Difference between revisions of "Os08g0260800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0260800| Description = Similar to Hv1LRR2| Version = NM_001067926.2 GI:297608289 GeneID:4345107| Length = 3609 bp| Definition = Oryza sati...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0260800|
 
GeneName = Os08g0260800|

Revision as of 20:47, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0260800

Description

Similar to Hv1LRR2

Version

NM_001067926.2 GI:297608289 GeneID:4345107

Length

3609 bp

Definition

Oryza sativa Japonica Group Os08g0260800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9793977..9797585

Sequence Coding Region

9793977..9794044,9794814..9795662,9795774..9796188,9796329..9797585

Expression

GEO Profiles:Os08g0260800

Genome Context

<gbrowseImage1> name=NC_008401:9793977..9797585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:9793977..9797585 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgaggccgtgattctttttgctgtgaggaagatcggtgttgcattgggaaatgaagcaaccagccaggctgtttcgtatttcaggaagtttgtcacgcagctaacagagcttcaaggcagcatgggccgcatcaggagggagctccggttgatgcatgagtttctctgtcgaatggatgtacgcaaccgtaataaccagacatatgaaatctgggtggaggagggacgagtacttgtacatgggatcgaagacattgtggacgaatatttgcatcttatcggtcagaagcttgacactggatggagcacctatctgaagaaaggaatcaagggacccaatgtcgtggtatccctgaacaggatagcttcattggttaaagaagccgaggtcaatctggtgcacctgtttcaggccaaggaccgatgggttttgcttccaagtgacagtaacgacaactcaagctacattgtcgagagatctcagcatttggcagccacttcatgttccatcagtgatgaagatcttgtggggattgatgattacaggagggatttggaaaagtggcttgaagatgatgaacctgcacaccttgtgatagccctgcttgggatgggagggcttggcaaaacagcccttgctgcaaatatctacaggagggcgaaggaaaagtttgaatgccatgcctgggtatccatctctcaaacatattcaagacaaggtgttttgagaaatttaattgggaagcttttcaaagatatagaggacgtaccaactgacattgccacgatggacatcacatcccttgaagagaaactgcatctttttctagtggagaagaaatacttgatcgtactagatgatgtttggagtacagaagcattcactgacttgtctaatgcacttgttcataacggcactggaagcaggcttgtaattacaacacgagacagtgaagtagccggccttgcttctaagaattatgtcgttgaactgaaaactttaccaagtgacaaggcaatggagttgttctgtaaaaaggccttccggagtgatacagatgacaaatgtcttgcaaagctaaatgatatttccgtggaaatcgtcagcaagtgcaaaggcttgcctcttgctattgtctctgttggtagtctcttgtttgtgcgtgagaaaaccacggaagaatggaaacggattaatgatcagctcagctgggagataatcaacaatccaaggctagatcatgtcaggaatggtgaaagcacactagaggaagtggcagaaggctacctaaaagagttggttcacaggaacatgctgcaactggtccaaaagaactcatttggtaggataagaagattcaaaatgcacgatatcgtgcgtgagctcgcggttgacttgtgtcggagagaatgttttggcattacatatgaggatggtcatcatgggagatcccttgaggaaaatgatgaacgtcgactggtaatacaaaaattccacgaggacgttggtcagtcggttttaggtgtgtaccggctccgctctatcattgtcctggataagagcactccatcatccattattttatcctctgtgttggacaactccaggtacatgtccgtgcttgagctaagtggagtacccatcaagacagttcccaatgctattgacatacggtgtctgccaagaaggatcgtcaagctgaagaagcttaggcacttatttgccgagaaactgcacgatgcaacctggagaaatttccgttgctgcactggtgtgcgcttccacaagggtctcggtaacctgacgagccttcggacgctacatgggctggaggcacaggaggagtccatcaggcatctcggagagctgaggcagctacgaagcctcagagtatggaacgtgaaaggagcctacagtggacgcctttgcacatctcttgttaagctacaattcctgtccaacctgtacattgtggcgagcaacgaaaacgaggctctccagctggaagagatgaacccgccgcctcccaaccttcagaggctgttcttgcgagggcggctagcagatgatatactgcaggaggagtctcccctcttccatcacgcagcaaggcgaaacctgtatgagctacggctgtattggtcccaattggaacaagaccctctgccatccctctccctgctgttgaatctgacagacctgaggctaaccaacacatacattggagagaggctggtgtttctttctgagtggtttcccaaccttaggatactcttcttaagagacatgcgtaatctgaaatggctggtggttcaaaaagacgccatgaagaaactgcaacggctaacactggttaacctcaaaaacatgagggacgtcccgttgggcattcagttcctcatgcccctgaaatatctaggctttctggaaatcaccaaggaattccttgagttattgcagtcctcttcgattaaagattttcggtggcagcattctcttcgagactctgagaccagttgcatcaagaccataactggtcgcgcttgcaaaaatcagactgcatttttgcatatggctccttga</cdnaseq>

Protein Sequence

<aaseq>MAEAVILFAVRKIGVALGNEATSQAVSYFRKFVTQLTELQGSMG RIRRELRLMHEFLCRMDVRNRNNQTYEIWVEEGRVLVHGIEDIVDEYLHLIGQKLDTG WSTYLKKGIKGPNVVVSLNRIASLVKEAEVNLVHLFQAKDRWVLLPSDSNDNSSYIVE RSQHLAATSCSISDEDLVGIDDYRRDLEKWLEDDEPAHLVIALLGMGGLGKTALAANI YRRAKEKFECHAWVSISQTYSRQGVLRNLIGKLFKDIEDVPTDIATMDITSLEEKLHL FLVEKKYLIVLDDVWSTEAFTDLSNALVHNGTGSRLVITTRDSEVAGLASKNYVVELK TLPSDKAMELFCKKAFRSDTDDKCLAKLNDISVEIVSKCKGLPLAIVSVGSLLFVREK TTEEWKRINDQLSWEIINNPRLDHVRNGESTLEEVAEGYLKELVHRNMLQLVQKNSFG RIRRFKMHDIVRELAVDLCRRECFGITYEDGHHGRSLEENDERRLVIQKFHEDVGQSV LGVYRLRSIIVLDKSTPSSIILSSVLDNSRYMSVLELSGVPIKTVPNAIDIRCLPRRI VKLKKLRHLFAEKLHDATWRNFRCCTGVRFHKGLGNLTSLRTLHGLEAQEESIRHLGE LRQLRSLRVWNVKGAYSGRLCTSLVKLQFLSNLYIVASNENEALQLEEMNPPPPNLQR LFLRGRLADDILQEESPLFHHAARRNLYELRLYWSQLEQDPLPSLSLLLNLTDLRLTN TYIGERLVFLSEWFPNLRILFLRDMRNLKWLVVQKDAMKKLQRLTLVNLKNMRDVPLG IQFLMPLKYLGFLEITKEFLELLQSSSIKDFRWQHSLRDSETSCIKTITGRACKNQTA FLHMAP</aaseq>

Gene Sequence

<dnaseqindica>3542..3609#1924..2772#1398..1812#1..1257#atggctgaggccgtgattctttttgctgtgaggaagatcggtgttgcattgggaaatgaagcaaccagccaggctgtttcgtatttcaggaagtttgtcacgcagctaacagagcttcaaggcagcatgggccgcatcaggagggagctccggttgatgcatgagtttctctgtcgaatggatgtacgcaaccgtaataaccagacatatgaaatctgggtggaggagggacgagtacttgtacatgggatcgaagacattgtggacgaatatttgcatcttatcggtcagaagcttgacactggatggagcacctatctgaagaaaggaatcaagggacccaatgtcgtggtatccctgaacaggatagcttcattggttaaagaagccgaggtcaatctggtgcacctgtttcaggccaaggaccgatgggttttgcttccaagtgacagtaacgacaactcaagctacattgtcgagagatctcagcatttggcagccacttcatgttccatcagtgatgaagatcttgtggggattgatgattacaggagggatttggaaaagtggcttgaagatgatgaacctgcacaccttgtgatagccctgcttgggatgggagggcttggcaaaacagcccttgctgcaaatatctacaggagggcgaaggaaaagtttgaatgccatgcctgggtatccatctctcaaacatattcaagacaaggtgttttgagaaatttaattgggaagcttttcaaagatatagaggacgtaccaactgacattgccacgatggacatcacatcccttgaagagaaactgcatctttttctagtggagaagaaatacttgatcgtactagatgatgtttggagtacagaagcattcactgacttgtctaatgcacttgttcataacggcactggaagcaggcttgtaattacaacacgagacagtgaagtagccggccttgcttctaagaattatgtcgttgaactgaaaactttaccaagtgacaaggcaatggagttgttctgtaaaaaggccttccggagtgatacagatgacaaatgtcttgcaaagctaaatgatatttccgtggaaatcgtcagcaagtgcaaaggcttgcctcttgctattgtctctgttggtagtctcttgtttgtgcgtgagaaaaccacggaagaatggaaacggattaatgatcagctcagctgggagataatcaacaatccaaggctagatcatgtcaggaatgtattactcttgagcttcatataccttccttcttacctgaaaagttgtttcctatactgcagtttgtttccagaggactatcctcttaaaagaaaggaacttgtacggctatggtggcagaaaggttcattgtggaaaagggtgaaagcacactagaggaagtggcagaaggctacctaaaagagttggttcacaggaacatgctgcaactggtccaaaagaactcatttggtaggataagaagattcaaaatgcacgatatcgtgcgtgagctcgcggttgacttgtgtcggagagaatgttttggcattacatatgaggatggtcatcatgggagatcccttgaggaaaatgatgaacgtcgactggtaatacaaaaattccacgaggacgttggtcagtcggttttaggtgtgtaccggctccgctctatcattgtcctggataagagcactccatcatccattattttatcctctgtgttggacaactccaggtacatgtccgtgcttgagctaagtggagtacccatcaagacagttcccaatgctattggtaatcttttcaatctgcaccatttgggtctgcgaggctcaaaggtgaagttcctcccatagtccatcgagaagttgtccaatctgctgacgctggacctttctggatcagacatacggtgtctgccaagaaggatcgtcaagctgaagaagcttaggcacttatttgccgagaaactgcacgatgcaacctggagaaatttccgttgctgcactggtgtgcgcttccacaagggtctcggtaacctgacgagccttcggacgctacatgggctggaggcacaggaggagtccatcaggcatctcggagagctgaggcagctacgaagcctcagagtatggaacgtgaaaggagcctacagtggacgcctttgcacatctcttgttaagctacaattcctgtccaacctgtacattgtggcgagcaacgaaaacgaggctctccagctggaagagatgaacccgccgcctcccaaccttcagaggctgttcttgcgagggcggctagcagatgatatactgcaggaggagtctcccctcttccatcacgcagcaaggcgaaacctgtatgagctacggctgtattggtcccaattggaacaagaccctctgccatccctctccctgctgttgaatctgacagacctgaggctaaccaacacatacattggagagaggctggtgtttctttctgagtggtttcccaaccttaggatactcttcttaagagacatgcgtaatctgaaatggctggtggttcaaaaagacgccatgaagaaactgcaacggctaacactggttaacctcaaaaacatgagggacgtcccgttgggcattcagttcctcatgcccctgaaatatctaggctttctggaaatcaccaaggaattccttgagttattgcagtcctcttcgattaaagattttcggtggcagcattctcttcgagactctgagaccagtgttgatatctagctatctgctggtccgacactcttactagacagtgtaagttcaacttgcagctacatactggtattcaagtagtaactcctaccccatcttaatcagcaaaccttttgcatcatgtcctattggcaggaaaatgttttcgacaaggacgggatatatggattattggagcatcatcgatccttttgcaccaaacaatgctcaattgaggcttgccgttttggtgtccgtttcatgaataaatgaatgtcaagtggtcctcgtaacctatttgtgctgtcaacattttatctgcttgtttccattcctgtttcagtactgactacggagtactaggcttttgtctactatactattaaggagttctttatattgtttgggacagggagtcctatgtttatgagatgttttcccaggttttattagttctatatatcccacgaaaattctatttgttgttctgttttcaaatagtcctattggtttgcaaaaaattatatggttatataattgttagccatttatttttaaagcttcataatatcttaaacttttattgtggcttcatatctgcattgatagttacatctctatttaaggtgaactattcgtttaagtttaggttcgaaattacagctaatatctacaatggtgaacaaaacattatactattttctttaatcaatgattaagtttctgggatgttaaagtcccttaaaaacttgatgtgcataaaaggcaacaaggtgtatttgtaggttgcatcaagaccataactggtcgcgcttgcaaaaatcagactgcatttttgcatatggctccttga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0260800, RefSeq:Os08g0260800