Difference between revisions of "Os08g0519300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os08g0519300| Description = Glycoside hydrolase, family 18 protein| Version = NM_001068793.1 GI:115477323 GeneID:4346055| Length = 906 bp| Defi...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os08g0519300|
 
GeneName = Os08g0519300|

Revision as of 20:52, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0519300

Description

Glycoside hydrolase, family 18 protein

Version

NM_001068793.1 GI:115477323 GeneID:4346055

Length

906 bp

Definition

Oryza sativa Japonica Group Os08g0519300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25866461..25867366

Sequence Coding Region

25866461..25866883,25866938..25867366

Expression

GEO Profiles:Os08g0519300

Genome Context

<gbrowseImage1> name=NC_008401:25866461..25867366 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:25866461..25867366 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgatccgacgccggctcctcccaattctgtcccttctcctcgccgtcaccttcctcgccggcgttgcgacggcgaagaagaccggccaactcaccgtcttctggggacgcaacaagaacgagggcacccttcgcgagacctgcgacacgggactctacaacatcgtcatcatctccttctacagcgtgttcggccatggccgctactggggcgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaaacacatctccgtcttcctctccatcggcggcgccggcaatgattactccctcccatcctcccaatccgccgccgacgtcgccgacaacatctggaacgcgcacatggacggccgccgccccggcgtgttccgcccattcggcgacgccgccctcgccgtcaagctctacgcatacaacaaattgtaccgtgctcggacgccggtgaggctgacggcgacggtcaggtgtatgttcccggacatgaggatgacgaaggcattggacacgaagcttttcgagcgaatccatgtcaggttctacgacgacgccaagtgctcctacaaccatgggggcctcgccggcgtgatggcgcagtggagcaaatggacggcgaggtacccgaacagcgaggtttatcttggtctcgcggcggtgaacttgccggggaagaatgacaatgtgtttgtcaagcagctctactactatctgcttcccaatgtgcagaaggcgaagaattatggtgggattatgctttgggacaggttctttgacaagcagactggttacggcaaaaccgtcaagtactgggcttaa</cdnaseq>

Protein Sequence

<aaseq>MALIRRRLLPILSLLLAVTFLAGVATAKKTGQLTVFWGRNKNEG TLRETCDTGLYNIVIISFYSVFGHGRYWGDLSGHDLRPIGADNKHCQSKHISVFLSIG GAGNDYSLPSSQSAADVADNIWNAHMDGRRPGVFRPFGDAALAVKLYAYNKLYRARTP VRLTATVRCMFPDMRMTKALDTKLFERIHVRFYDDAKCSYNHGGLAGVMAQWSKWTAR YPNSEVYLGLAAVNLPGKNDNVFVKQLYYYLLPNVQKAKNYGGIMLWDRFFDKQTGYG KTVKYWA</aaseq>

Gene Sequence

<dnaseqindica>484..906#1..429#atggcgctgatccgacgccggctcctcccaattctgtcccttctcctcgccgtcaccttcctcgccggcgttgcgacggcgaagaagaccggccaactcaccgtcttctggggacgcaacaagaacgagggcacccttcgcgagacctgcgacacgggactctacaacatcgtcatcatctccttctacagcgtgttcggccatggccgctactggggcgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaaacacatctccgtcttcctctccatcggcggcgccggcaatgattactccctcccatcctcccaatccgccgccgacgtcgccgacaacatctggaacgcgcacatggacggccgccgccccggcgtgttccgcccattcggcgacgccgccgtcgacggcatcgatttcttcatcgacaacggatcgcccgaccactaagacgagctcgccgtcaagctctacgcatacaacaaattgtaccgtgctcggacgccggtgaggctgacggcgacggtcaggtgtatgttcccggacatgaggatgacgaaggcattggacacgaagcttttcgagcgaatccatgtcaggttctacgacgacgccaagtgctcctacaaccatgggggcctcgccggcgtgatggcgcagtggagcaaatggacggcgaggtacccgaacagcgaggtttatcttggtctcgcggcggtgaacttgccggggaagaatgacaatgtgtttgtcaagcagctctactactatctgcttcccaatgtgcagaaggcgaagaattatggtgggattatgctttgggacaggttctttgacaagcagactggttacggcaaaaccgtcaagtactgggcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0519300, RefSeq:Os08g0519300