Difference between revisions of "Os08g0341700"

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(Created page with "{{JaponicaGene| GeneName = Os08g0341700| Description = Similar to Phosphatidylinositol transfer-like protein II| Version = NM_001068126.1 GI:115475989 GeneID:4345327| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0341700|
 
GeneName = Os08g0341700|

Revision as of 20:48, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0341700

Description

Similar to Phosphatidylinositol transfer-like protein II

Version

NM_001068126.1 GI:115475989 GeneID:4345327

Length

6897 bp

Definition

Oryza sativa Japonica Group Os08g0341700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15479577..15486473

Sequence Coding Region

15481681..15481687,15481792..15482110,15482269..15482368,15482638..15482904,15483027..15483104
,15483178..15483279,15483366..15483415,15483514..15483613,15484024..15484122
,15484270..15484383,15484485..15484659,15484973..15485379,15485812..15485886
,15485988..15486008

Expression

GEO Profiles:Os08g0341700

Genome Context

<gbrowseImage1> name=NC_008401:15479577..15486473 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15479577..15486473 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcagttcggcgccgatcagagagtatggagggcctgttctcgtttgacgagaggaaagatcgaaggtcagatgtggagaactcggaggacgagcggagaaggctatccattgggtcactcaagaagaaggcactgaatgcatcaaacaagctaacacattcactcaagaagagggggaagagaaaggtggagaatcggccctcattcacaatcgaagatgtcagggatgaagaagaggagcgtgctgtcttttccttccagcaggagctttttagcaggaacttgctgcctgacaagcataacgattaccacatgttgctgaggtttttgaaggctaggaaatttgacactgagaaagccattcaaatgtgggctgagatgctccagtggaggaaagaattcggcgcagacacaatactagaggacttcaattttgaagagctagacgaggtccttgtctattatcctcagggttaccatggagttgacaggcagggaagaccggtatacatagagagactaggaaaagttgaaccaaataaactgatgcacattactacagttgaccgctatatgaagtatcatgtacaagagtttgagagagcattccatgaaaagtttccagcatgctctattgcagcgaaaaggcatattgattctactacgaccatacttgatgtcgatggtgtgggtctcaagaacttcagcaaaacagccagggacatgctgggtagaatgcagaagattgacagtgactattatcctgagacactgcatcagatgtttgttgtgaatgctggtaatggtttcaaactactctggaatacagtgaaaggcttccttgatcccaaaactgcatcaaagatacatgttttgggaacaaaatttcatggaaaactccttgaagtgatagatgcaagccaacttcctgaatttttgggtggagcatgcacttgtgctgctgagggaggatgcctcaagtctaacaaaggcccatggaatgatcctaacattatgaagcttgcacataataaggaggcaaaatttactagacatactcggcgcttgtctgagattgagcaacgaaggggttcatttgctaggctacatcttttgaagggtagaagcagtgacacatcaacagtggagtcgggttcagatgttgatgatctcagttctccaatgatgagaaggccagtggaatgtagtcgattagctccagttcgtgaagaaatgcagatcagagcacgagactctgcagcttactacagctgcgatgatcactttgttgtggtagacaaaactgttgactatggtagaggaggagcgatgcctgataaaactagtgccccagaagtaagagctcaagctcggccttttggaggtagcacaacatcatatgcaacgggttcctcaagcaacagaggcggtatttcctcgagcaacagaagccgaacagtcgtacctaaagagaacacggatgaaggatttttccgccgtttcttcagattactgctggccttgattataaaagtttttgccttcttccacatagcatatggtcagcaggagatgcgggttgacaatccattgcctccagctgagcctgaaccaacttctgatgatcatccagcagtggagactttcagtgtagaccgcatcagtcctgtcatcgagcggcttcagaggctcgagggtaaggtcgatgagcttggcaacaagccaccagagattcccttggagaaagagcgctccctcttggaatcttgggataggataaaatgtatcgaatctgatctcgaacgcacaaagaaggtgctgcaagctaccgtgatgaagcaactggaaattgcagaatcaatagaggaagtgattaggaggcagctaaggagacgaagattttgtgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MSVRRRSESMEGLFSFDERKDRRSDVENSEDERRRLSIGSLKKK ALNASNKLTHSLKKRGKRKVENRPSFTIEDVRDEEEERAVFSFQQELFSRNLLPDKHN DYHMLLRFLKARKFDTEKAIQMWAEMLQWRKEFGADTILEDFNFEELDEVLVYYPQGY HGVDRQGRPVYIERLGKVEPNKLMHITTVDRYMKYHVQEFERAFHEKFPACSIAAKRH IDSTTTILDVDGVGLKNFSKTARDMLGRMQKIDSDYYPETLHQMFVVNAGNGFKLLWN TVKGFLDPKTASKIHVLGTKFHGKLLEVIDASQLPEFLGGACTCAAEGGCLKSNKGPW NDPNIMKLAHNKEAKFTRHTRRLSEIEQRRGSFARLHLLKGRSSDTSTVESGSDVDDL SSPMMRRPVECSRLAPVREEMQIRARDSAAYYSCDDHFVVVDKTVDYGRGGAMPDKTS APEVRAQARPFGGSTTSYATGSSSNRGGISSSNRSRTVVPKENTDEGFFRRFFRLLLA LIIKVFAFFHIAYGQQEMRVDNPLPPAEPEPTSDDHPAVETFSVDRISPVIERLQRLE GKVDELGNKPPEIPLEKERSLLESWDRIKCIESDLERTKKVLQATVMKQLEIAESIEE VIRRQLRRRRFCA</aaseq>

Gene Sequence

<dnaseqindica>2105..2111#2216..2534#2693..2792#3062..3328#3451..3528#3602..3703#3790..3839#3938..4037#4448..4546#4694..4807#4909..5083#5397..5803#6236..6310#6412..6432#gtggtggccaacaatagacaattggacaacctgtttcctcctcttcggctctcctcctcctcctcttgccttctcttcttcttgttcttgcccaatcctagtagaagcgcctaacttgtcgtttgctgtggcttgggttttgagagccggaggaggcaggattgatttttccatgattgggttttcttgattgattggcgcctgctgctgcggtgcggttggtccaagaaccgggatttcccggcgcggaatccggtcatccaagaggtgagatgatctttctttccttgccctgcttctctcgcggttctttaggcgttcttggcgtttctgttcttcaattattattattactatttgttaattttgaagaagtggagcgggattgttcgcctgttcgttgcttttggcgagtgtagaatcctgaaaattttaatgaggtggatgtgagagtctgttctgttggtggtgatttttgtcccggccgtgaagaacaaccgctgctctactgggtggttcttgatttggttttggtccgttctgccagtgttgcttgttctttctcaactgcgaggtgtgagcatggcgttaaattccatcttttagtgtttatcctctaaatttctgaatttttgggggcggttggatggttacactccatcccgtatttgagggcaaagacaacttctatgttaaattctgttttgtttctctgtcaattggtcagtcagtataaatttggcccgttcttcacgccagtgaggcgaaaattgttcaatcggttcaatcttcagagaatttctttatggaaaaatcacaacttccgattagtggatcaagtctctttctttgcggtttttcccctgcaaatttttatgtcaagttttgaggcggtagcagcagcagtcgttttcagcatagaaatatgcacattggaggtatcgaatattgtttaatttgtttggtagttttgctgaggatattcacccaagaacatagtcttcccggtcagaaaaaataatctgatatattagtggcagtcctcttctgaagtcatctcagctgaaatctagcctgtttttcttgcgggtattttgtcgctggagttttaatttagaagtttaaattaaagttaaggttgtttatatatatacgcttattgctcctcaccaattagtacagtgaattaacaagccttaatttctttattaatctgatatacattgggggtgaactgctaaactctggtcaaaggctgcttgcctgaccacacacttctttttttctgcaacttgtgacaggtcaagtagtgcatgttacacggtttcttccgagtggtgcaagaactagaccttgtttaggcttaacgtctgatttgtttttttttaacttagaaattaagctacactaaaatacctagtagtagcatgtttttggttttggtcggttgcacattgtggtgagacaggaagtgcataacacttttccattattagaaaaagattaggttgtttttggatgatttccttgattttgggggtgctaaatagtagtagtgctgtttgattacatttcgtcaaaattacttttttgacctgccttttgctgtgccatggccgatagccgtgcagggtttgtctgggctttatcagtgcacatatttttatggttctttaatctgtggttactctctgctagtggtttattacccagctgtaatcacctgttcatagcgtggagcgttttgttaatgcctatttaatggagtgattcattttactttcctgccatgtcttggtaactgcaagccagatgtagtagtatattaaaagtttcccctcctagttttgctggggaccaagaacattgtccagcttgtctaaataccaaaagaagtcttcccttgcaaagagagtggaagtgtgttttgcactctgaaagtctagctggcatattctcatgatacttttctcaatttctactccattccaggtgcatctgaatagataagaagagaacataatctttgggcattctctgtggttgatctctgaaaaaggtatcaaacagcctgcaaattaggtctcctgctctttccatcaaaatgtcaggtatcattttttttcttatcttatttatatatttgtgatgggttgctgatgaaatggttgctcattagtttactaatgggtgctattgtgctttgtgtgtaaagttcggcgccgatcagagagtatggagggcctgttctcgtttgacgagaggaaagatcgaaggtcagatgtggagaactcggaggacgagcggagaaggctatccattgggtcactcaagaagaaggcactgaatgcatcaaacaagctaacacattcactcaagaagagggggaagagaaaggtggagaatcggccctcattcacaatcgaagatgtcagggatgaagaagaggagcgtgctgtcttttccttccagcaggagctttttagcaggaacttgctgcctgacaagcataacgattaccacatgttgctgaggttggtgttggaacaatgctgaaagattgagagctactgaagcatgcagttgtttgtttctttctttcttcctttctttttttcttttgtgctgaagctctttctagttttatttgcaatatgtgtctaaaagttgtatgccttcattatctctataggtttttgaaggctaggaaatttgacactgagaaagccattcaaatgtgggctgagatgctccagtggaggaaagaattcggcgcagacacaatactagaggtgaggctaaacggctaatgctgctattaattgatacataaaaattgaaaatttaacttcgccagatacttcctgaaggatattcaaatatgttggtccatgtacacattgttttgtttacataaataggagattccatctggcatcttaaactaggagtgctttaaggtatagactatagagtgatgagtagtagtacgtattttatccccaagctcaaatcggtttattttgaaaggataactgatgtctacaaataaatattgcaggacttcaattttgaagagctagacgaggtccttgtctattatcctcagggttaccatggagttgacaggcagggaagaccggtatacatagagagactaggaaaagttgaaccaaataaactgatgcacattactacagttgaccgctatatgaagtatcatgtacaagagtttgagagagcattccatgaaaagtttccagcatgctctattgcagcgaaaaggcatattgattctactacgaccatacttgatgtcgatggtgtggtatgctgattcttctcatatctgaaatcacatttgtttgtgctgcaaattctcacgaattattttattacaaactgtaatcctaataatgttcctactattcattgccaattctgttgcagggtctcaagaacttcagcaaaacagccagggacatgctgggtagaatgcagaagattgacagtgactattatcctgaggtatgctacttttgttaatttccttgatcaatccaaggactaagtttggtttacactttacctgtatactcagacactgcatcagatgtttgttgtgaatgctggtaatggtttcaaactactctggaatacagtgaaaggcttccttgatcccaaaactgcatcaaagatacatgtgagtatgaatcctccctggagatattccttttcctgctcttgtccaaataaatatactatattttaatggagcttcgtttataggttttgggaacaaaatttcatggaaaactccttgaagtgatagatgcaaggtaagctttccattcagaaacattttatatggtttcttgatcataatgattttgtcgtcatgtctttgatttaatgcacattgttttgctatttacagccaacttcctgaatttttgggtggagcatgcacttgtgctgctgagggaggatgcctcaagtctaacaaaggcccatggaatgatcctaacattatgaaggtaatttttgttgatttatttcctaaaaatatatgtgcttcttcttagtaaggtttaatagtggttcaaaatttggattatttttgttgcttttgaattgtgacaagtgacaatatgataatgcctagttgatttagattacttaacttactacataaaaaccccaatatctttgttctcggcatgcttaaattataaatagaacatgttatataatcaatcattcaggattctctctctctctctctctctctctctctctctctctctctctctcttctgaagaaagcacacagatctccttatctagttcaaacaatattttcaaaagaatattttttttccatacatgttatactgaagtttatagcagcatcctcaaccgtggtaattttggtggttgcttgcagcttgcacataataaggaggcaaaatttactagacatactcggcgcttgtctgagattgagcaacgaaggggttcatttgctaggctacatcttttgaaggtaaagtccactttttatgtctgaagtctgaacaacttatattgttatgttgaatattctaaaacatgaatgaaggcattgtgctctcccatgaaccagttcacattgacaattaatagcgttttttttttcatgtactcatgacagggtagaagcagtgacacatcaacagtggagtcgggttcagatgttgatgatctcagttctccaatgatgagaaggccagtggaatgtagtcgattagctccagttcgtgaagaagtaagcttttcccttattcagttgtagcatgaacttgtttattcatgtgcccatgcaaattattttcttagtgtttacgaaatctcttatattctacacagatgcagatcagagcacgagactctgcagcttactacagctgcgatgatcactttgttgtggtagacaaaactgttgactatggtagaggaggagcgatgcctgataaaactagtgccccagaagtaagagctcaagctcggccttttggaggtagcacaacatcatatgcaacgggtatgtttatttatagtcttcatatgtcattttatgtaattcagcaaatctgttttttttttattctccccttacaagattctattcacctttgtaattcttatggataagctttcccttgtgaatattatgtctgtgttaagcaaggacagcattatacttatccctatgcattaatgtttcttgaaacatccctatgcattaatgaaagaacaagctattgaacttactattcttagaccttagttcttccttagaaccattcttaactatttgcttcgagtagtctgttcagtgttttttgtttgtataggttcctcaagcaacagaggcggtatttcctcgagcaacagaagccgaacagtcgtacctaaagagaacacggatgaaggatttttccgccgtttcttcagattactgctggccttgattataaaagtttttgccttcttccacatagcatatggtcagcaggagatgcgggttgacaatccattgcctccagctgagcctgaaccaacttctgatgatcatccagcagtggagactttcagtgtagaccgcatcagtcctgtcatcgagcggcttcagaggctcgagggtaaggtcgatgagcttggcaacaagccaccagagattcccttggagaaagagcgctccctcttggaatcttgggataggataaaatgtatcgaatctgatctcgaacgcacaaagaaggtaagatgatcacattattttctgtctgagtcttatctctattttcaaaatccagaaactatttcatagtatatgaatatgaataactctttatcgtgcctaaatatttactgtcaatagcatagaatttagattattaaactcagtaccaaactacaaactgaatactattattttaagtgtttcaaaagaggcaagcccactggtaagatagatagaaaatatatgcacggcaccttgaattttatctctttttacaaaaatcaaggtaggtcagaatcttcttatagtcttctatattacggtgcttgtgaaaattgtcatagcctcctgataaaaaaaaaatgtcataaccttctaccgaactaccatttaaatcttgaggcccatctcaagtgtaaatatgaaacctttcctccttacatttatcaggtgctgcaagctaccgtgatgaagcaactggaaattgcagaatcaatagaggaagtgattaggaggcagctaagggtaaaattggtcgctccttctgtttcatcttctaacatggattggcgtatcatatgcatattccatctcactgttttcctgcattgactctccttacacagagacgaagattttgtgcgtaataaagagacctaactccagaattaacaacacatgtcattgagaaataagactcaggagtacatttggcggcaaaattatgcataggacatggttgatgagtgcagacacttggattcggtgtttggattggctcaaagaatgggtggcaggagcccagaaacagcaaaatatcagctccccttctgaatctaagaggcttgtctatccttgatgttagcataggatgttaggatggatggcaaaaagaaatgtagaataggtaaaaatgggaatggatgtgaaacatatgtcattgtctgcatctagaaacataagcatcgagttctctttgccaaacaaattttctttatgtgatcctgtggtatggcaaaattgtaagggaaattgtaagaattatggaaagtgccttgcatcaggaattgagaggcaaagagaaatgtaatcatcaaaatgattacattgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0341700, RefSeq:Os08g0341700