Difference between revisions of "Os08g0205900"
(Created page with "{{JaponicaGene|
GeneName = Os08g0205900|
Description = Similar to Viroid RNA-binding protein (Fragment)|
Version = NM_001067772.1 GI:115475280 GeneID:4344928|
Length = 569...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0205900| | GeneName = Os08g0205900| | ||
Revision as of 20:46, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0205900 |
|---|---|
| Description |
Similar to Viroid RNA-binding protein (Fragment) |
| Version |
NM_001067772.1 GI:115475280 GeneID:4344928 |
| Length |
5690 bp |
| Definition |
Oryza sativa Japonica Group Os08g0205900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:6169110..6174799 |
| Sequence Coding Region |
6169321..6169395,6169498..6169613,6170003..6170081,6170178..6170268,6170353..6170431 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:6169110..6174799 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:6169110..6174799 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatttgccgcagtctcctccttctcagatctaatgcggcctccaaggcaagcaacatagtaaaacatgtagctgccactggatgtttgccaaaatattcctcagaggcaccagccagatatttcagctctgaaccgtctcttcaggtcgactcgacagaagaaaatgggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttgcatcctctggttattgacagatctgagggttcttacgtttatgatatcaatgggaagaagtacatagatgctcttgcaggattgtggtctacggcattgggtggtaatgagcctcgattgatcaaagctgcaactgatcaattgaacaaattacccttctaccactccttttggaaccgtactaccaaaccctcattggatcttgctaatgaaattctcagcatgttcactgcaagggaaatgggaaaaatattctttacaaatagtggttcagaagcaaatgattctcaggtaaagctagtttggtattataacaatgcattgggaagacctaacaagaagaaatttatcgcacgctcaaaatcatatcatggatcaacattagtgtcagccagtctatcaggtcttcctgctcttcaccaaaagtttgatctgccagctccttttgttctgcacacagattgccctcactactggcgcttccatcttcctgatgagacagaagaagaatttgcaactagacttgccaccaacctggagaatcttattctcaaagaaggaccagaaacaattgctgctttcattgctgaacctgtgatgggtgctggcggtgttatccctcctccaaagacatactttgagaagattcaagcagtcctcaagaagtatgacatcttattaatagcagatgaggtcattacagcatttggtagattgggaaccatgtttggatgtgatatgtatgacattaaaccagatcttgtctcaatagccaaggctctatcttctgcctacatgccaattggagctattcttgttagtccggaaataacagatgtaatttattcacagagcaacaagctcggttcttttgctcatggatttacatactcggggcatccagtttcctgtgctgtcgccatagaagcattgaagatttataaagaaaggaatatcatcgaacatgttcagaaaattgccccaaggttccaggagggaatcaaggccttctctggaagtccaattgtaggcgagatacgtggtttaggactgatacttgggactgaatttgtcgacaacaagtctccgaatgatccattccctgctgaatggggtgttggttcattgtttggtgccgagtgtgagaagcgcggaatgcttatcagggttgctggggataacattatgctttcgccaccgcttataatgactcctgatgaagttgaagaaattatttgcaaatatggtgatgccctgaaggccacagaggaaaggattgcagagctcaaagccaagaggggttag</cdnaseq> |
| Protein Sequence |
<aaseq>MICRSLLLLRSNAASKASNIVKHVAATGCLPKYSSEAPARYFSS EPSLQVDSTEENGFKGHGMLAPFTAGWQSTDLHPLVIDRSEGSYVYDINGKKYIDALA GLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRTTKPSLDLANEILSMFTAREMGKI FFTNSGSEANDSQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLVSASLSGLPALHQK FDLPAPFVLHTDCPHYWRFHLPDETEEEFATRLATNLENLILKEGPETIAAFIAEPVM GAGGVIPPPKTYFEKIQAVLKKYDILLIADEVITAFGRLGTMFGCDMYDIKPDLVSIA KALSSAYMPIGAILVSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIEALKIYKE RNIIEHVQKIAPRFQEGIKAFSGSPIVGEIRGLGLILGTEFVDNKSPNDPFPAEWGVG SLFGAECEKRGMLIRVAGDNIMLSPPLIMTPDEVEEIICKYGDALKATEERIAELKAK RG</aaseq> |
| Gene Sequence |
<dnaseqindica>5405..5479#5187..5302#4719..4797#4532..4622#4369..4447#4205..4292#3999..4082#3862..3909#3261..3335#3091..3167#2905..2993#2704..2742#2247..2320#1865..1957#1536..1633#1281..1353#1047..1131#819..940#99..146#acatccttttcatctcccacctcctcactcctcgtcagttcgtcacttgcttccaagaaccccgtgacaaggcgggaaggaatccgaatcgcagcgagatgatttgccgcagtctcctccttctcagatctaatgcggcctccaaggtgatgttgattaaattctgcatttcttggaggtttttactgcacctgcgtcactgcttgtaacaagaagtggaacggttttgatgtttccgtcttcttgttttttttgaatatttggaggtagtattgtatattttttgcactgtggaattgatttttgatccctataaaggctcaagaacaacagggtgttgctgttagtaagcactaagcagggttgggtgggtctgtttgattcgttttgcagccttagaaaggtgcagtcttttgttaatcgagaattggttaataattggagcagtcgtgtgtttgtgatttcatttattcttttttaatttgcctgctgcagatgttatgtttagtcagatttaagatgtttatgcttttttgagcaattatagagcaactctctaaaccctgctttcctgatcatttcgttgtgctgttatcagcaacttgccttcattctttgttttgtttaaaaaaaaaaccttgaatgtacagatttaagcagtaatggttttgctcaagattagagttttcttcaaaacagttgctctgagagtagctcgagtagtttgaagcgattttgaactcttaacattattctaaagtcagcatttcttacagctcatgtacctaaattctgcattcatctatttcctcacataggcaagcaacatagtaaaacatgtagctgccactggatgtttgccaaaatattcctcagaggcaccagccagatatttcagctctgaaccgtctcttcaggtcgactcgacagaagaaaatgggtatgttttatgtgcagaattatcacataattatgtgtatagacatatctagtctaaatttcttgttatctaccactgatgctgcaacattttttacctgtatcaggttcaaggggcatggcatgctggccccattcactgctggatggcagagcaccgatttgcatcctctggttattgacagatctgaggttctgcaatttggaattgtcttaaaatttttttccattgattctcagattatagcacaagatttagaacatgtagctttccatgttgacttctcttcataatgtggtggtttctagctttatcttatatcatattcaacgaattgcagggttcttacgtttatgatatcaatgggaagaagtacatagatgctcttgcaggattgtggtctacggcattgggtatgtgcaccagttcaagctgtattttcagatttttgtggtataccagagagttgttcctactttctagtaaaactcgtttcccgcatatgtagcaaatgtagtattgcatatatactaaactttgctattgtcctttgtatattgtcttgttttctttgcgtaattccctttgctttcaggtggtaatgagcctcgattgatcaaagctgcaactgatcaattgaacaaattacccttctaccactccttttggaaccgtactaccaaaccctcattggtaccttttttatctcactatctttacaggaatatagttaaaaccgtaggttgttgatgttatatttctaacagtgtgcttgttattttacttgataattcctagtttcaccatcttccaaataggaataaaatttgatgctacaattgattacatcacatttagtagttcccttgtttctgttaaaaattggtggtttctgaatcttgatgattatactgctaatttcaggatcttgctaatgaaattctcagcatgttcactgcaagggaaatgggaaaaatattctttacaaatagtggttcagaagcaaatgattctcaggtacaataattagtcaaaacaaataactatcattatttggagtttatactatacctgctctcattatgaacttttctgttcaagtttggttagtaaaaaattgcaaaaataaatgttgtgccacagaatataaaaacattgtggggttttatttactgaaaataaatagtgtatggtcccccagttgtgatattccacaaagtacaaaggtcagtcgtgatattcagaggattatggtggagtagaagtatggaagtattcagtattataacagtgttattctttacaggtaaagctagtttggtattataacaatgcattgggaagacctaacaagaagaaatttatcgcacgctcaaaatcgtacgattcattttactttacactttagccttttctcctaatgcaatagacgatttgttgatatgatttattttcatttatgattataattctcaattcattttgtcctgcatgtcagttgtatatttttacttgcagttctgtatataagtctttcacatgtcaataccagatgatggtgtcagtttatattatcatgctttttgtaatatttttgcgtcaaacttaacaacagatgaaatactctaagaattatttctaaatcaccgtccttgtatccaccagcattacctttcaatatcatttaagctccttaccttgattatttaagttctcgagccatttggatgttatacattcccagctattttatatttttacagatatcatggatcaacattagtgtcagccagtctatcagggtgagtaaatcatactccataacatcaatatttccttctgttagtccttaaatctatcaaataatattcatactagttacgaggtaattctataatcctaagtagatgctttcttctcttggtatatttagaataacttgctaattcctgcattgtttacagtcttcctgctcttcaccaaaagtttgatctgccagctccttttgttctgcacacagattgccctcactactggcgcttccatcttcctggtactcttgttgcagcatttttttaatttgtggggttgggggcttttattatcaccgcatgatattacactaatgaaatgattttactgtgatatagatgagacagaagaagaatttgcaactagacttgccaccaacctggagaatcttattctcaaagaaggaccagaaacagtgaggaatttttccttctgccatcagaaaataccatatcctatattttgttgaatatttctctgatgcatttcatatcctttttattttcagattgctgctttcattgctgaacctgtgatgggtgctggcggtgttatccctcctccaaagacatactttgagaaggtaaccagaatcacatgttagccccacagtccatacaaccttgatgcattttctgaattcaagaaacgtttattgcatgttgattgttgaacatattacatccatcatatcctcagttcagtttgtagtatttgccagatttttagctgactactgaagagaagttatttattctatgtccttaggattatattatttcaattaaacttggatgtaaaacagagaccttctgtgtttatcatttcccggtcagcccatgcactgttctgggaatgcataaaaaatgcattgatatttagatagaattttgttactataccgtctctaagatttcttacattttaaacaacttccaacacttacgtaaaaaacaagttgcaacaagaaggtagccctgattttcttttatgtagcttcattattattttcatggtgctgatgccaattatttgttctttccacataaaatatttagattattgtgctgcctctaataattttctgtgggtttgttctctaccaacagattcaagcagtcctcaagaagtatgacatcttattaatagcagatgaggtactcgaaagtttctctattagaaagaaagtctgaatggtagaatatttactttatgggaaaattagtacatcatcatccatttgtaggtcattacagcatttggtagattgggaaccatgtttggatgtgatatgtatgacattaaaccagatcttgtctcaatagccaaggtgagttcaggcttcaataacagcagagtgcttatctgataagacaagaactctcctctctcttttatttgtttgatgaaactgatagagattcgtttttctcatttcttttctcccatcaggctctatcttctgcctacatgccaattggagctattcttgttagtccggaaataacagatgtaatttattcacagagcaacaagctcggtaaagacaattccatgggatgaatttattttttgtgttgcttctgaattgacaagcaaaatcctgtttgttacaggttcttttgctcatggatttacatactcggggcatccagtttcctgtgctgtcgccatagaagcattgaagatttataagtaaaacacacttttcataataacacaaaatattaatattatgctgatgtgattgtctgatgaatccttcctaatttctattagagaaaggaatatcatcgaacatgttcagaaaattgccccaaggttccaggagggaatcaaggccttctctggaagtccaattgtaggcgaggtattatcatgtctaagtttcttgtaattttgtgagatttcaaagtcggatggatatttcttgttcaaacacataactgtctgctcctctacgcagatacgtggtttaggactgatacttgggactgaatttgtcgacaacaagtctccgaatgatccattccctgctgaatggggtgtgtatctgccatatgattgaatgctttcatttttctgaagaatgtaccaagaatttaagtagaaaaaattagcccatctttagggtcgaatgcaaacaggggaattttattatttaccagtaccattattataggtaattattgtttttttcctccataggttttcaggtcggctagggactctgaaaactacaagttagcagtaatttacttctttgtctatagttgtttctgagtcacaaacaatgggatttaggacatggataacctattcttcagatttaagctcaatttataaatgcaaactttcctaaagatgcaaggatccttacaaaatggtttgcatgattgcagtaaactgatctcgttttggttgctaatcccaggtgttggttcattgtttggtgccgagtgtgagaagcgcggaatgcttatcagggttgctggggataacattatgctttcgccaccgcttataatgactcctgatgaagttgaagaagtaagatcacatatttacaatatatcatattttctatgtataatttccggtgtaactgattgaactaacttgaatctgtccaaatcctgtgttaatatctagattatttgcaaatatggtgatgccctgaaggccacagaggaaaggattgcagagctcaaagccaagaggggttagccattgccactgccgctgtcgttgttgtagtgattgatgatggtgatgacaaattgacaatgttcaatgtatacagagtggtttcatctgtagatgccaataatgaactgtaagcctgaagcttgttctagatgcgaacattgaaaatgatacaattgttatcttcaactgaatattggaatggggaatatggcaattgcttctctcaatc</dnaseqindica> 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| External Link(s) |
