Difference between revisions of "Os08g0540300"
(Created page with "{{JaponicaGene|
GeneName = Os08g0540300|
Description = Zinc finger, RING-type domain containing protein|
Version = NM_001068917.1 GI:115477572 GeneID:4346186|
Length = 758...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os08g0540300| | GeneName = Os08g0540300| | ||
Revision as of 20:53, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0540300 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001068917.1 GI:115477572 GeneID:4346186 |
| Length |
7588 bp |
| Definition |
Oryza sativa Japonica Group Os08g0540300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27135374..27142961 |
| Sequence Coding Region |
27135540..27135770,27136865..27136986,27137537..27137639,27137777..27137867,27138098..27138270 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27135374..27142961 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27135374..27142961 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggactccgacgccgagatgcccatgtccagcgacgaagagatgttggatgacgaggactattacgactacagtgatgacatgggtgaggacgatgatgggagcggcggcgggggcgggggagatagcgatggggaggaggaggaggagggggatgaggagctggtgggcggcgactacgagggccgcgaggcggaggggagcgacgaggtggtgtcccgccgcgagcagagatacattgtattaactgaaaaggatataaatgagcgtcaagaggaagatataggcaaggtatctgctgtactatcgattcgaagggaggaggcgtgtgttcttcttcatcactacaaatggaacatcagcaagttaagcgatgaatggtttgcggatgaagaaaaagttcgtgatattgttggattacttttaaatggaattgatcttcctaactctagaaagctaacttgtggaatatgttttgaagggtattcttctgatgtgatgagttctgctgattgtgatcatttttattgccatgaatgctgggaaggttatattagtgctgcaataagtgatggtccaggatgtttgtcattgcgatgccctgatccatcttgtggtgctatggttcttcagaacatgattaataagttagctaaagatgatgataaagtgagatatgcacgatttatcttacgtgcatatgttgaagatagcaagaagactaaatggtgtccagctcctgactgtacatgtgcagtggaatttgtcagcgatgggaactatgatgtctcatgcaattgcaaattcagtttttgttggaactgcacggaggaagctcatcgaccagtgaactgtgagactgtttctaggtggatattaaagaatagcgcagaatctgaaaatatgaactggatactggctaattctaagccgtgcccaaaatgcaaacgaccaatagagaaaaaccagggatgcatgcatatgacttgcactccaccttgcaaatttgagttctgctggttatgtctgggttcatgggctgaacatggggagagaactggtggattttacgcttgtaatcgctatgaatcagcaaagaaggagggagtttatgatgagactgaagcaaggagggaaagagccaaaaattcacttgagagatacatgcattactatgagcgctgggcatctaatcagacgtcgaggcagaaggcacaagcagatctgcaaaaggcagaaaaggaacaacttgcaaaattaacagatgtttttggaataccggagacccaactgaagttcataattgaagcttggtcacagattattgaatgcaggcgggtactcaaatggacatatgcttatggctattatctggacgacaaggtcaagagcgaatttttcgagtacctgcaaggtgaagctgagtctggtctggagcgtcttcaccaatgtgctgagaaagacctgcaatcatttttgactgtgagatctgataatactgaacctgcaccatcaattgctgaattcggtgacttccgggtgaagcttgcggggctgacaagtgtgactcggaattattttgagaaccttgttcaagcactggaggctggcttggaggatgtacactctactgcccagggtaccacatcaagcaatgccaccaacatcccctccaagaaagcagtcactaaaggcaaaacaaagaagcagcttcctagaacatcttcggacaactcagatgaaggctggccttgtgagcgctgcacgtttattaacccttcatcggtggatgcatgcagcgtctgcgataagcatagatactag</cdnaseq> |
| Protein Sequence |
<aaseq>MDSDAEMPMSSDEEMLDDEDYYDYSDDMGEDDDGSGGGGGGDSD GEEEEEGDEELVGGDYEGREAEGSDEVVSRREQRYIVLTEKDINERQEEDIGKVSAVL SIRREEACVLLHHYKWNISKLSDEWFADEEKVRDIVGLLLNGIDLPNSRKLTCGICFE GYSSDVMSSADCDHFYCHECWEGYISAAISDGPGCLSLRCPDPSCGAMVLQNMINKLA KDDDKVRYARFILRAYVEDSKKTKWCPAPDCTCAVEFVSDGNYDVSCNCKFSFCWNCT EEAHRPVNCETVSRWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPC KFEFCWLCLGSWAEHGERTGGFYACNRYESAKKEGVYDETEARRERAKNSLERYMHYY ERWASNQTSRQKAQADLQKAEKEQLAKLTDVFGIPETQLKFIIEAWSQIIECRRVLKW TYAYGYYLDDKVKSEFFEYLQGEAESGLERLHQCAEKDLQSFLTVRSDNTEPAPSIAE FGDFRVKLAGLTSVTRNYFENLVQALEAGLEDVHSTAQGTTSSNATNIPSKKAVTKGK TKKQLPRTSSDNSDEGWPCERCTFINPSSVDACSVCDKHRY</aaseq> |
| Gene Sequence |
<dnaseqindica>167..397#1492..1613#2164..2266#2404..2494#2725..2897#3047..3148#3253..3341#4086..4193#4282..4372#4582..4671#5285..5332#5461..5532#5630..5723#5814..5961#6835..7096#cactggtatataaaaaacaccccatcctgtgtgcctgccgactcgcccacgcaactccgactctttccttccccaattctcccgtccaccggccgcggacctcgccggaaccctagccccgccgcccccctcccctccccgatcgcccgattcggtggtcggggtgatggactccgacgccgagatgcccatgtccagcgacgaagagatgttggatgacgaggactattacgactacagtgatgacatgggtgaggacgatgatgggagcggcggcgggggcgggggagatagcgatggggaggaggaggaggagggggatgaggagctggtgggcggcgactacgagggccgcgaggcggaggggagcgacgaggtggtgtcccgccgcgagcaggtgaggatttttttggtcggaagcagatcaggtggtggactggtggtggtgtttttttttcttttttcttttttttagcaggaagcgcgacggtcgatttcattaagattttgggaaaaaaaagttttcatacaactcgagattacaccccccttcggtgtagcttagcggggaggcaaggcgagctgaacgtagatcaggacctggaagatcaggggtgctagattggtagcgtcgaacggtctcgagaatggcgtcgttttgctgaaataaggattaggatgagcttatggcgtccttttcttttttttttctttttttctgaaatgaggatcgggatgagcttttgcggcagttcttaattttgatgtaccagtcagctaacgcgactgaaatatgttgataagattgatggtccagggtgcttgtcatgtactcggatgtgtagtagttgtttgtgattcacatctgctctttgggaaattaaggaatgttctgcttccgcacctagatgtgatctatcttccgctgttaggacagccttgggtgttttatacctgttcgcattgtgcgcaagccgacaagttgatgattacattagtgctaagatgcttagattgttatctgctcaatcaatattgatgctatacatggtgaatattgattagtgagcacaggtttacgcttaaggaataacatggtagagagtttagtctttgtaatggaactcatggatcggtgatgatgtactgctttcctgggttttgtttgtgctgatccaagcaaggttcacacctgggcatcaacagacgtagccaaatcatgatctatgttaaccattatatgcttgataatgtgttgctagtttgatagcttaaatacaaaggttaaaaggcggataattaatcgcatgcatcacgatgaaataccatatgtttctagagagctttctgtgctttctttccataatttccaagctggtactgtgtttggttgttttcgttcatgttgattggcacttctatgtcatcttgtttcactggatatccttgagtgtctctaaaaactggcccatgtttggtaactatggacagagatacattgtattaactgaaaaggatataaatgagcgtcaagaggaagatataggcaaggtatctgctgtactatcgattcgaagggaggaggcgtgtgttcttcttcatcactacaaatggtaagtttgttaaccgtcattcattgaatattcttttatcattatactccctccgtcccataatataagagattttgggtggatgtgacatatcctagtacttcgaatctggacaggtttcttaaccagattcatagtactaggatatatcacatccacccaaaatcccttatattttgggatggagggagtaagagtttactgaaatgagattgtacatatgtaatacatggtgtagtgagctatccaagtttcccttgatgcacatgcagtttgtttttactctgttacacttttcaaggtgctgtctgcaagcttccctttgataatttcttgaaaattatcactgtgaagtcttaggtagtacctccagattttgtatatgctggcaatttagtttacgtgtcattgctggtatgcaagtggtatgatgtgggattttctaactacttgacgattggaataagctgatcttccacttttggaatctagaaataagggtacaggtttgtatttgttctttgttaatctttatgagttctctgttcaggaacatcagcaagttaagcgatgaatggtttgcggatgaagaaaaagttcgtgatattgttggattacttttaaatggaattgatcttcctaactctagaaaggtttgtattatttattcaaatgccagtatattgttatcacttgtttgttgtgctggccacatgtcatatctgatcaaacctttggctgtggctacatatacactgtttcttacatctgacagctgttttggttgcagctaacttgtggaatatgttttgaagggtattcttctgatgtgatgagttctgctgattgtgatcatttttattgccatgaatgctgggaaggtctctctctctctctctctctctgtgcatgcttttgtgcataacttcctttttgcaattccaacactagcttagatagtttcaccatcagtgctcatgtatagactatcttgtagacttgtagttgttgtttttggtaaacatgatcaagatctgttcctgtgttgcagttattttatttttccctcagaataatgaaaatttatgataatataaattcaacctttcaggttatattagtgctgcaataagtgatggtccaggatgtttgtcattgcgatgccctgatccatcttgtggtgctatggttcttcagaacatgattaataagttagctaaagatgatgataaagtgagatatgcacgatttatcttacgtgcatatgttgaagatagcaagaaggtaatatgtttgaacaagctaactaattactccacttgatagttctttgtggagtacctattttttattgtttatttttctaacgatttgaaatgatgagctgtgctctttctgttaaccttttgtataacctatggcatttcctgcagactaaatggtgtccagctcctgactgtacatgtgcagtggaatttgtcagcgatgggaactatgatgtctcatgcaattgcaaattcagtttttgttggaacgttagtatttctggctccattttcctgacgatttaattctacttttttttattgctagtgatgaaaagtgtggagcttcatcaatgctttggtgatgtttgcagtgcacggaggaagctcatcgaccagtgaactgtgagactgtttctaggtggatattaaagaatagcgcagaatctgaaaatatgaactggtatggttcaggctcaaaactttattaagccatagtgtacggatagtgtatagataaggaattcattaatttttgtggagataaatctatgttcaaacatttgtgttgtatatttacttctttttttaacctatccttgatgccaatattgcagctatcttctaactttcctcatggttatgagtaaaaactgaggtggtgaaaaaaattgtgcatttaatttacgtacgtatattcagatgttatgtattcagaaacatcaaactttgtggacatcctcatgtgtgactggtggtctggaagcagaagatttgaggatgcaaggaactgtgaacactattaactctttgctgagtcagggctgcaagggctgatgcattgttttttaacaatatattatgacggaaaacatgtattatatgtggcactgtggcttaaacctcataataaacacctcttaatttatgttaaatacttggcattgactccatttttatcaattgatgacttctttttatggaaaaacttgtggaggctctagtgagaacattatgctgctcaagcgtttttgccatgtttacattacaggaatgtttgcctattatacaatgctgttagaattgtataccaatcttcagttcatggctagtccatgaatgctcaaatgtatttaaggtctttatgttgcttgaaatcatctaatcatgtcagatggtttatcatgttgttgatgatccttttcaggatactggctaattctaagccgtgcccaaaatgcaaacgaccaatagagaaaaaccagggatgcatgcatatgacttgcactccaccttgcaaatttgagttctgctggtatagtccaatgtctatgcttgctgaaatatttatgtccatattactagtgtatgtacctctcatttgttttctttgaacatttcaggttatgtctgggttcatgggctgaacatggggagagaactggtggattttacgcttgtaatcgctatgaatcagcaaagaaggagggagttgtatgttttatcttgagactatccaattgcatttagtagaaggaatcagtttctagatgtcttgtgtattttgttattgcttctgtagaattaaatgtttcaatcccacaagtcaatgtcgagtccaaattgacagtttgttcaattagttcattcattcatagaatcataagggttactttttcctaacttaattacctctaatgcagtatgatgagactgaagcaaggagggaaagagccaaaaattcacttgagagatacatgcattactatgagcgctgggcatctaatcagacggtatgttcaacatgctcaagtttgatgtctctttgagtttttttttctttctacaacaactatacgtgcagctttagtcattcttgtgctcataacttactctgtgtttttgaaccttctggtttacttggcaagtgttgtgttggccatatgcttgggcagatactaattttgacttaaattcttacctaccgagtgtagcccaactagctgcagctttatttgaagattacttgccaagtttatctcttactccctccgtcctagaatgtagcaacctaggataggatgagacccatcctaggacaacgaatttggacattcctcatgtccagattcgttgttctaagatgggtcatcctatcaacattatgggatgaaggtagtaagtgctaataaatgctcttttttaatttttatgttgtattaccttatcagttcatgatataaaaaaatacagttccagatgtttttctatacctgatgggtatatagtttctaatctactgtacatgcttgggatgaatgttctgcattgttctattctgaacttggaattttttctgctgtagtatgcaagtttctgtactgacatattcacttatattgccagtcgaggcagaaggcacaagcagatctgcaaaaggcagaaaaggaacaagtaagcattcgcatcatgttaggttgggggcgttgcatttagggcaagacataattgtttatcttcgccattcattcgtattttatatttgatagctgctaactctatttcttctctatgtgctacagcttgcaaaattaacagatgtttttggaataccggagacccaactgaagttcataattgaagcttggtcacaggtttgatatcataaatatgtcatgacccaaatgacactccatactatacaattcacctgcgtctgatgcatgcaccattccactatgtctatttcagattattgaatgcaggcgggtactcaaatggacatatgcttatggctattatctggacgacaaggtcaagagcgaatttttcgagtacctgcaaggtagttgtttgttgcattccaaaataaaatcctaagttctaccacgtgcttgccaaaaatcatgtggtatgtatattatatcttttataggtgaagctgagtctggtctggagcgtcttcaccaatgtgctgagaaagacctgcaatcatttttgactgtgagatctgataatactgaacctgcaccatcaattgctgaattcggtgacttccgggtgaagcttgcggggctgacaaggtatttcacagttattgtttttcctatatccttttgggtttggccatattcaactactgcatgctttaagatagttactcttgtttcaattagtactagtttttaggatgaacccaagggtttgcttttcttcatccttgaacgttttttttttttgccgggtcggccgaaaggttcggtcgaccaaatttcattaaggaaaaggggaacaaattacaaatgggctttatatcgacagtaggatgtcgagattagggtggggacaggtcccccaaacaatcgaagccatacagaaaaggctgaaggctacaataaaaatttgatgtcttacacaatatgaaaataacctccagacgtccacaccgaaacttcttctttgatgtcttccaataaccgctccacggtgtgttgcttgtgctgaaagattttggcgttgcgctccttccaaattatccttgaacgttcttacattgttcttaacaatccttgggtaggttcacatgaatgtaactaattatgccataatttaaatgccatttgagaattttagaagcctgagattttataattctaataaaggacatgaactttgtttgtgcccacctttctcttggtaatgatttagtattaatccatcatgtaaagtagtcaaacagtcaaagaggtggacatttcagctatgctctttacttgttgaccctagacttgcttctttgattttggtagttgttgtcgcaaatgtttttacttgctagcattttacaaggtcttgagatgctgtctatgctcatggatagcagcttccttgcctattctttattgtcatatgagctttgtttacgatatgttgactttgcttcgtctccactgcagtgtgactcggaattattttgagaaccttgttcaagcactggaggctggcttggaggatgtacactctactgcccagggtaccacatcaagcaatgccaccaacatcccctccaagaaagcagtcactaaaggcaaaacaaagaagcagcttcctagaacatcttcggacaactcagatgaaggctggccttgtgagcgctgcacgtttattaacccttcatcggtggatgcatgcagcgtctgcgataagcatagatactagatgaaaaactggctgaaagccagtgccccccataaatctcgaagctgttgagaaggtgggtgcttactcaaagctcatgagaagattgttgattgtagttctgttcctaaattatgtggcgttgaagaagagcttccaatggcagcaatggcgtacatgtgtgagtgaaggtccctggttgtatctagattgcagcaacaatgcaggaccgactatggagcgaaggtggatggggtacaaacatgtggtagtcttttttttttttactttctagcctatattatgtacatattagttatggtctgtagttgtgttaatgtggtgggcaatgttctgtttttgtttaaatgacatgagatgatgtggtgggtaaagttccaccccctgtactgaccaacctgtgaagctggagaatggtagatgtagctcttatctattgagcggtcatgtaaattaccaaagctcgtcataatctatggttgataaatcatg</dnaseqindica> |
| External Link(s) |
