Difference between revisions of "Os08g0478500"
(Created page with "{{JaponicaGene|
GeneName = Os08g0478500|
Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein|
Version = NM_001068586.1 GI:115476909 GeneID:4...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0478500| | GeneName = Os08g0478500| | ||
Revision as of 20:51, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0478500 |
|---|---|
| Description |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein |
| Version |
NM_001068586.1 GI:115476909 GeneID:4345840 |
| Length |
7431 bp |
| Definition |
Oryza sativa Japonica Group Os08g0478500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:23681707..23689137 |
| Sequence Coding Region |
23681799..23682471,23682649..23682710,23682982..23683197,23683372..23683456,23684479..23684636 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:23681707..23689137 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:23681707..23689137 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggaggcggcgggttcgtcgtcgtcgtcgtcggcgtcggcggtggtggtggctgtggtgattgcggtggtggtggtggtgtgggttgtggtgcggcggaaggtgaggcgcgccgcggcgcggagggaggaggtgctgcggctcacgcggctggcgcaggaggagtcggagatggcggaggtggagtgcgcgcgcgcctactactcggagctgttcccgagcgtcgtgcacgcgacggagatggtggatgaggcggcgtggggggcgccgccggccgtggttccggctcaggcggaggcagaggcggagatggaggcccgggcccagccgcagccgcagccgccggtgggtgccaagggggtctgcgcggtgtgcttccggccgacgacgttcaggtgcaagcagtgcaaggctgtcaagtactgttccttcaaatgccagatagcccactggagacagggtcataaaaatgaatgccgcccaccaagcactgatgctaatcatgatgatgtggctgaactttctgttgcaaaggaaaggaaaattgagcagacaagtgcttctgaagaaaacatagctgaaaccaacacggcagccaccgtgaagaatttaaatgataaaacaaaagatatgccctcagaagtacttgcttcggtggaggttcctgatgatgaccattctgtcagtgcggtcaaactccctcaaagttcttcacaagtagcttctcttggcagtagaaagacagaatcaaatatgaaacctacaactcctgttgaaaatggttcttacacaaaggacttagatgaggcgttggtgtgtagatttcaaccttctccaccaaagattagtggctctggaagtcttatcaacaaagagtccttaattgattccaagaagcaccaggattgctctcaaactagtaacagcaaaaaatatgcagataacaacaatgctcaagctgctctacctgttgcagtagaacctaaaacttccaggactgctcttcatgtggaagttggacactccaagacaaaagctgctggctcagacaacattggtgtgtcaaaaatggtgccatctgttttgactgttgataaagtttctcctgttcccggtggacgttctgttacacctaattcatcaaaaagggctgataatattgctgaaaggaattctaaaccatcagagaaatcaatttcaacagcaaatagcctggcaacatctctgaaaaaaattgtcaggcagcaaacagcaccaaaagttgtgaggcattatccatcagagccaacacattttccatatgagcttttcattaagctctatgaaaaggttgaattgcaaccgtttggtcttcataaccttggcaatagttgctatgcaaatgctgttcttcagtgcttaatgtttacccgaccacttacatcatatcttttgggagggcttcattcaaaaaattgttccaaaaaggaatggtgcttcatgtgtgaatttgaaaaactcgttggggagggcagacaaggcaagattgctttgtcaccaactgggatactctctcatttgcctgacattggaagtagctttggtcctggtaaacaagaagatgctcatgaattccttaggtacgccattgatgctatgcaatctgtatgcatgaaggaagccaggaaaagcggcactcatcggttacacgaagaaacaacacttatgcaattaatatttgggggctatctgcgatctaagataagatgcacaagatgtgatgctacttccgagcaacatgagcgtattttggatcttactgttgaaatagatggcgacatcagttcactggaaggagcacttgagcgatttacatctacagaagtcttggatggagataataaatataaatgcagcagatgcaaatcgcatgagcgcgctaaaaagaagctgacaatatcggaagcaccaaatgtcctgactattgcgctgaaaagatatcagtctggaaagtttggaaagatcaacaaagccatcagatttccagagaccttgaacttgcagcgctatatgagcccaaaagctgatgacacttcccctgtttacagcctgtatgcagtggttgtccatcatgatattatgaatgccgccttttctggtcattatgtatgctatgtgaaggacacgcatgggaagtggtacaaaacagatgacagtcaggtcaaacctgtatctctggaaaatgtcatgtcgaagtgcgcatacatgctgctctatgcaaggtgttcaccaagagctccaagctctgtaaggccagcgctgatggctcaagatccagcacgtgtaaagaaggacaaggcaagggtaaattcaggacggtggcatggaggaggtcccatacaccaaggtggtcagatgtacgcagatcacatgacagatgatttgccccatacatatgacgagtttggacatggaccatattcgccagcagaatctcctagtccaagtgagagttcatcaattttcaccagttccgacacagggtcacatagcaccgacagcagtgaaagcactagaaactctaccagtgaggatatggaacgcctcatatttggtgatcaagtttcatactttgatggctctatgttcggacatggggaaaacggccgtatgacttattcccgatcaaagtctagcttgggtaccagttcatcgggtcaagaggtggatcagtataggcctgacgagcacaggcttcagggtgccagggagggttggaatcagggcgatgaaagttcttccttgtatactaaccaaagtaaacatcaatttagtagtaagttaacagaacaatataggaggaggttagatgggactgagcatgatcctggagaagccaatagtgttttattgaggagatcggctagggaaaggacggcccaaacattttattga</cdnaseq> |
| Protein Sequence |
<aaseq>MAEAAGSSSSSSASAVVVAVVIAVVVVVWVVVRRKVRRAAARRE EVLRLTRLAQEESEMAEVECARAYYSELFPSVVHATEMVDEAAWGAPPAVVPAQAEAE AEMEARAQPQPQPPVGAKGVCAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKNEC RPPSTDANHDDVAELSVAKERKIEQTSASEENIAETNTAATVKNLNDKTKDMPSEVLA SVEVPDDDHSVSAVKLPQSSSQVASLGSRKTESNMKPTTPVENGSYTKDLDEALVCRF QPSPPKISGSGSLINKESLIDSKKHQDCSQTSNSKKYADNNNAQAALPVAVEPKTSRT ALHVEVGHSKTKAAGSDNIGVSKMVPSVLTVDKVSPVPGGRSVTPNSSKRADNIAERN SKPSEKSISTANSLATSLKKIVRQQTAPKVVRHYPSEPTHFPYELFIKLYEKVELQPF GLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKLVGEGRQG KIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEE TTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVL DGDNKYKCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQ RYMSPKADDTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSL ENVMSKCAYMLLYARCSPRAPSSVRPALMAQDPARVKKDKARVNSGRWHGGGPIHQGG QMYADHMTDDLPHTYDEFGHGPYSPAESPSPSESSSIFTSSDTGSHSTDSSESTRNST SEDMERLIFGDQVSYFDGSMFGHGENGRMTYSRSKSSLGTSSSGQEVDQYRPDEHRLQ GAREGWNQGDESSSLYTNQSKHQFSSKLTEQYRRRLDGTEHDPGEANSVLLRRSARER TAQTFY</aaseq> |
| Gene Sequence |
<dnaseqindica>6667..7339#6428..6489#5941..6156#5682..5766#4502..4659#4266..4386#3648..3810#3476..3561#3149..3231#2214..3075#198..625#gaaggggaggggaaaaaattggaagccctagattttggcgggttggctacggcgaggtgcgggggaggggtcggggtcgggatcggcgggcggatccggtgggtggaggaggttgggcggcgagatctatgcggtggggaggggaggggaggaggaggaggaggggagcggggtgagaggggaggaggaggtggtggatggcggaggcggcgggttcgtcgtcgtcgtcgtcggcgtcggcggtggtggtggctgtggtgattgcggtggtggtggtggtgtgggttgtggtgcggcggaaggtgaggcgcgccgcggcgcggagggaggaggtgctgcggctcacgcggctggcgcaggaggagtcggagatggcggaggtggagtgcgcgcgcgcctactactcggagctgttcccgagcgtcgtgcacgcgacggagatggtggatgaggcggcgtggggggcgccgccggccgtggttccggctcaggcggaggcagaggcggagatggaggcccgggcccagccgcagccgcagccgccggtgggtgccaagggggtctgcgcggtgtgcttccggccgacgacgttcaggtgcaagcagtgcaaggctgtcaagtactggtgagttgtctgaattctgaaaccctcttctgagtccccctttgcatttcgtgaaatttcaccgggtgaaaggggaatcggaaagagagttctgcgattggtagtgcggatttctgtatttcgtagtaatttcggtgttcaaccttgaggagggctagtggttccagaaagcctggaatttgcgtctagttttggtttgcgcataacatgaccatcttgaataactgattggcaagtgagtttggtatggataaccctctatttagtcttttctttgtgcccatttgttgcatttgaagaatctaatgtggacatatggcattgctaacagaaacacagttttgaaagacattagcctgtgaatcgctcatctgtcatattcccaactaggatcctaatggctcaattctttctattacttttgttgatgatgatcttcttggaaactttactttttttagcctgacttaaagttgtccgtccattggctcggggcacatatattattgtcttttatttatgaatgaacttaggcacatgaccgggtttaagatgttaggatctcaatgtctaaaatgttctctagatgagaaaagtatcattttcacaaagcaatattatttgttgtgatggaatttactggtatcgttttcatacatgatgcttcctatgctcagatgctctacatcgaggcaacaaacatagatgatttatcaaaccatgttcaataaatagttgagactctgaaattcatagttattttttgcgggaaaagattcataccttttttttttgcggggagggaaaagattcatactgcttaacagtggtgattcttcacaatatttgtttcatgcgcataagcttatctctaatcatatcctttaaatttcactaaattgcaaatgtttggacaaaattatcacaaaacaacatatttacgccataataaactgtagatttagcatagaatatatcccgatactacagattgaagccattttgttgcaaaaatataagatttaaccccaattttatcacaaaactatatatttttaagatgtacacacatcaatcatgctaatctgaagggtattcagaaaattaaattccataatttcagaaaattaaattccataattttcattgacaaatttcatcacctgctacacattcatgagtatatttatgtgttaacccatgattatggattaaacgaatctgaagttttcgaggttgatagtcgtaataagaatttagcaaactacttatggaaccgttgattacttgagtttatcagtagattttttatggattagtttagttaatcatcctaacaaagatcattattggattacaacaactatttttattctgagttttatcctttgattctaaactcataatacttaacattgaggcttaatttactggatatgatatcaacattgataccttttcaaactcttaagttattatctttgttacattgtatacattgaaaattctgagctatagtgtaatgttgtgcatggcattagaatgtgctacttgttcaacttcaatgataccttcattttttttgcagttccttcaaatgccagatagcccactggagacagggtcataaaaatgaatgccgcccaccaagcactgatgctaatcatgatgatgtggctgaactttctgttgcaaaggaaaggaaaattgagcagacaagtgcttctgaagaaaacatagctgaaaccaacacggcagccaccgtgaagaatttaaatgataaaacaaaagatatgccctcagaagtacttgcttcggtggaggttcctgatgatgaccattctgtcagtgcggtcaaactccctcaaagttcttcacaagtagcttctcttggcagtagaaagacagaatcaaatatgaaacctacaactcctgttgaaaatggttcttacacaaaggacttagatgaggcgttggtgtgtagatttcaaccttctccaccaaagattagtggctctggaagtcttatcaacaaagagtccttaattgattccaagaagcaccaggattgctctcaaactagtaacagcaaaaaatatgcagataacaacaatgctcaagctgctctacctgttgcagtagaacctaaaacttccaggactgctcttcatgtggaagttggacactccaagacaaaagctgctggctcagacaacattggtgtgtcaaaaatggtgccatctgttttgactgttgataaagtttctcctgttcccggtggacgttctgttacacctaattcatcaaaaagggctgataatattgctgaaaggaattctaaaccatcagagaaatcaatttcaacagcaaatagcctggcaacatctctgaaaaaaattgtcaggcagcaaacagcaccaaaagttgtgaggcattatccatcagagccagtaagcaaaactgaactgctgtgtttatagttagtaggagttttctatctgctaatagttttatttttttcagacacattttccatatgagcttttcattaagctctatgaaaaggttgaattgcaaccgtttggtcttcataaccttggcaataggtaagttttggattatttctggatagttggaacacatatatgtgtttcttttttgcttatctcattattttagcatttctctaagatttataacttagctctccccatccttttgtggctatcaggctacatatcacagcttgcatcgaattttatgataatttgtggtgtttatgcaggaattagcttagtacagtgttctgtgttcaccctgtttcaccttgttttttcctctctcttgcagttgctatgcaaatgctgttcttcagtgcttaatgtttacccgaccacttacatcatatcttttgggagggcttcattcaaaaaattgtaatgttctattactgtgtttattacatcattgtttcccataaagcatttctttgagtaattatttaatatatcatactctctaggttccaaaaaggaatggtgcttcatgtgtgaatttgaaaaactcgttggggagggcagacaaggcaagattgctttgtcaccaactgggatactctctcatttgcctgacattggaagtagctttggtcctggtaaacaagaagatgctcatgaattccttaggtaagttattttttttaattgacagtttccagtttaagaagttaagaattagtttagcagaagttaggaacatttatgtgcctcaacgaggaatgcactgggggataagagcgggggtatcatatcacatattcatgcagaaaattaaagttaataggcctacttgaatatttgagtggtagccggagtgcttattaggttctgtggtctgtggtctgcatgaagaatctaatgagcaatgacaacctttttccctatcatctggattcggagttttggtggtggtttgcatcagtataatgttgtaatcctggtagaaacaacctaaacatattattttgggtatgaattggcattgccaatgtccttgttttgaattagcttagttaattgtgctcaaccagttcttttcaacaatagtgtctgatggaaccgcactacctgatctgttgtaggtacgccattgatgctatgcaatctgtatgcatgaaggaagccaggaaaagcggcactcatcggttacacgaagaaacaacacttatgcaattaatatttgggggctatctgcgatctaaggttttcttcacagttcacagaacaagtttaaatttctgttgtttgtactcaattacctgagatcagctgtgtaatgaagccccactcctattgactgcttttttccttcttctagataagatgcacaagatgtgatgctacttccgagcaacatgagcgtattttggatcttactgttgaaatagatggcgacatcagttcactggaaggagcacttgagcgatttacatctacagaagtcttggatggagataataaatataaatgcagcaggtttattacttagttgacctctatctttctctgccagctcttgctgttccttttgtgctcatatgcgttcatacagtgcacatcttttttgccactttccaaaatcctcaaaatgcttgtcactgagaccgtagtaagttaaggacctctattatagtgttgttgtaatttcaaaacgaattataggcacctcagacctgtagcctaagttcgtattcactttctgggatttagggatcgattttttttcccatgtcactaatcaggatttaagaggggaatgtgtaatccttagtgaaagggaaaaataaaaataaaaggataggcatgcattattgtttgtgaaagttggccaagagaggccttacaaaattaattcgtatcataacataatcaggtagcatgaggataccagtctaatgtgtagagtgtatcacgcaaagaccacgtaaatactgatgttatttgtgagcaccatgctggtgagctttctacttgttgtgaaactgaatgtgcattacatgggaactctgaattgcagagtgtttattaatttacggcgaagtatgagtgaccaactgtggtggttaaccgtcacgatagacttattgaaacgctatcacatgtttgatttttgaactaccgtatccaagctttctacaacaacatgagtagtgccttcagatctggcaaattgttgagatggaaaattgatttcccagaaattgtcatgtatatccatgcaaaagttgcatatattttagtcttgaaaacgagatatcttctcgagggacttttgaaaaagaattggtggaacgctctgttgcttgttaaaattgctttgcttctgtgaaataataggaaggtggatgtcataagacgtgtcctgttaatctagttctataataaatgtatcgtgttagagctgtaataactacatatttaatcacttctgtgtaacttgactgcttttgtgcctagtccctaatgctgatactcctaactctactatgtaatgtcagatgcaaatcgcatgagcgcgctaaaaagaagctgacaatatcggaagcaccaaatgtcctgactattgcgctgaaaagatatcaggtatcatctacaataagacctttttttttgcttttcttataatagcaacactgaaggaacttgtttacttattcaagagttcattgtttcatttatcctagttttgaataagtccaacaagcattgaaattgtatttagtgtttgactaatacttttcttctgtatctatacagtctggaaagtttggaaagatcaacaaagccatcagatttccagagaccttgaacttgcagcgctatatgagcccaaaagctgatgacacttcccctgtttacagcctgtatgcagtggttgtccatcatgatattatgaatgccgccttttctggtcattatgtatgctatgtgaaggacacgcatgggaagtggtacaaaacagatgacagtcaggtaaacaagctctttcaccatgtttttgcctatacctgcccaatgttttatcactggtaaaacactatttagtaaagccgattatgttcattcctggatcttccggagccttgttttcctattttaagtaatgaataatctttagctatgagagtactacttactgaggataatctatgtgttagtgaaagcatactgaacagaatacgcgacttcaaaaggcactgcaccattgttttgttctaactggagggtaaattgctttgttcaggtcaaacctgtatctctggaaaatgtcatgtcgaagtgcgcatacatgctgctctatgcaaggtagattctcttgtttcattagagagaagatcctttttgttatttttctttttgccacttgtttcaaggagcggaaaaaagagaagttctcatgaatagcagacactggcaattacttgtctgtgcttgcctggatctttatcaggacatatataaatcctttgtcaaccatttcaggtgttcaccaagagctccaagctctgtaaggccagcgctgatggctcaagatccagcacgtgtaaagaaggacaaggcaagggtaaattcaggacggtggcatggaggaggtcccatacaccaaggtggtcagatgtacgcagatcacatgacagatgatttgccccatacatatgacgagtttggacatggaccatattcgccagcagaatctcctagtccaagtgagagttcatcaattttcaccagttccgacacagggtcacatagcaccgacagcagtgaaagcactagaaactctaccagtgaggatatggaacgcctcatatttggtgatcaagtttcatactttgatggctctatgttcggacatggggaaaacggccgtatgacttattcccgatcaaagtctagcttgggtaccagttcatcgggtcaagaggtggatcagtataggcctgacgagcacaggcttcagggtgccagggagggttggaatcagggcgatgaaagttcttccttgtatactaaccaaagtaaacatcaatttagtagtaagttaacagaacaatataggaggaggttagatgggactgagcatgatcctggagaagccaatagtgttttattgaggagatcggctagggaaaggacggcccaaacattttattgacatgtggagggtttgggttgtagaggtataataatgtaggatgtattattaccccactgcaatgaaaaaggaaaaaatggctcagtttgtag</dnaseqindica> |
| External Link(s) |
