Difference between revisions of "Os08g0390200"

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(Created page with "{{JaponicaGene| GeneName = Os08g0390200| Description = Similar to 2-oxoglutarate-dependent oxygenase| Version = NM_001068258.1 GI:115476253 GeneID:4345475| Length = 1473 b...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0390200|
 
GeneName = Os08g0390200|

Revision as of 20:49, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0390200

Description

Similar to 2-oxoglutarate-dependent oxygenase

Version

NM_001068258.1 GI:115476253 GeneID:4345475

Length

1473 bp

Definition

Oryza sativa Japonica Group Os08g0390200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18579794..18581266

Sequence Coding Region

18580008..18581198

Expression

GEO Profiles:Os08g0390200

Genome Context

<gbrowseImage1> name=NC_008401:18579794..18581266 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:18579794..18581266 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccttctccggcaccgaccgcctccgcgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccctacttcttccgccaccaccccgacccactccccgtcgccgcgccgtcggaggccgccgcggccatccctctcatcgacctcgccaaggccgacgtcgaccgtggccacgtcgtctcccaggtgaggtccgccgccgagtcggccgggcttttccaggtggtgaaccacggcgtcgccggggagctcatggacgcgatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctactacaccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgccggcggcgcagtggcgcgacacgctgtacgtggagatggtgcccgacgcgccctcgccggaggagatcccgccgccgctcaggggcgtcgcggaggagttcgccgcggcggtgtggcggctcggcgagcgggtgaccgagctgctctcggaggcgctgggccttccccccgggtacctcgccgagcacgccgggtgcatggacggcatgagcatggtggcgcagtactacccgccgtgcccggagccggagaagacgatgggcacgacgcggcactccgacccgagcttcctcaccgtgctgctgcaggacgagtccggcgggctccaggcggtgctcccgcggcccccggaggagcggtgggtggacgtgcccccggtggccggcgcgctggtggtgaacgtcggcgacctcctccagctggtgtcgaacggccggctccggagcatggagcaccgggtgctgcccaccgccgccagcgcggcgcgggcccgcgtggcggtggcgtgcttcttccggctcgagtactcggcgtcgttgacgaggccgaggtcgtacggcccgatcgtggattccggcgaaggcggcgcgcggcgggcggcggcggtgtacaggagcacgacgccgagggatttcctggcgtacttcaacggcaaggggctcgacgggcggtcggcgctggagcatttcaggattccggaggcggctgcggcttcttccgccgtcgacgtcgtctcctcctccaccaccgccgccgcatccattccacggtag</cdnaseq>

Protein Sequence

<aaseq>MATFSGTDRLRDLHAFDDTKAGVKGLVDAGVTTVPYFFRHHPDP LPVAAPSEAAAAIPLIDLAKADVDRGHVVSQVRSAAESAGLFQVVNHGVAGELMDAML AAARRFNEQPAEAKAPYYTRDLGSKVRFFCNFDLFQSPAAQWRDTLYVEMVPDAPSPE EIPPPLRGVAEEFAAAVWRLGERVTELLSEALGLPPGYLAEHAGCMDGMSMVAQYYPP CPEPEKTMGTTRHSDPSFLTVLLQDESGGLQAVLPRPPEERWVDVPPVAGALVVNVGD LLQLVSNGRLRSMEHRVLPTAASAARARVAVACFFRLEYSASLTRPRSYGPIVDSGEG GARRAAAVYRSTTPRDFLAYFNGKGLDGRSALEHFRIPEAAAASSAVDVVSSSTTAAA SIPR</aaseq>

Gene Sequence

<dnaseqindica>69..1259#ccaccagcacggcggcagcactcaaacgttcattcaccgcacaacaccacactcgcggactcgcccatatggccaccttctccggcaccgaccgcctccgcgacctccacgccttcgacgacaccaaggccggcgtcaagggcctcgtcgacgccggcgtcaccaccgtcccctacttcttccgccaccaccccgacccactccccgtcgccgcgccgtcggaggccgccgcggccatccctctcatcgacctcgccaaggccgacgtcgaccgtggccacgtcgtctcccaggtgaggtccgccgccgagtcggccgggcttttccaggtggtgaaccacggcgtcgccggggagctcatggacgcgatgctcgcggcggcgcggcggttcaacgagcagcccgcggaggcgaaggcgccctactacaccagggacctcggcagcaaggtccggttcttctgcaacttcgacctgttccagtcgccggcggcgcagtggcgcgacacgctgtacgtggagatggtgcccgacgcgccctcgccggaggagatcccgccgccgctcaggggcgtcgcggaggagttcgccgcggcggtgtggcggctcggcgagcgggtgaccgagctgctctcggaggcgctgggccttccccccgggtacctcgccgagcacgccgggtgcatggacggcatgagcatggtggcgcagtactacccgccgtgcccggagccggagaagacgatgggcacgacgcggcactccgacccgagcttcctcaccgtgctgctgcaggacgagtccggcgggctccaggcggtgctcccgcggcccccggaggagcggtgggtggacgtgcccccggtggccggcgcgctggtggtgaacgtcggcgacctcctccagctggtgtcgaacggccggctccggagcatggagcaccgggtgctgcccaccgccgccagcgcggcgcgggcccgcgtggcggtggcgtgcttcttccggctcgagtactcggcgtcgttgacgaggccgaggtcgtacggcccgatcgtggattccggcgaaggcggcgcgcggcgggcggcggcggtgtacaggagcacgacgccgagggatttcctggcgtacttcaacggcaaggggctcgacgggcggtcggcgctggagcatttcaggattccggaggcggctgcggcttcttccgccgtcgacgtcgtctcctcctccaccaccgccgccgcatccattccacggtagcaatcgtgtcggtgcgtgttgaggttgttgcttgctggtagctagtgtgtgttatccggaagggtcgtagcagtgtacgcgtggcgatttgttggttgccagtcaggttaggccaggtgttacgtcactgattaatttgtatgatcgtactatggatggcatgtaaaacttggtgatttttgtactgtaataaatgtcgatcttgacgtggttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0390200, RefSeq:Os08g0390200