g0180300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:4699671..4707357 |
| Sequence Coding Region |
4700819..4701419,4701526..4701699,4702382..4702458,4702553..4702627,4702714..4703710 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:4699671..4707357 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:4699671..4707357 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcttgctggcaatatgaacaacgataactatattgacttgagttcagacagtgatatagattttgacttcgactcagatgattcagttggtggtttggaccaggagctagcttcatcttcttctaggcctactgaaaatataaatggtcaatatagaactctgccaccttcttttacaaatggtagacatgttgataacgctcgtcatgcgttaggttcaggtgacagagcttatccgcattcaagttcttatagggggtcaccaaatgattctgcaagggcaactcctgcttccaacagaactgatattgtagtcaagaagcacaatggttttgcatcggaagaaaatgataatggcaagaggattcttccctcatccttttcaaatggccgcacaacaaatgctatgcatccagtggttgcaagtgagacacgcaaattcccaccatcttttaccaatggaaattcacaaagattggctgaaaataggatgggaaaaaatgttgccaatggaattggggagccttcatcgtcaaggtttccgagccgaagttcttttggtactgacaacaagaaggtcatcacagacagtgacaatgaggatgtctatgtatatggaagctccagttcacatagggttcttcctccatcttttggtcgcaatagttctgctaatcacagcgaatttgctaatggcattgatatgcaaggtcgtctgaacctggaaaataggattatagattctgacgagagagcggtgtaccaggaagcactacagaatattatccaggataaaagggaagatgatctgcctgagggtgttctgtcagtacctctgcttaggcaccagaaaatggcattggcttggatggtttcgaaggagaatagctctcattgtgcaggtggaattcttgcagatgatcagggtcttggcaaaacagtgtctacaattgcccttatacagaaacagaggatccagcagtctaagtttatgtctgttgattcagatcgtttaaaagctgaagcgctaaaccttgatgatgacgatgaggcagcgcctgttgcggataataagggggagcagactaagaatgatgaacccaggaaggatctaggagctggttcgtcatcaacagcagctggtactggtgacgttgaaacatgtgctagcctaatgaatactgctccagataagacggttgaaagaaatgttgaacgtaagaagaagagtaaggcaagcacatcatctactatgcaatccatgacaaggcctgctgcaggtactctagtggtgtgcccagctagtgttcttaagcaatgggcgaacgaattgactgacaaggttggtgaaagtgctaaattgtctgttttggtctatcatggtggctcaaggaccaaagatccaaatgagttggcaaaatatgatgttgttatcactacatacacaattgtggccaatgaagtgcctaaacagaatgccgatgatgacactgatcagaagaatggtgaagaatcttctgctggtaataagagaaaacaaccacccaaagcacagagcaagtcgaagaaaaagaaaaagaaacttaaggattcagacatttaccttgccagtggcccagttgcaagagtgcgatggtttagggttgtccttgatgaagctcagacaataaagaactttcgaactcaagtggctaaagcctgttgtggattacgtgcaaaaagaagatggtgcttatcaggaacacctatacaaaatgcaattgatgagctctacagctatttccatttcttgaaatacgatccatattctacttataattcattttgtacaatgataaagcacccgattgctagaaatgcagttcatgggtataagaaacttcagactgtgttgaggatagttctcctgcgccgcacaaaagaaactctgattgatggtgagccaatcataaagctacctccaaagacaattaatctggataaagtagattttacaaaagaggagcgagctttctatttgacgctggaagaacgctcgcggcaacagttcaaggcatacgctgctgctggtacactcaaacagaactatgccaacattcttctaatgctgttgcgccttaggcaggcctgcgatcatcctcttcttgtgaaggggcatcagtcagagtataaaggcgatggttctatagaaatggcaaagcaacttcctaaagaaatgataataaatttgcttgcaaagctggaagttggagagttttgttctgtatgcagtgatgtacctgaggatgccgtcgtgacgatgtgtggccatgtcttctgctatcaatgtatatacgagcggataactactgatgagaatatgtgtccctcccctaattgtggaaacacattaagtaccgattcagtattttcgtcaggagcgttaaggatttgcatgtctggtgtatccagttctcatgcatcagggagttcatcattagatgacgagtcatcttctattagtcaaactagttacatatcctcaaagatacaggcggcaatcgatatactgaattcgatcattaacacctatgcccttaccgacagtgataccgtcgaatcaaatcctagccgagtggccccagtgaaagccattgtgttctcccagtggactggcatgctggatttgctggagctttcattgaatagcaatctcatacagtacaggagactagatggaacaatgtccctcaattcaagagataaagcagtgaaagattttaacacagacccagaggtcagggttatgatcatgtcactgaaagcaggtaatcttggtctcaatatggttgctgcttgccatgtaattctccttgatctttggtggaatccttatgctgaggaccaggcaattgatagagcacacagaattggtcagactcgtcctgttactgtctcccgtttaaccattaaagatacggtggaagatcgcattttagctctgcaggaggaaaagagagccatggttagctctgcttttggcgaagacaaatcgggtggccacgcgactcggctcaccgtggatgatctgaagtatctatttaggttttga</cdnaseq> |
| Protein Sequence |
<aaseq>MLAGNMNNDNYIDLSSDSDIDFDFDSDDSVGGLDQELASSSSRP TENINGQYRTLPPSFTNGRHVDNARHALGSGDRAYPHSSSYRGSPNDSARATPASNRT DIVVKKHNGFASEENDNGKRILPSSFSNGRTTNAMHPVVASETRKFPPSFTNGNSQRL AENRMGKNVANGIGEPSSSRFPSRSSFGTDNKKVITDSDNEDVYVYGSSSSHRVLPPS FGRNSSANHSEFANGIDMQGRLNLENRIIDSDERAVYQEALQNIIQDKREDDLPEGVL SVPLLRHQKMALAWMVSKENSSHCAGGILADDQGLGKTVSTIALIQKQRIQQSKFMSV DSDRLKAEALNLDDDDEAAPVADNKGEQTKNDEPRKDLGAGSSSTAAGTGDVETCASL MNTAPDKTVERNVERKKKSKASTSSTMQSMTRPAAGTLVVCPASVLKQWANELTDKVG ESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIVANEVPKQNADDDTDQKNGEESSA GNKRKQPPKAQSKSKKKKKKLKDSDIYLASGPVARVRWFRVVLDEAQTIKNFRTQVAK ACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYSTYNSFCTMIKHPIARNAVHG YKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINLDKVDFTKEERAFYLTLEERSRQ QFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGHQSEYKGDGSIEMAKQLPKEM IINLLAKLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYERITTDENMCPSPNCGNTL STDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYISSKIQAAIDILNSIIN TYALTDSDTVESNPSRVAPVKAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSR DKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIG QTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLFRF </aaseq> |
| Gene Sequence |
<dnaseqindica>1149..1749#1856..2029#2712..2788#2883..2957#3044..4040#4591..4721#5261..5479#5979..6482#6589..6798#7283..7387#gcttctcggggcgcctcctccacctgtctcgcctccccctccccctccccctcccaggaaactccgtggcggcgacctcccccaccgccgccgccgccgccgccgcagccgcagcctccggcgccgcctcccaatccgggaggatccctccggacccgccgattccctcgccgccgcccgtgtcctcccgccgccgggatcgatctccgcggattcgacggcttcatcgaggtatcctcgtatgatggctcctccccccccccacgtagcggctcctttcgagggggttggttggttggttggttggttggtcgggggggtttgaggtttgaggccccgatgtttgtttgggcgtgccgtgtgggggaaggtgtgggagttttttttttcctcgcgtgtaatttttggcggtgttggatcgggttatgggggatagctgggaggttagcgaggtttggggtgtgtggttgggatgggagattggttgatcccgtcgattaggggtgtcccgcggcgagatttggtcccgttgcgcatttctgtttttctttttttgaaatgacctgattaattcaatccagttcgtagggtgtagctctctgtctggatcagattaggctttagtttatccatgtgtgattgcttcctagatttgaactggtcgggagtgtaccatgtgaatactgctttcgtatgaactgtgcggttactaacttccattcctaattaatatgactaatttttagggaagaaatgacttggtacctatgctagtatttttttcccctcatggataatgcttgataacgactttgagaagggcaaataaattcctaaaaaatgtttagcgttgctgttttttttttctttagtgttttctcacagttcaatatttactcatctacaccattatttgatccaccttgcaggttaagtcagcatagctaataactccgtctactgttgtgacctctgtggtttgctttgtgtgtttggcttcccaatcatctgcataaaccaggaagtgggtttgctttggaaatatttggggtcaaactagtagttggcacattgtgatctgatcatgtttatgcacagtttgtactgctaagcacaattggagttctgactatacagatgctgtgcgcatgcttgctggcaatatgaacaacgataactatattgacttgagttcagacagtgatatagattttgacttcgactcagatgattcagttggtggtttggaccaggagctagcttcatcttcttctaggcctactgaaaatataaatggtcaatatagaactctgccaccttcttttacaaatggtagacatgttgataacgctcgtcatgcgttaggttcaggtgacagagcttatccgcattcaagttcttatagggggtcaccaaatgattctgcaagggcaactcctgcttccaacagaactgatattgtagtcaagaagcacaatggttttgcatcggaagaaaatgataatggcaagaggattcttccctcatccttttcaaatggccgcacaacaaatgctatgcatccagtggttgcaagtgagacacgcaaattcccaccatcttttaccaatggaaattcacaaagattggctgaaaataggatgggaaaaaatgttgccaatggaattggggagccttcatcgtcaaggtttccgagccgaagttcttttggtactgacaacaagaaggtcatcacagacagtgacaatggtttgtatacctagtctcaaatgattgtaattcattcttacagttgcttgaaatctgtccaggttttctctgaaaaactaatgtttcccctttttgtgtttgccagaggatgtctatgtatatggaagctccagttcacatagggttcttcctccatcttttggtcgcaatagttctgctaatcacagcgaatttgctaatggcattgatatgcaaggtcgtctgaacctggaaaataggattatagattctgacgagagagcggtgtaccaggaagcactacaggcatgtgttcctttgttcctagttattgaggcaattttgtatgattgagttgtttttcttctacgttttctgaatcaaattggagagttgatttgatagataatataaacagttggcaccataatgtttttttcctagttcatcaataatcaaaaggatactcttgtgacgtgaagagaaccacagatagctagtttggtgttaagttgtttaaatttgcaaatttgtttagatttgctcattatcaatctcctgggttcctcagtttgctcctcaaattatttggttttctgacctttgaacatactatagctgccctcaatttttttgacctgttttgtccttgaaaaaatcatactatttattctccattcttcaagtagaaagatagaagttctttgaagatgattatacatacttctaattttacttcaaacctgtttcatattttgttttgatttttttttgttgaattatattgcaatcatgaaagttgtatttttgttttttgaatgaggcatataaatttctcatttgtatgtttatcttgtccatgacaagtttttatccagtctaggatacattttccaggtagaagttatgtactttagtgattgaggtatatgttggtctttattttgagtctgctttgtgatatttctttttatactatgttatacagaatattatccaggataaaagggaagatgatctgcctgagggtgttctgtcagtacctctgcttaggcaccaggtaaatatttctcacataatattaattatttattggcttactttatgattgatagtgtattccatgttcattacataccttttctttttgaaagaaaatggcattggcttggatggtttcgaaggagaatagctctcattgtgcaggtggaattcttgcagatgatcaggttacttctgatttcacaacttcttgacaaagatcaatttcttattgtgttaccatccttaaagtcgagcagttttcttttaacagggtcttggcaaaacagtgtctacaattgcccttatacagaaacagaggatccagcagtctaagtttatgtctgttgattcagatcgtttaaaagctgaagcgctaaaccttgatgatgacgatgaggcagcgcctgttgcggataataagggggagcagactaagaatgatgaacccaggaaggatctaggagctggttcgtcatcaacagcagctggtactggtgacgttgaaacatgtgctagcctaatgaatactgctccagataagacggttgaaagaaatgttgaacgtaagaagaagagtaaggcaagcacatcatctactatgcaatccatgacaaggcctgctgcaggtactctagtggtgtgcccagctagtgttcttaagcaatgggcgaacgaattgactgacaaggttggtgaaagtgctaaattgtctgttttggtctatcatggtggctcaaggaccaaagatccaaatgagttggcaaaatatgatgttgttatcactacatacacaattgtggccaatgaagtgcctaaacagaatgccgatgatgacactgatcagaagaatggtgaagaatcttctgctggtaataagagaaaacaaccacccaaagcacagagcaagtcgaagaaaaagaaaaagaaacttaaggattcagacatttaccttgccagtggcccagttgcaagagtgcgatggtttagggttgtccttgatgaagctcagacaataaagaactttcgaactcaagtggctaaagcctgttgtggattacgtgcaaaaagaagatggtgcttatcaggaacacctatacaaaatgcaattgatgagctctacagctatttccatttcttgaaatacgatccatattctacttataattcattttgtacaatgataaagcacccgattgctagaaatgcagttcatgggtataagaaacttcagactgtgttgaggatagttctcctgcgccgcacaaaaggtgataaaaactttttttattccatatgttttctgctgttccttttttgcctatatactagcttaggatatttcattgtaaggaagcaatttcaaccacaacacatagcattctttgttgctacagattacagaaacacgcttaacactctgcatgtggttaaacatctactagggtctgtatttgctattgtggtggctttgtattaaattgatatatgccatacaaacattaggtagacaggttcgatcaatttaccttaattgatgagcagatagtggaaagttatgatatttccttttttttcgtcaatataaaggacactgcattacaattgcttgccagttgccattttactacaagtcctcactcctcagctacttgtttctactcagtatgctatacctcctttctctttttcaaagaaatttgatatggttacattattgttgcaagatttttaatagcatattaatgctagtatgttactctagtttttcctttgattaaattatctgtcgttgatcacatgttaccttgttttatgtagaaactctgattgatggtgagccaatcataaagctacctccaaagacaattaatctggataaagtagattttacaaaagaggagcgagctttctatttgacgctggaagaacgctcgcggcaacagttcaaggttggttaaattttaaagtcaaacttttctgtggacggcctccgtatagtgtagatttgtgttgcatctggtattccgaattctagtcatgaaatgccattttggtcatgcatcgactaaactttcaaaactttgaaaatttatatttggattgtatacatgatagacacccatggagatttgtcatgtgaaggcacttctcataatatcataattttattgaggtttacaaatattataaaagttagtggtcaaatttgcatttttgaacaccacgtagatgtccaaaatgacattgatgtgaccaggagaagtgatgttaaatcttcaacattactgaatttccttttgtcctggaggctggagcaagtatgtgtagaatattgttgttatgatccaacaaagtttcctcatgcttccattgaaccattgtctcatatcaaatgttataaagtggatgttaatttgtgttcccttctgattactggagatttcacaagtgtagtttctgaatgctgatatattgtgatccatttcaggcatacgctgctgctggtacactcaaacagaactatgccaacattcttctaatgctgttgcgccttaggcaggcctgcgatcatcctcttcttgtgaaggggcatcagtcagagtataaaggcgatggttctatagaaatggcaaagcaacttcctaaagaaatgataataaatttgcttgcaaagctggaagttggagagttttgttctgtatgcagtgtaagcaatctaatctctctccattatgttgaatctgacctattctctctccattatgttgaaatgataatacacgtaatcaccagtattattgttgttattgtctggggctgtgtgtgtatgtataggcgcacaacctccatgcaacatatgaaaaattgtgtagtcagactgaaacataaatttgtcctacctatatcctctgttatttcgtgtccttggaataaaatcataatatgcattgtggaggggcagtggatgctaattaaatgataacaatgatagaatatctgataacctgaatcagcccaactgttcatatttaacgagaaaacaccttggggttattgcatccagagctacaatgccgcaatgccaagctgtcaggctatatgtttttgcaaatatccttgcccttcttgtttctatatctttggacaatctaattactggtgtaattcaatcttcttttgcaatctttggacttcttttacggcaggatgtacctgaggatgccgtcgtgacgatgtgtggccatgtcttctgctatcaatgtatatacgagcggataactactgatgagaatatgtgtccctcccctaattgtggaaacacattaagtaccgattcagtattttcgtcaggagcgttaaggatttgcatgtctggtgtatccagttctcatgcatcagggagttcatcattagatgacgagtcatcttctattagtcaaactagttacatatcctcaaagatacaggcggcaatcgatatactgaattcgatcattaacacctatgcccttaccgacagtgataccgtcgaatcaaatcctagccgagtggccccagtgaaagccattgtgttctcccagtggactggcatgctggatttgctggagctttcattgaatagcaatctcatacagtacaggagactagatggaacaatgtccctcaattcaagagataaagcagtgaaagattttaacacagacccagaggtccctattttctgtttccactctcttttttactaccttgtttctcttattactttcagccattcattcagcagttattctgaaaggaatccttttgtatcctcaggtcagggttatgatcatgtcactgaaagcaggtaatcttggtctcaatatggttgctgcttgccatgtaattctccttgatctttggtggaatccttatgctgaggaccaggcaattgatagagcacacagaattggtcagactcgtcctgttactgtctcccgtttaaccattaaagatacggtggaagatcgcattttagctctgcaggtaatagcttgtctttcatttgcactgtgctttcataaacttgtctttttcctacttagataacaataacatacgcctcttttttttttttttttttttttgagggatgagttatactagtagcattgatattctcaaatcgtgtcagcgttcattcgatgcttgtacttgaatatgtcgtaggtgcttgaaattcaagcccagcttttcaaaactttaatgtgatggttggaaaatgaacagggcagctgatagtgcaagttgtaatattcttgttattgttattttagggggtgttagttgtgtaccgataactaaacaactttaccgaggttgatttaatactttttttttatcgatcatgggggttaagacaacaattttgattgcataatctcatgtagatatgaattatcttgacacaaccaacatccctgataatttgggggtatgctcgtccaatgatgtttccgcttctttacaggaggaaaagagagccatggttagctctgcttttggcgaagacaaatcgggtggccacgcgactcggctcaccgtggatgatctgaagtatctatttaggttttgattggaagcacccgtgatctctgcgatacaatgacattgtatagtagcctgtgatctttgcctagatgcaactccaacagctgtgtaccgctgctgagtattttggtgcgaggtactgcggatttgtgtccttccatggctcgcagcagctccagttttgtcatgctctgatttgctagacgaaatgtagtaggcttagtcgctagcctgtgttgaatatttgaccccagcttgtaggagaattctgccattgctccctgttttatcaagagatccatctggtggtgtatatatatgtgcc</dnaseqindica> |
| External Link(s) |
