Difference between revisions of "Os08g0436000"
(Created page with "{{JaponicaGene|
GeneName = Os08g0436000|
Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein|
Version = NM_001068420.1 GI:115476577 Gen...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0436000| | GeneName = Os08g0436000| | ||
Revision as of 20:50, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0436000 |
|---|---|
| Description |
RNA-binding region RNP-1 (RNA recognition motif) domain containing protein |
| Version |
NM_001068420.1 GI:115476577 GeneID:4345664 |
| Length |
5668 bp |
| Definition |
Oryza sativa Japonica Group Os08g0436000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:21261501..21267168 |
| Sequence Coding Region |
21261738..21262139,21262386..21262498,21263374..21263455,21263545..21263649,21263718..21263775 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:21261501..21267168 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:21261501..21267168 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgtcggggtcggcgacgcagttccggtacacgcagacgccgtccaaggtgctccacctccggaacatgccgtgggagtgcaccgaggaggagctcgtcgagctctgcaagcccttcggcagggtcgtcaacaccatgtgcaacgtcggcgccaaccgcaaccaggccttcgtcgagttcgcagatcaaaaccaggcaatttcaatggtttcatattatgcttcttcttcagaacctgctcaagttcgtggcaaaactgtatatatccagtactcaaacagacaagaaattaccaacaataaaggaactggtgattcctctggcaatgttcttcttgtcacttttgaaggtgtccagcctaatgatattagcatagatgtcattcatttggtattttccgcatttgggtttgtccacaagatagcaacctttgagaaggctgctggtttccaggcacttatccaatatactgatgctccaactgcactagaagcaaaaaattcgttggatggaagaagcatcccgagatatttacttcctgaacatgtccccacctgtcacctgcgcataaccttttctgcgcacaaggatttgaatatcaagtttcaatcacatcgtagcagggattacacgaatccatatcttcctgtgaatccaacagcaatcgagggaatcgcacagcccactttaggccctgatgggaagataaaggagcctgagagcaatgtgcttttggcttcaatagagaacatgcagtatgctgtgacggtggatgttctacatactgtgttctctgcttttggtactgttcaaaagattgcaatgtttgagaagaatggtggaatgcaggccttaattcaatatccagacatcacaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatggaggttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggcacatgatgagagaagcagagactacactgtttcatcagatcctagtgcacaaatgcaagctgcagcgcaagccccaggtcctagcactccaggagtggcatggcaaaacaccgcacccagtgcttccttttatggcagcactgcggcagcgactcctgttggacaagtgccagcttggaatccaaacatgcaggcaggtgcttttggatcggcatcgtctgcatacccaacccaaccaatgatgccaggatcagttccacactatccaggaattggatccagttccggagcactgccagtatcgttccaggcctcacatcagatgccacagtatggtgtacccccagctgctccacaccatgctccaccggctggccaaccaatgtatttcccgaaataa</cdnaseq> |
| Protein Sequence |
<aaseq>MPSGSATQFRYTQTPSKVLHLRNMPWECTEEELVELCKPFGRVV NTMCNVGANRNQAFVEFADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNK GTGDSSGNVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDA PTALEAKNSLDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV NPTAIEGIAQPTLGPDGKIKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAM FEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERS RDYTVSSDPSAQMQAAAQAPGPSTPGVAWQNTAPSASFYGSTAAATPVGQVPAWNPNM QAGAFGSASSAYPTQPMMPGSVPHYPGIGSSSGALPVSFQASHQMPQYGVPPAAPHHA PPAGQPMYFPK</aaseq> |
| Gene Sequence |
<dnaseqindica>5030..5431#4671..4783#3714..3795#3520..3624#3394..3451#3195..3290#3041..3114#2906..2968#2072..2281#191..373#aatctctctctctctctctctcaatctctcatctccagccgcgctttctctctctctctagctcccagcctcgacttcacccaaaccctagccctattgcgcgcgggagacccgccggcgaggcgcgcgcacggagcgagccggggggcgggagggccagccgccgccgccgccgcctgcagcagcgaggatgccgtcggggtcggcgacgcagttccggtacacgcagacgccgtccaaggtgctccacctccggaacatgccgtgggagtgcaccgaggaggagctcgtcgagctctgcaagcccttcggcagggtcgtcaacaccatgtgcaacgtcggcgccaaccgcaaccaggccttcgtcgagttcgtaaggacactcccctcccctccccccgattcctccctcctccgccccctgcccccgccatctgatcgattacggatttacggctgcgtgtgcgatcgtctcctctgtatgtgtgtgaggacgtggcttattaggatttggaggaatctgtccttttgtgggggttgcgatttagggtttatggcggtagcaagtcgttttgttgctcgattatgtgggagtatgatgtatgagagggaaaaaaattcttatcttctgtgatgatttgggcagtggtagttccagaatttggtgtttaattgttagtttaatatgtggtttgaataactaagatagtacggctctgtccaatgagatgcatacaaacaatacatcctttttgtcatgtgctggaaatgcgtgactcttgttggtgtttgcacttgtgtttgtgtttccatggtttattttggcatcttttgttgttgcgtgcaattggattttgtctggcatgacacggcgaatattcgtaggagcagggaaacaaactgatcttatttgttaacctgaataataaaattaacagcgaggaagatactgctgttggaaggatgacttatctagtgagcaagctttgggctatctgttaattgataagagatctgcattaagtttttatttatacatgtttgattgttgattgctaaaaaggttgtgttcctcattctgtatgctgtagtatcactttttggaatcaggatttttatggccagttttggttccttgaaacttttctatttcaatgttatttgttttgtaaggttgttggcctgttggttatgttgaattggggtatcagaaaagatgatttattaaagcaatttttcaccttgttgtaaaaagaagtgttcagtgttattaaggtgttaaggtggtttaagataacgtgggtatgcctaagcatcatagcacacaaggtgcaacaaggcagtgtaatatgagatggaggaggcttgattaagggagaaatctgcaaagaaaatagctagaaggagaaaaaaaccactaggccaagctgccagtccacagaagaccaacatcagcttcatgacaatacccccacgtcatcgtgcgcagccagttgaggagcagaacactaggcacgcaagctgagatcgacatctgcagccgcctgttttcagccacctcccccatagctgacctctgccagctatcactgccatcagaggtcaatgcctctgcccacctctctgtccaccgctgccgctgccagagattgagctgcagcaagcagcagcagctgggatctggatctagatctgatggtaggggtgtgggatctgcgacagcaagctggctgtggtaaggattgaggaaggtgaccacaaccagctagggttccagtatgagcttgcccccttctttccctttcttcactggttttgcctataaggcagagtgggtgtcttgacccatgcaaccgctaaccactatggagacactaaagtgacgccttaacagccatggtgttctctatgtaataaaagaaaatgacacaattattattatttagttgcataaatgtgttgccctttggattgatttagcggaagtttcaaatgaacagtgaactgtagactggacattgaattgctgttctttgttcctcacttatattataaatgtaccttttttcaggcagatcaaaaccaggcaatttcaatggtttcatattatgcttcttcttcagaacctgctcaagttcgtggcaaaactgtatatatccagtactcaaacagacaagaaattaccaacaataaaggaactggtgattcctctggcaatgttcttcttgtcacttttgaaggtgtccagcctaatgatattagcatagatgtcattcatttggtaagtatgcatgttttacatgtgatgcacttcacttagctaacagcttggttggaataaacttatattgcctatatttcaaaattgacttgggcctctgttgctatgatacagtgatcttttttttatcgggacatatctttatcaaaataaaaccggcttgatgtaaactaattactaaatgcacactattattgatttgttatgcttgctagacaatgttaatccatggactttaggacatgcatactgattcctggcgaaaaacttaatgattcacgtagtctttaaaagcactgcagactgcctatttcacatacattgtatggcagttaagatacttaaatggcacctccatgtcaagggaaattcaaaatctcctctttcttctaccaggtttattacttcttcaatttgtcatcctgcatcatatgacttgtcagcatagcatgttcactaatataataatagcatccaagttcattacttcagtacaattcagttctatgctccatgtccttctctttctgcataatcttgcatgtgctcttcgactgattagtcgaaactcgaaagtggacttgtatcctcatcttttgtcgcaatggtttgtgaatgttttaggtattttccgcatttgggtttgtccacaagatagcaacctttgagaaggctgctggtttccaggtaagatagttcttatattgagctgctactataattcttgtaagttcagcttatcagctggaattttcgtaggcacttatccaatatactgatgctccaactgcactagaagcaaaaaattcgttggatggaagaagcatcccgaggtagcacttcattttataactattattattatgcgctacaaacctccgatgcagcattactgaaatgtcaagtcatgcagatatttacttcctgaacatgtccccacctgtcacctgcgcataaccttttctgcgcacaaggatttgaatatcaagtttcaatcacatcgtagcaggtaaagagggaagctggcgatgtttaaatttgattttaacctccattagcatatgcttgatgagacaatactcaaattcacatcactaactgtttggttacagggattacacgaatccatatcttcctgtgaatccaacagcaatcgagggaatcgcacaggtatgctttaacatttcatactattcgttgtgttctttctctccttccttacagtggaggttatgcagcccactttaggccctgatgggaagataaaggagcctgagagcaatgtgcttttggcttcaatagagaacatgcagtatgctgtgacggtggatgttctacatactgtaagtatattttattcttactgactccaggtgttttatctaaaataaggacaaaattagtatataatcatgttatgagataatttcaggtgttctctgcttttggtactgttcaaaagattgcaatgtttgagaagaatggtggaatgcaggccttaattcaatatccaggtattttccaactagcatgcagctcacaggattttttgcaccttgttttgttggatgtacataacctgaatgcacttgggtgtgatatttgttcattcatcgtatagtactatagttagttcctgataagccatctcatagatgataataaaccgtgtaacctgtgatgccatgctgactattgagctacatatttgtttatgcatcataagtttctaaacctggaaacttcagcagaggggtgtcggagttcgtgaaggcttagaatggacatctgcaactatccacagctataaagttgcctttagtaatttcttgatcatttttaccttctgtgtaagcatattctctttcttagtagaggtttgcttctgaggtctttctgtcatcactgcatcaatattttcctcctggtactctgcattagataatacctatcttaattgtttccaatccttgcacttttgagtaagattagcgttcaccatgtcaacaaagacctgtcttgcatctgcagtccaaaagccatcgtggcatttgatgtgtggtcaatttctatggctatatctatacctaagtgtgacttcatagtggcacctcatattacaatatttggaatttggttttatcaaatctctgatcctccagaaatgacttcactagtttgtgtaacttgggacaaaaaatattacttcatcaaacggaaagagttttgctgttcactttgtttcctcgatcacaagcactacaaatgcattcctcatttgccaatggaatctattttacttcagcttttcaatgatctaatcatgcattgcaataccattttagtttattggagttatcttataattgaaaaaactgttttattgcagacatcacaacggcagcagttgctaaacaagctttggaagggcactgcatatatgatggaggttactgtaagcttcatctgtcatactctcgtcatactgatctcaatgtaaaggtataaatgatagtttcaggctgtgtaaattaataaatattgaagtacatatatcagttgactaattgttgactaatgaatagtgaatgtaactcatttagaaaatagcgtactgctacatgaaagcagaataatatatcattcattcaatttgacaaagtacgctttctgaacatatttcttttttctcctacagcttccttctgcatttttcctcctaatggagttctatttttttacattcaggcacatgatgagagaagcagagactacactgtttcatcagatcctagtgcacaaatgcaagctgcagcgcaagccccaggtcctagcactccaggagtggcatggcaaaacaccgcacccagtgcttccttttatggcagcactgcggcagcgactcctgttggacaagtgccagcttggaatccaaacatgcaggcaggtgcttttggatcggcatcgtctgcatacccaacccaaccaatgatgccaggatcagttccacactatccaggaattggatccagttccggagcactgccagtatcgttccaggcctcacatcagatgccacagtatggtgtacccccagctgctccacaccatgctccaccggctggccaaccaatgtatttcccgaaataatctatctttatccgatgtacaagcaattagagcaattgcaaatgttgcctgcaatactcgggtctgggtatcttctcttcaaattttgggttgtaactcgtctatgcagctattcatattgtaactcagtgagctccctgtcgcaaatgtgcctctgcgtcagtcgctgtctgtaaactgtccggcaattagaaattcccatccttagcatgcctggtattgttcagctcgaaactg</dnaseqindica> 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