Difference between revisions of "Os09g0294300"

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(Created page with "{{JaponicaGene| GeneName = Os09g0294300| Description = Ubiquitin-conjugating enzyme, E2 domain containing protein| Version = NM_001069330.1 GI:115478399 GeneID:4346643| Le...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0294300|
 
GeneName = Os09g0294300|

Revision as of 20:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0294300

Description

Ubiquitin-conjugating enzyme, E2 domain containing protein

Version

NM_001069330.1 GI:115478399 GeneID:4346643

Length

3336 bp

Definition

Oryza sativa Japonica Group Os09g0294300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7583338..7586673

Sequence Coding Region

7583573..7583866,7584179..7584490,7584593..7584732,7585024..7585087,7585163..7585393
,7585480..7585614,7586321..7586417,7586564..7586592

Expression

GEO Profiles:Os09g0294300

Genome Context

<gbrowseImage1> name=NC_008402:7583338..7586673 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7583338..7586673 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagggggagggctcctcttccaggaggtgggcgttgggcgatccggatgtcgtcgaggtgtcgccggaggcggcggcggcggcgcgttggagctccgcgcgcctgaagcggaagcgcacgactgttgctcacgaaataattgatctcgacgccaatgatgatcctgatggagttatgataatttgtgagaaggcgtcgagtcacaagagtaatcattctgttagtcatccttcggattggccaaagcatccaaagagtggcttggctgaggatgttcctggtccaagccatcaacctggcacgagcacagttctaccatggggatgcacaactcctgggagaccacggaagcataaggaaattaaaaccgtggataataaaattgatgagaagtataaggcatttaagcagtttgatactgttaccgaccacagtgatcactattattcaatgtcaggcaaagggaatgttcctgaagtcaagaagccatccaaggactgggtgaggcggattcaacatgaatggaaagttctggagaaagatttgccaggtacaatttttgtacgagtttatgaggataggatggaactacttagggctgtcattgttggaccggcaggcactccttaccatgatggacttttctttttcgatgtatatttcccttcccagtatcccaagaaacctccactagtgaactaccgctcgggagggttgcggcttaatccaaatctctatgatagcgggaaagtctgtcttagcctattgaacacttggtctgggcatgggtgtgagaagtggaacccatccaattcaaccatgctgcaggtcctagtctccattcaggccttggtgttgaatgcgaaaccttattttaatgaacctggttatgcagcttctgctaacacaccccagggggagaaaatgtccatggcttataatgaatcgacatttctcctatcctgcagaacaatgctgtattctcttcggaatccaccgaagcattttgaagacttcgcaagggttcatttttgcaagtacgggcgcaatatcctcgtaggatgcaaggcctacatgaatggtgcccaagttggatgccttgcaggaaacggagtgcaggatgttgatgaaggcgacaaaagctgctcagcgaacttcaaaggctccttgaagacgttatttgatgaactcatcaaggaatttacccggataggagttcattgccatgaattccagcctcagagggtgaatcctgggtctaccagagccaaggcggacaccacattgaggctatga</cdnaseq>

Protein Sequence

<aaseq>MAEGEGSSSRRWALGDPDVVEVSPEAAAAARWSSARLKRKRTTV AHEIIDLDANDDPDGVMIICEKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQPG TSTVLPWGCTTPGRPRKHKEIKTVDNKIDEKYKAFKQFDTVTDHSDHYYSMSGKGNVP EVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFF FDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTM LQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNP PKHFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNGVQDVDEGDKSCSANFKGSL KTLFDELIKEFTRIGVHCHEFQPQRVNPGSTRAKADTTLRL</aaseq>

Gene Sequence

<dnaseqindica>2808..3101#2184..2495#1942..2081#1587..1650#1281..1511#1060..1194#257..353#82..110#aaaaaatcttacccgccagcgagcgcgcggccgtggcggcgatcgcattggcggcgacgcggcgagctccaatcccctcctatggcggagggggagggctcctcttccaggtgagcgcgcacgctgccctcccctccacaccccgcgcagcacacgcgggcgctcgctgctcgggtcaagtctgatgcgtttctttgttcgttttgggggggttgcgatgcgatgcgatgcgatgctggggggtttttggtcgcaggaggtgggcgttgggcgatccggatgtcgtcgaggtgtcgccggaggcggcggcggcggcgcgttggagctccgcgcgcctgaagcggaagcgcacggaaggcctctctgctctctttcttcttcttctactttcttttcttttcttttttctttttttctttcttttttttatttttgcgtctctgaatcttgcaagggtttgggctgtctctcggtagggaggttccaatacgcgcgtgtatcagcattgggaagaggattggaaatggcctgattctttttttttcttttcttttgggtgccataatgtgttgtatgcctgttataaaacatggaacttgcagtttgttcattcttgattgatcaatggaaatccaattctgccatatagatcaccgcattggcttctgtagtgattccaccaagtctattgtggtggctggttgtgttcgtgtaatttatctgtcaaatgacaagatataccccatgctgaatgtggagtcgttgggtgtaatccaacttatagccattaggcatatcctctcatgaaagtagcaattgtttactggaaagccagcacaagtcatacatagttcactttgcattctgaagtatgtttttgtatcccatttccctttctatgtgtcttttgattgttcctgggaattagtttgtgccacacaagccgtgttacgacttttaaggtccatttcacgaaacccctccgagaaataacagtttcgttattgcaactttgagtaagatgcgaagaatctaatatgctatatgtttaatcaacagactgttgctcacgaaataattgatctcgacgccaatgatgatcctgatggagttatgataatttgtgagaaggcgtcgagtcacaagagtaatcattctgttagtcatccttcggattggccaaagcatccaaaggttaattcattggagtgtttttgtttaccattgtttagtgtgctatgctaacagttgatatatctttctccattgagtaattctagagtggcttggctgaggatgttcctggtccaagccatcaacctggcacgagcacagttctaccatggggatgcacaactcctgggagaccacggaagcataaggaaattaaaaccgtggataataaaattgatgagaagtataaggcatttaagcagtttgatactgttaccgaccacagtgatcactattattcaatgtcaggcaaagggaatgttcctgaagtcaagaaggtatgagtttgcacgtgcacgtgctctatcttcacttgatctctgcaattaaatgtaatcattgttttttggcagccatccaaggactgggtgaggcggattcaacatgaatggaaagttctggagaaagatttgccaggtagagctctctgttcttttatggtttatttactccagatgttgcacatttgattaagggagtgctcctttttttccccatactattgttcttccattcctctttctgtacacgcacattaggtgagcaaaagctctaatacatgtttacaataaaatatgaatccgtttttcataatgcatataatgaccttgagtatattctctgtaacttctattggatgtagctggatgttaaaactgaaatgcagtagttcatgtcctgactgcatctttcctccatattgagcaggtacaatttttgtacgagtttatgaggataggatggaactacttagggctgtcattgttggaccggcaggcactccttaccatgatggacttttctttttcgatgtatatttcccttcccagtatcccaagaaacctccagtaaggatttgttaataatgtcatatgcatccataaagctttgttattccttctctctattctgagcttgcatgtgtgacatataattggctattctttcagctagtgaactaccgctcgggagggttgcggcttaatccaaatctctatgatagcgggaaagtctgtcttagcctattgaacacttggtctgggcatgggtgtgagaagtggaacccatccaattcaaccatgctgcaggtcctagtctccattcaggccttggtgttgaatgcgaaaccttattttaatgaacctggttatgcagcttctgctaacacaccccagggggagaaaatgtccatggcttataatgaatcgacatttctcctatcctgcagaacaatgctgtattctcttcggaatccaccgaaggtatgactacactacgcttacatgttttccttcctatttgttgtggatatatatgttctattctttttcgcatccaataatctttgttgtcatttctgttgatgaagaatgcctaatcgttaactgtttccattgtaatggtgtaaataatgtgtctgcccgtttggtgaagaagattaatatgctgaattgttgataaagatgggtgtgatgaacctgtattgttttgaatggtctattttgctttgccatgcgttgatgcctgagttccttacataaagctgctgaataatccgggtgcaacttttgcagcattttgaagacttcgcaagggttcatttttgcaagtacgggcgcaatatcctcgtaggatgcaaggcctacatgaatggtgcccaagttggatgccttgcaggaaacggagtgcaggatgttgatgaaggcgacaaaagctgctcagcgaacttcaaaggctccttgaagacgttatttgatgaactcatcaaggaatttacccggataggagttcattgccatgaattccagcctcagagggtgaatcctgggtctaccagagccaaggcggacaccacattgaggctatgataatagtaacgataggtggtcaacatgaggttgacaattttttttttgtttcttggggatcagagatatagttgttggtgctatcctcagaaatcaggaggataggagggcaaaaggcctgcatcagatcatgtccaattatctaaaccatcatgcggttagttggtttttgtgtatatccctgttaaacatgtgggttctattcatctaagaacagtagtttaccacattcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0294300, RefSeq:Os09g0294300