Difference between revisions of "Os08g0389700"

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(Created page with "{{JaponicaGene| GeneName = Os08g0389700| Description = Protein of unknown function DUF81 family protein| Version = NM_001068254.1 GI:115476245 GeneID:4345471| Length = 535...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0389700|
 
GeneName = Os08g0389700|

Revision as of 20:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0389700

Description

Protein of unknown function DUF81 family protein

Version

NM_001068254.1 GI:115476245 GeneID:4345471

Length

5357 bp

Definition

Oryza sativa Japonica Group Os08g0389700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18540705..18546061

Sequence Coding Region

18541057..18541242,18542141..18542300,18543433..18543633,18543721..18543785,18543944..18543971
,18544045..18544121,18544212..18544298,18544451..18544501,18544851..18545072
,18545234..18545327,18545406..18545546,18545638..18545723

Expression

GEO Profiles:Os08g0389700

Genome Context

<gbrowseImage1> name=NC_008401:18540705..18546061 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18540705..18546061 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaggagatggcacgccctcgccgccgtcggcgtggccgcctgcgcggccgccgcagtcgccgccggcgacagggggttcacgttcgccgacgcggtggcggcgccggaggaggtgggctacatgaggaaagtcgtcaactttctgtggagcggcgaggcctcttatcaccacgtgtggccgccgatggaatttggttggaaaattgttttgggaatattaattggattctttggagcagcgtttggaagtgtaggaggagtaggtggcggtgggattttcgtgccgatgctgaccttgatcattggtttcgacgcgaaatcatcaacggcgatatcaaaatgtatgataatgggggcagctgtgtcaactgtctactacaacctcaagctgaagcacccaactttggatatgcctgttattgactatgatctagccctgcttatccagccgatgctcatgctagggatcagcatcggtgttcttttcaatgtcatattccctgattggctcatcacagttctattgatcatccttttcctaggcacttcaactaaagcttttctgaagggtgttgagacgtggaagaaagagacaatactcaaaagggaggcagcaaagcggttggagcaaatagctgaagaaccggagtatagtccgctgcccacagggccgaatgccacagctgagtcaaaagccccatcagatgaagcagcatctctatggcaaaatgtttactggaaggagtttggacttcttgcctttgtttggatagcattccttgtgcttcaggtcactaagaattacatgcctacttgctccacgtggtactgggttttgaactttctccagatcccggtgtcagttggggtgaccatgtacgaaggattgggcttgatgcaggggaggagggtcatatcatcaaaaggagatgaacaaaccaatctaaaatttcaccagcttctggtgtactgcttttttggaatgatggctggtgttgttggcggcttgcttggtcttggtggcggcttcatcatggggcctctgttcttggagcttggaatccctccacaggtctcaagtgccacagccacctttgcaatgatgttctcatcttccatgtctgttgttgaatactacctcttggaccggttccctgtgccatatgctcttttcttcaccgttgtggccttttttgcggcgattattggacagcacattgtaaggaagctgatcaattggttagggcgggcatcactcattatcttcattctgtccttcatgatcttcatcagcgcaatctcactaggtggagtcggcatctccaacatgattggcaagattgcgcgacacgagtacatgggtttcgacaacatctgcaattatgatgtataa</cdnaseq>

Protein Sequence

<aaseq>MGRRWHALAAVGVAACAAAAVAAGDRGFTFADAVAAPEEVGYMR KVVNFLWSGEASYHHVWPPMEFGWKIVLGILIGFFGAAFGSVGGVGGGGIFVPMLTLI IGFDAKSSTAISKCMIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISI GVLFNVIFPDWLITVLLIILFLGTSTKAFLKGVETWKKETILKREAAKRLEQIAEEPE YSPLPTGPNATAESKAPSDEAASLWQNVYWKEFGLLAFVWIAFLVLQVTKNYMPTCST WYWVLNFLQIPVSVGVTMYEGLGLMQGRRVISSKGDEQTNLKFHQLLVYCFFGMMAGV VGGLLGLGGGFIMGPLFLELGIPPQVSSATATFAMMFSSSMSVVEYYLLDRFPVPYAL FFTVVAFFAAIIGQHIVRKLINWLGRASLIIFILSFMIFISAISLGGVGISNMIGKIA RHEYMGFDNICNYDV</aaseq>

Gene Sequence

<dnaseqindica>353..538#1437..1596#2729..2929#3017..3081#3240..3267#3341..3417#3508..3594#3747..3797#4147..4368#4530..4623#4702..4842#4934..5019#ttggcagttgccacaaggatatcgtcgcttccgcttctctccctctctcgccccgctctacctccatcctcttcctcctcgcattccttgccaacctcgccgccccggcctccgacgatcgccggccgccgcctccacagtttccatcgaacgccagggttggtttccaagaactcttcgcgctatctatctatctatctatctttgtaagttcattgcgaggcacagatcaaagaagcaaactcgctgccttatttctctgaggcctggaagagctcaaagatttaattgcactttccttctttaattggatttcgcatgcagggggggctaaattaaagaaggatacaaaatggggaggagatggcacgccctcgccgccgtcggcgtggccgcctgcgcggccgccgcagtcgccgccggcgacagggggttcacgttcgccgacgcggtggcggcgccggaggaggtgggctacatgaggaaagtcgtcaactttctgtggagcggcgaggcctcttatcaccacgtgtggccggtaatactactactactacaaagcacactctcttctgtttctgacaattaattaatcttggagctgtatttttttttgtccttttttcccgtgttggaacatgttttttttttatgtatatatttttagtaagtatcttgtttttttttttagttttgtcatttttggtgcaatcatctaaaaaaagagtttaagagttctggtggtgctgatgtagtattttgtttgattcacggtttaaaactacgaaaatctttacctttctctttctttactactggctttatataggattctcagttattatcggtttatcctaaaatttggtcaaaaacatgtctaactgaatggagtgttcctaccttgagttttttcaggggaataaatttgctggcttaattgctaaagactgcagttttgttttgtggaagaacactgcacttatctttcgtgatgaccctgtcaatagtagttcatatactgctctccattttttataacatgttgattttttacagcatatttataggctgtcgattttttgtaggatatttcgaacatcttttatactccctctgttttatattataagtcatttgacttttttatagtcaaacttctttaaatttgaccaagtttatagaaaagcatagcagttttttaaacacaaaccaaacatactataaaaatatattcattattaaatttaatgaaactgattttatattttagatgttgctaaatttttttataaatttagtcaaatttcacaaagtttgactagaaaaaaaatcaaacgacttataatatgaaacaaagggagtatatatatacctctcgtttttgtgtcaatatgccgttaatttgttgatttaaatgaatcactttgtttttgcagccgatggaatttggttggaaaattgttttgggaatattaattggattctttggagcagcgtttggaagtgtaggaggagtaggtggcggtgggattttcgtgccgatgctgaccttgatcattggtttcgacgcgaaatcatcaacggcgatatcaaaatgtgagggtttagttcgtttaacagcatttcatctgttcttgcatggattatctgaaagaaggaacctattatgtttgtcctttgcagtcattgtcagcactcagcagtgcaatcaatatcatccttattggtaccattgaaccgtgcctttcaaaataaaagataagtactgttgcttcagaaagaaaaaaaaaaagataactgaagctttgaaaaaacgagaaccttgtgttcatgtttacaatgaacccataatgattagtactacctccgttttttaatagatgacgccgttaactttttctcacatgtttgatcattcgtcttattcaaaaattttatacaaatgtataagatataaatcacacttaaagtactatgagtgataaaacaactcataaaataataaattataattacataaattttttgaataatacgaatggtcaaacatgtaagaaaaagtcaacggcgtcgtctattaaaaaacagaggtagtattgtttaccgtggtggaccgataatgattattgtttctacactatacagaagatcagcttagtctgtccgacccatgcattacgaatcatgtttctatttcatttttagtgaattctataattttctttgacccacttccacataatttggttttgagacttgtctaacagtcatcaattgaaccatacatatgacattcacaaaaaggggaaaaaaggaagcaaagaaccgtacataacttggaatattcaccaaattgctggtgatctattttttagaatactggtctacatctgaaaatggatgtttagaactttaagtgtttgagaatagtcaaatatcacttcaagagattgttgtgcaatgttactgcactgtttctaaaactgtactgtaaagtgagtgcagtactgtactttatacttattcacataaaccatttttacaatttgtaatgcaacaggagataaatccaatgcaaactttataagagcataacaattatgaaactcttagcatctaacatttcaaaaaataatgacacagggaaagtagaaaacagtgacagatatatgcgcgaaacgtttgttaggttcatgatctgattaagccattataaactttggaacaggtatgataatgggggcagctgtgtcaactgtctactacaacctcaagctgaagcacccaactttggatatgcctgttattgactatgatctagccctgcttatccagccgatgctcatgctagggatcagcatcggtgttcttttcaatgtcatattccctgattggctcatcacagttctattgatcatccttttcctaggtgctcccttgtgtcctgaaacagcaaaaaatggcttaacctattgccttctgttgacttcagtttaaatttccaattaaattgtaggcacttcaactaaagcttttctgaagggtgttgagacgtggaagaaagagacaatactcaaaagggtaatatttccttccccttgcaatcttgcatctatcagctttcaaccaacattccagatttcaagcttgacaatcaaagcatcattaatattcctttccttcattaatatactactaatctgccaatattgatcttcttgtggtcccactcattttaggaggcagcaaagcggttggagcaaataggtgagtatgaaacaaaattactcaattttcatgaaatgtagatattgttgctcatatagtctttatgtatcagctgaagaaccggagtatagtccgctgcccacagggccgaatgccacagctgagtcaaaagccccatcagatgaagcagtaagaaaaaaaattgtgatctttatattccctggcattggttagctatcatttgaaggacttaagaatataacttacctgatactgcaggcatctctatggcaaaatgtttactggaaggagtttggacttcttgcctttgtttggatagcattccttgtgcttcaggtcactaaggtgtgcgcctcaacttaacatgaatgccaggagtttttttcttttttgcaactataatgcgaagagagatattgcattccaagaaacaaaaatactgtagcattgacagtaacatccagtcaaccatcttatattatttttcttttttgcagaattacatgcctacttgctccacgtggtactgggttttgaactttctccaggtattgtactgtcttacctcgaatttgaataatagattcatagcttaggtagttttatgcaaatgttgtacagaatagaagatatgtatcacttgatatttaagaggcttttcatgccatcaggctgttaactacctggacacatcatcacttattgctataaattaactaatttttttgcagaggttgtaatgcatcatagtggtccattcttaattttttctcgaattggtcattgattagaactgcatatggcatccctgctagattgtacatctcatggcatgatcatatccaatataacctagctagttaactgttacagtgcatcttttcttgagaaatgcagatcccggtgtcagttggggtgaccatgtacgaaggattgggcttgatgcaggggaggagggtcatatcatcaaaaggagatgaacaaaccaatctaaaatttcaccagcttctggtgtactgcttttttggaatgatggctggtgttgttggcggcttgcttggtcttggtggcggcttcatcatggggcctctgttcttggagcttggaatccctccacaggtaacttttgggttttgaatcatgaatgcttttgttcatatgcatttctgaatcatgaatgctttttgttcatatacattatgcgcttctttcatacctgttgaattttgtcggattttgttgatgtttgtttttcgcctccataactgaaactatcacaggtctcaagtgccacagccacctttgcaatgatgttctcatcttccatgtctgttgttgaatactacctcttggaccggttccctgtgccatatggtactctctcttccctgcacacacctaaaacacaaatgatgccgtgcatttgacatttaatctttgaaccctttgcagctcttttcttcaccgttgtggccttttttgcggcgattattggacagcacattgtaaggaagctgatcaattggttagggcgggcatcactcattatcttcattctgtccttcatgatcttcatcagcgcaatctcactaggtaccatttcctcccccttactgcactgtaattagttcggaaaccatgactttaacacagtaccactgatgcaaccatttgtaatctttaggtggagtcggcatctccaacatgattggcaagattgcgcgacacgagtacatgggtttcgacaacatctgcaattatgatgtataaggctcaggctcacaagggaaatatatgtgcagttcagtgaatagaacattgtgatgtggatttttcagatgtcaaattgtagcaagtacagattgaagcataggggcatgccgatcaatttttttgcctgtaatttaagtaattattattgcccgacaactctggagaggcaaactccaaacataagcagtcgatattctctgaagagaatagcaagagcagatcatttattattctttttactggtttcgttgtcatcgttttatatttaaatgttgtaagaaaaagctaaacagatttggagctcagtgttactgttatttttttttccagtgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0389700, RefSeq:Os08g0389700