Difference between revisions of "Os08g0428400"

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(Created page with "{{JaponicaGene| GeneName = Os08g0428400| Description = ZIM domain containing protein| Version = NM_001068384.1 GI:115476505 GeneID:4345625| Length = 2826 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0428400|
 
GeneName = Os08g0428400|

Revision as of 20:50, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0428400

Description

ZIM domain containing protein

Version

NM_001068384.1 GI:115476505 GeneID:4345625

Length

2826 bp

Definition

Oryza sativa Japonica Group Os08g0428400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:20713121..20715946

Sequence Coding Region

20713566..20713770,20713874..20713931,20714054..20714411,20714500..20714584,20714699..20714973
,20715054..20715286,20715738..20715807

Expression

GEO Profiles:Os08g0428400

Genome Context

<gbrowseImage1> name=NC_008401:20713121..20715946 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:20713121..20715946 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggattttcttggcgcgatttggaggaaggaggaggcggccggcaagccggaggagcattcagattatcgaggaggaggaggaggcgcgtcggcggcgatgcagtggcagtttccggcgaccaaggtcggcgccgcgtcgtcggcgttcatgtccttcaggtcgtcggcggcggcggcgagggaggaggaccccaaggaggcggcggtgttcgaccgcttctccctctccgggttccgcccgccgccgcgcccgtcccccggtgacgccttcgacggcgctgccgccatgaagcagcggcagtttggattcaacggccggcagcagtacgccgccgcggcgcagcacggccaccgggagcagggcgtggactcctacggcgtcgcggcgccgcaccatttcccgtcgccgtcgccgtcgccgcgccaccccgtgccgttcggccacgcgaaccccatgctccgggttcatagcctccccaacgtcgccggcgggagcccctacaggaaccaatccttctccgtcggcaactcggtggccggctccaccgtcggcgtctacggcggcccaagggaccttcaaaatccgaaggtgacacagatgaccatattctacgatggattggtgaatgtgttcgacaacattccggtggagaaggctcaagaacttatgcttttggcaagcagggcatccattccgagtccaccgagtgcagctcgtaaatcagattcgcctatttccgctgctgcgaaacttacagtgcccgaggctttgcctgcaaggcagattgtagttcagaaaccagaggcttctgtgcctcttgtatcaggggtttcgaatccgatcaccatcgtgtcgcaagctgtgactctccccaagagcttttctagctccaacgactctgcggggccgaaatctggaggcctaccgttggctgttactcctttgagccaggcatccccgtcccagccgattccagtagcaaccacaaatgcttcggctatcatgccaagagctgtgcctcaagctcgaaaagcatctctcgcccgattcttggagaagcgaaaggaaagagtgtcaagtgttgcgccatacccatcctcaaagagtccactagagagcagtgacaccattggcagtcccagcacaccgagcaaatcatcgtgcacggacatcaccccttcgaccaacaactgcgaggactcactgtgcttaggtcagccaaggaacatcagcttcagcagccaggagccccccagcacaaagttacagatatga</cdnaseq>

Protein Sequence

<aaseq>MERDFLGAIWRKEEAAGKPEEHSDYRGGGGGASAAMQWQFPATK VGAASSAFMSFRSSAAAAREEDPKEAAVFDRFSLSGFRPPPRPSPGDAFDGAAAMKQR QFGFNGRQQYAAAAQHGHREQGVDSYGVAAPHHFPSPSPSPRHPVPFGHANPMLRVHS LPNVAGGSPYRNQSFSVGNSVAGSTVGVYGGPRDLQNPKVTQMTIFYDGLVNVFDNIP VEKAQELMLLASRASIPSPPSAARKSDSPISAAAKLTVPEALPARQIVVQKPEASVPL VSGVSNPITIVSQAVTLPKSFSSSNDSAGPKSGGLPLAVTPLSQASPSQPIPVATTNA SAIMPRAVPQARKASLARFLEKRKERVSSVAPYPSSKSPLESSDTIGSPSTPSKSSCT DITPSTNNCEDSLCLGQPRNISFSSQEPPSTKLQI</aaseq>

Gene Sequence

<dnaseqindica>2177..2381#2016..2073#1536..1893#1363..1447#974..1248#661..893#140..209#gagagagaggaaagcgaagcgaagcacagcagcgcgaagaaaggtcaaggcatcgtggagaagaaggagaggaagaggaagaggggataaaagttttgcttggattggttcttgttcttgaggcgttttttcgcgtgggatggagagggattttcttggcgcgatttggaggaaggaggaggcggccggcaagccggaggagcattcaggtcggtgctccactgttcttctttgatgatgaactcgtttggttggttggttggtgctagtagtagtagtagtagcggcttagctcgcggccatggcgatgcgggtttttaattgggtgggtgcgatgcgagctcggatttcgggcatgtgatgtgatccaccagagcagagatgaatgcgtgcagctgcggatttgggatggcatcgattggccgcccaattcgcagctttcctttttgtttttgtttagttataaaagaggctttcattttttttcaatttttttgacggctttaaattgcttgttcaaatcggcacgattttcttgtgcgtgatttagcgccttttttttcttcgattctgcgtaggtaaatctgtgctgcgattgttgtgttttttttggctgtgcgtcgtgatttgtgagtgaatttgtagtttctcgtgatgcagattatcgaggaggaggaggaggcgcgtcggcggcgatgcagtggcagtttccggcgaccaaggtcggcgccgcgtcgtcggcgttcatgtccttcaggtcgtcggcggcggcggcgagggaggaggaccccaaggaggcggcggtgttcgaccgcttctccctctccgggttccgcccgccgccgcgcccgtcccccggtgacgccttcgacggcgctgccgccatgaagcaggttcgcctcgcctccgacctccccgtcgcccacgtcgtgtccctcccatggtagattctaacggtctgagctgtgtgcagcggcagtttggattcaacggccggcagcagtacgccgccgcggcgcagcacggccaccgggagcagggcgtggactcctacggcgtcgcggcgccgcaccatttcccgtcgccgtcgccgtcgccgcgccaccccgtgccgttcggccacgcgaaccccatgctccgggttcatagcctccccaacgtcgccggcgggagcccctacaggaaccaatccttctccgtcggcaactcggtggccggctccaccgtcggcgtctacggcggcccaaggtggataatctctactctgctctaatagaaatcatttctgaattttgagtgcaaagctaagaaaaaaaaatgagaaagcattgagctgacaattggatcgttgacttgcaaaagggaccttcaaaatccgaaggtgacacagatgaccatattctacgatggattggtgaatgtgttcgacaacattccggtggagaaggtatcgtatctttgcgacgcgcgaaatctgtttgatgttacttcagttcttgggggtatgattcctgattgtgtcataactgtggcaggctcaagaacttatgcttttggcaagcagggcatccattccgagtccaccgagtgcagctcgtaaatcagattcgcctatttccgctgctgcgaaacttacagtgcccgaggctttgcctgcaaggcagattgtagttcagaaaccagaggcttctgtgcctcttgtatcaggggtttcgaatccgatcaccatcgtgtcgcaagctgtgactctccccaagagcttttctagctccaacgactctgcggggccgaaatctggaggcctaccgttggctgttactcctttgagccaggcatccccgtcccagccgattccagtagcaaccacaaatgcttcggctatcatgccaagaggtatatggctctaccttcatgttgctagttctgtaatgtttttggaattctgaattcccggcgtaactactgtagtgtttcataaggtattcgagattgattcatgttcttgcttgttccagctgtgcctcaagctcgaaaagcatctctcgcccgattcttggagaagcgaaaggaaaggtataaatcgtgtcatcgtgtgtcttgtggttttactttgcagctgaaatctgttactatggtcttgtgcatatttttgacatgtgccttgtttatcatgtagagtgtcaagtgttgcgccatacccatcctcaaagagtccactagagagcagtgacaccattggcagtcccagcacaccgagcaaatcatcgtgcacggacatcaccccttcgaccaacaactgcgaggactcactgtgcttaggtcagccaaggaacatcagcttcagcagccaggagccccccagcacaaagttacagatatgagacctggtgatcattgtataccgaagattcagctcagcgagagtcggctgaccttgatgccagatcggacgccttctttcgcatccgtgttagggtatgatgagacataggaagagatcactagatgctgtttctatcctggctgcaaaatctttctttggctagagctgtttataagtgctgatctagccacagccgccgccacttagtagtacgagagctgtgacattgcaggtaatttcaggctgttcttgattatttttgccctgagccatagcggcattggacttgagaggaaaagaaatgctgctgagttgtataggattacagattcggcgtatgtaattttgctgttttttggttctagccttaaacatacaaagctagcttcagaattcaaacagagtatccctgatgccaatatgccattgccatggccattttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0428400, RefSeq:Os08g0428400