Difference between revisions of "Os08g0337700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0337700| Description = RabGAP/TBC domain containing protein| Version = NM_001068116.1 GI:115475969 GeneID:4345310| Length = 3343 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0337700|
 
GeneName = Os08g0337700|

Revision as of 20:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0337700

Description

RabGAP/TBC domain containing protein

Version

NM_001068116.1 GI:115475969 GeneID:4345310

Length

3343 bp

Definition

Oryza sativa Japonica Group Os08g0337700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15251662..15255004

Sequence Coding Region

15251984..15252115,15252381..15252482,15252589..15252666,15252770..15252863,15252983..15253161
,15253236..15253352,15253717..15254274

Expression

GEO Profiles:Os08g0337700

Genome Context

<gbrowseImage1> name=NC_008401:15251662..15255004 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15251662..15255004 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttggtacccaagtgaggggtgtggtggaagatgatttcaaccctaggaggaggaggacattgtggaacacgccagctgcatccatgcccactaccacccacaccatcaggtacagcacacccaggaagggccatgccaatgctcaccagctgttggccaaattcgaggacctctacggattcatggtggagggcaatgtcgacgacgtcaatgtgctgaacgatgtgagggagaggatgagggagcaagggagggtgtggtgggcgctcgaggccagcaagggcgcaaactggtatctccaaccaaggatctcctccaatggtggcagtgagggggtaatcagcgtcacgtcgctcaagctgtcggtgctcaccaacacgattacactaaggaggctgatcaggaagggtgtgccaccagtgctgaggccgaaggtgtggctgtcagtgtcgggggctgccaagaagcggtcaacggtgcctgagacgtactatgatgagttgatccgggctactgaggggaagaccacgccagccacgctacaaatcgaccatgatctccctcgcacatttccatgtcattcttggctgaacagtgaggaaggtcaggcatctcttcggcgtgtgcttgttggttactcatttcgtgactcagaagttggatattgccagggtttaaattatgtagctgcattgttgttgcttgttatgaagacagaggaagatgcattctggatgcttgctgtactactggaaaatgtacttgtcaatgattgctatactgataatctttctggatgccatgtcgagcagagagttttcaaagacctcctagctaaaaagtgccccaggattgctgctcatcttgaagcaatggggtttgatgtttctcttgttgccacagaatggttcttgtgcctcttctccaagaccttgccttcagagacaaccctccgggtatgggatgttctattcaatgaaggagcaaaagtattgttccatgttgctctggcaattttcaagatgagagaagatgatctactacgtattcaacatattggtgatgtaattgatattttgcagacaactgctcatcatctatacgaccctgatgaactcctcacgttcgcttttgataagattggttcgatgacaacaaacacaatcacaaaggaaaggaaaaagcaagagacggttgtaatggctgagcttgaccaaagaatcagacggttaagttcactcaagatggatggataa</cdnaseq>

Protein Sequence

<aaseq>MFGTQVRGVVEDDFNPRRRRTLWNTPAASMPTTTHTIRYSTPRK GHANAHQLLAKFEDLYGFMVEGNVDDVNVLNDVRERMREQGRVWWALEASKGANWYLQ PRISSNGGSEGVISVTSLKLSVLTNTITLRRLIRKGVPPVLRPKVWLSVSGAAKKRST VPETYYDELIRATEGKTTPATLQIDHDLPRTFPCHSWLNSEEGQASLRRVLVGYSFRD SEVGYCQGLNYVAALLLLVMKTEEDAFWMLAVLLENVLVNDCYTDNLSGCHVEQRVFK DLLAKKCPRIAAHLEAMGFDVSLVATEWFLCLFSKTLPSETTLRVWDVLFNEGAKVLF HVALAIFKMREDDLLRIQHIGDVIDILQTTAHHLYDPDELLTFAFDKIGSMTTNTITK ERKKQETVVMAELDQRIRRLSSLKMDG</aaseq>

Gene Sequence

<dnaseqindica>2890..3021#2523..2624#2339..2416#2142..2235#1844..2022#1653..1769#731..1288#gaaagccgtaggagaagctgccattggcaagaagctcatcaagaagagagctaatcccgaaaaaaaatctgagagagaggcacaggcgctgagcatttcatcatcttggtgataggaacggaagagctgctcccaatcttggtttgattcgatcagagccattggacctcccaaaatagggtcaaaagaggagaggagagaggagcagaagacgtgcagggcctgccatttttagccgctgctcgtgctcccaatctgaggctgccggtgcttgctttgcttccgcctcctcctcgggttcttgcagcttccgggatcaatcttcccacagaggcggcagcaccggccaaatacggtcgtcttcttgattcttggtgcaacgaatcagctcacccgaggaaagatccgtgcgggttcttgcaatccaaggtgagttggtgtttttccctctccaatccaatgagttcttgcacctaatttgttccttgtttgatgccaagtgcaataaatttcttcttcttgaaatggtcccaggggtcaaggattagagagtaataaatcagtggttacaatatccttggaggagtaatccatcataagctcttttttttttccaagaaaggttaggaagatagaaggaagaaaaccttcgaagcagcagagatttggggatttttagatcgatttttgtgaatattatttgttggcaagtagatttgtggataagaacatgtttggtacccaagtgaggggtgtggtggaagatgatttcaaccctaggaggaggaggacattgtggaacacgccagctgcatccatgcccactaccacccacaccatcaggtacagcacacccaggaagggccatgccaatgctcaccagctgttggccaaattcgaggacctctacggattcatggtggagggcaatgtcgacgacgtcaatgtgctgaacgatgtgagggagaggatgagggagcaagggagggtgtggtgggcgctcgaggccagcaagggcgcaaactggtatctccaaccaaggatctcctccaatggtggcagtgagggggtaatcagcgtcacgtcgctcaagctgtcggtgctcaccaacacgattacactaaggaggctgatcaggaagggtgtgccaccagtgctgaggccgaaggtgtggctgtcagtgtcgggggctgccaagaagcggtcaacggtgcctgagacgtactatgatgagttgatccgggctactgaggggaagaccacgccagccacgctacaaatcgaccatgtgagtactgtgaagctattacggatttatcctgtacaagtcagtatattatctatatttatctaaagtgaaagattatatggtcatctcagaatttcaagtttaatttaatgaataagcctgttaaattttttttatttatagttgttaaaaaaactgtatgacataggcaacaaatagagtgtatagttgtcgcattctagctaagtgtataattagtaatgagcatcattttacattcttcagttaacttcatcagtataatttttattttagtgaaaacaaatgtgtgattctactataattatcattttactaggactatggaatttagagaataatattagttatgggaattttacaggatctccctcgcacatttccatgtcattcttggctgaacagtgaggaaggtcaggcatctcttcggcgtgtgcttgttggttactcatttcgtgactcagaagttggatattgccaggtaggcataaagcaatgcttttcaaatgtaactgttttatagagaagctccattactaacaccatgcaatgcagggtttaaattatgtagctgcattgttgttgcttgttatgaagacagaggaagatgcattctggatgcttgctgtactactggaaaatgtacttgtcaatgattgctatactgataatctttctggatgccatgtcgagcagagagttttcaaagacctcctagctaaaaagtgccccaggtatttcccccctgttatgtttatggcttttatgctatgatttttcatcagtcgctggcaataacaagcattaccattataagatgattgtgaatcattggattacccaaatgatgcaggattgctgctcatcttgaagcaatggggtttgatgtttctcttgttgccacagaatggttcttgtgcctcttctccaagaccttgccttcagaggttagaagaaataccagatagcataaatatttaagaggtcaatgtatggtttactcaaacttatcttaaataattttcattattattatcactgttgtggcagacaaccctccgggtatgggatgttctattcaatgaaggagcaaaagtattgttccatgttgctctggcaattttcaaggtgtgtatcatgaaatttatcgatgcatgcattctgagagttgcctctatgagcaagagggtgcctgctgtttctttcgcttactctgtttttggtatatttgcagatgagagaagatgatctactacgtattcaacatattggtgatgtaattgatattttgcagacaactgctcatcatctatacgaccctgatgaactcctcacggtaaatcttcttcctagttttgggtccatcatatcgtatattatttttgttcatgtactggtaactcagtgaggtagtcagtggctttatattacgtagtcgcaatagttttacagatgaaaatttgggtcaatgggatatttcagtacaatgagaataaaaaccgtaaaagatgtctgtatggtttacccagatgtgttgatgttttgaagcactctaccaaacattggttgctgatggatcttttttatccttgtttttctagttcgcttttgataagattggttcgatgacaacaaacacaatcacaaaggaaaggaaaaagcaagagacggttgtaatggctgagcttgaccaaagaatcagacggttaagttcactcaagatggatggataatgtataagaaagggaaaaatgctctgcagtgttgtagcctttgtaggtttggaaacagtgaaatgggtagtcatttggtacttggcaccagttcagactgcggttcgatgagtgaaatcgtggaagaaccaagaatatgggggagttgcgaaaactgcaatgtgggtttctcatgaacaagtcatattgtgtgtttttgtgtgtgcatcacatcttcatatttgaaagagaattccatgatgccatatgagcagattgtgctaatggtggaaacttgtacaggtttggtgtttgttgaaattcatttggcaacccagcaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0337700, RefSeq:Os08g0337700