Difference between revisions of "Os09g0296900"

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(Created page with "{{JaponicaGene| GeneName = Os09g0296900| Description = WD40-like domain containing protein| Version = NM_001069337.1 GI:115478413 GeneID:4346650| Length = 7163 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0296900|
 
GeneName = Os09g0296900|

Revision as of 20:56, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0296900

Description

WD40-like domain containing protein

Version

NM_001069337.1 GI:115478413 GeneID:4346650

Length

7163 bp

Definition

Oryza sativa Japonica Group Os09g0296900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7755253..7762415

Sequence Coding Region

7756917..7757032,7757126..7757275,7757395..7757511,7757583..7757667,7757950..7758058
,7758152..7758219,7758313..7758438,7758550..7759637,7759926..7760132
,7760236..7760296,7760563..7760676,7761093..7761206,7761280..7761324

Expression

GEO Profiles:Os09g0296900

Genome Context

<gbrowseImage1> name=NC_008402:7755253..7762415 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7755253..7762415 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttgaaatgactgaaagttggatagaaggctcaaaaaacacttcagctccagaatcagtttcttgttcagtttctagatatgaatcatcaccgccaagaagactggggaaaagaaatatttatcatctattagctcaacgggagatctctcctcggacaaaacaccaagctaaaaatatttggtctggatctccagaatgtgctactggttcaattgagttagcattttgggttacagatgctagacatgatcttttttcttgggctgaatcacaatccttgcatcggtggtctgccaggtattgtcttctcctgcctgctccaaggtcaaccattgcagctgcattcagtccggatgggagaacacttgcatccacacatggtgaccatactgttaaaataatcgattgccaaactgggaaatgtttgaaagtgttgcttggacattggcgcactccatgggtggttagatatcatccattacatcctgatatcgttgctagcggaagtttggataatgaagtttgtctatgggatgctaaaacctcccgttgcattggatcacacttcttctataagcaaattgcatcaattgcatttcatgcaaagggggagcttctggcggttgcttcagggcacaaactgttcatatgggactacaataaacgagatgaagcttctgacccaccaatgatattaagaactcgccgttcactgagagctgttcaatttcatcccaatggggctccgtatctactgactgcagaggttaacaatcttgattctgctgattcagaactgacccatgcaacatcttctggctattcaaactcgccttcggctgtattttttgcaatcatgaactccgcatgttgtccatactctgagtctaggttttcatcaccgtgcttgatctggcctgcatatgtcagagatgatggaagcatatgtctgcttcgcaatgactgggttagtggttcatccgatgtgcagcagccatcagattctgaaactcaacaggctggccatatggttacacctatggatgtatgccctggagaacctggggtgaataattatgatgatgaagattctgcatctttatcaaatagaatagaaatgcatactcccagttggcagaatagctcaagatttcacaacagtagtgctgctactgatcttcacaggattgatataagacaagtttctgacctgagcagtgatacgccaaatccagaaatgcctgcacattcaagaattgatgttccaaatagtatgccaatggatttgttcgccttttcaaatacaatagatgttcaaatgttcctaagagacgtagaggccggacatcaccataataattacactggtggatcacatagctgggaactgccttttctccagggttggttgatggcacaaaaccgtacaggattgcgtgcaacacttcctaacaatgaggttataggagacttacctatcggtggcactgctgggactgataatgtgatgaatgaatcatcaaacatgtacagttttgaacgtgtagggccttcatcatcaattccaattactacggacagtttgagagggctaagtaaacatcgtcatatgctggcctctgtacctggtggagcagggacttcgcttcaaggtgctcaaaatggtgaagctcatgttaatgttgtctcattaggtgttgggtcagaatttgctacgtcactgtttgctggtgacggtactgaattaccctgtacagtgaaacttagaatatggcggcataacattgacaacccttgtgctgtgttagcacctgaggcatgctgcttgacaatctctcatgctgttctttgcagtgaaatgggcacccatttttccccctgtgggcgttttttggtggcttgtgttgcatgcttactgcctcaaacagaagttggtgagcatgtaagccaatcgcctgtacagtatgattcaactggggctggaacatcaccaactcgccaccctctcccctctcgtcgagttatttatgagcttcgtgtttattctcttgaggaggaaacgtttgggacagttcttgtgtcccgggcaataagggcagcccattgcttaacttccattcagttttcacctacatcagagcacatactactggcatatggtcgtcgtcataactcacttctgaggggcattttcatggatggcaagaccacaatccctgtgtacactgtcttggaggtgtatagagtttcagacatggagcttgtaagagttatccctagtgctgaagatgaagtcaatgtcgcatgttttcatccttcccctggtgcaggtcttgtttatgggactaaggaaggaaagctcaggataattcaacacaatgttgcagactactag</cdnaseq>

Protein Sequence

<aaseq>MLEMTESWIEGSKNTSAPESVSCSVSRYESSPPRRLGKRNIYHL LAQREISPRTKHQAKNIWSGSPECATGSIELAFWVTDARHDLFSWAESQSLHRWSARY CLLLPAPRSTIAAAFSPDGRTLASTHGDHTVKIIDCQTGKCLKVLLGHWRTPWVVRYH PLHPDIVASGSLDNEVCLWDAKTSRCIGSHFFYKQIASIAFHAKGELLAVASGHKLFI WDYNKRDEASDPPMILRTRRSLRAVQFHPNGAPYLLTAEVNNLDSADSELTHATSSGY SNSPSAVFFAIMNSACCPYSESRFSSPCLIWPAYVRDDGSICLLRNDWVSGSSDVQQP SDSETQQAGHMVTPMDVCPGEPGVNNYDDEDSASLSNRIEMHTPSWQNSSRFHNSSAA TDLHRIDIRQVSDLSSDTPNPEMPAHSRIDVPNSMPMDLFAFSNTIDVQMFLRDVEAG HHHNNYTGGSHSWELPFLQGWLMAQNRTGLRATLPNNEVIGDLPIGGTAGTDNVMNES SNMYSFERVGPSSSIPITTDSLRGLSKHRHMLASVPGGAGTSLQGAQNGEAHVNVVSL GVGSEFATSLFAGDGTELPCTVKLRIWRHNIDNPCAVLAPEACCLTISHAVLCSEMGT HFSPCGRFLVACVACLLPQTEVGEHVSQSPVQYDSTGAGTSPTRHPLPSRRVIYELRV YSLEEETFGTVLVSRAIRAAHCLTSIQFSPTSEHILLAYGRRHNSLLRGIFMDGKTTI PVYTVLEVYRVSDMELVRVIPSAEDEVNVACFHPSPGAGLVYGTKEGKLRIIQHNVAD Y</aaseq>

Gene Sequence

<dnaseqindica>1665..1780#1874..2023#2143..2259#2331..2415#2698..2806#2900..2967#3061..3186#3298..4385#4674..4880#4984..5044#5311..5424#5841..5954#6028..6072#ccggccaccaaaccggccatttccgcttccctattccgccccccttcctccgctcccaaccgagtccccggcgccgccgccggctacatcctcgccctgcgtcgagggccacggcgccgcgcccaccgcccgtcgcagcgcccccgctgctcggccacggctcgcacgaccgcgcgggtgagagaacagccggcgctgccttggcctcggctcggcggcgcgacgcccccacccactccaggctccacgtatggttcaatcctatgcaacttcttttttttttgttgattcgggaattcatgcctatccttgggtgtcgattgcgcatgtagtttcgaatttggattttgtcagtttttctagaatcgaatttggccatctgtagaatggcgctatgacaatgggtgtctgatgcatgaaccatcctagcgtcgtagtatttggcaagaattgggttcggtgagaagatgtcatgtaaagttggggaaaggaatgccaacgttttgagtttggaggtggggtttctcgttgaggacatatgctcggtgccgtttctggtgacaaaatcctgcatctgatagggagagaacaagatgctccaacccccattcggtttggtttctgcacggtgaactgccgtttgctgttcagaaattttggaggttcctttcaattgaacatccatgtcccatgttaggtcattcctgcttacacgtgcagctaaataggcatagcattatgacctgctatagagttctatgcagatctcaataggtttcccatacccccatcaatattctgattccgtcggtgttgttgatcaatggttctccacattttagttcgtctctcatatgtgcggaccagtatatgtgacggagctattttcctatatatggtaatctgtaggacttataaacttgtgaaagtaagttcgtgtgttatgccttcctaaaattttgcagacattcactctacattgttgttcaaagcttcctctcttaccatgtatgtaaggactccttcaccggtgtataaccaaggataatagttgttgtatattgtttgctacaatcttatcgtagatgtgtataaaatagttttatctcttaaatgttaatgatttgtatgtgccatggtgcatcagtgtttgaatgtatcagaatcaaatgaacttagtacaatgtgaggggcacatttatagatgtgagactatgggactatatgctatgtaaacaaatcattggcagaatatgtattaaacattttagtcttatcaccctaagagtatccttctaactaactgtatatctgagatgtccgctattaaaagcataagtacttctgaaaagcctgcaatgcaaaatgaaaattcaattgctatttgcttttttaatcacatgaaattagaaactatttactgaactccttgcaatatgttctcatatggaacagtatttaacgccttctgtttgaactatgaaatgtttgtatgcttttgtaagcacacttttggtgtaactgtggaaattcgatgtatggtccaatccaactgtatcaaatttgctttattttatatggcatcgcgttaaaaaaattaacagattagagttgtatctatttttaattcattttgttaatttacaataggtgaggaatttttaatgcttgaaatgactgaaagttggatagaaggctcaaaaaacacttcagctccagaatcagtttcttgttcagtttctagatatgaatcatcaccgccaagaagactggggaaaaggtaattaaatgctaatgtaccattattttttatttattttaggttgtggggcatgatgtagagtgtgacttttattttctttactatccccagaaatatttatcatctattagctcaacgggagatctctcctcggacaaaacaccaagctaaaaatatttggtctggatctccagaatgtgctactggttcaattgagttagcattttgggttacagatgctagacatgatcttttttcttggtaaggcagatttcttttttaaccaagatgagtactttatatttaaagataaacttgaaccgttgattttactactactatctgattgagcatgcatcctaaaccttacctttttacagggctgaatcacaatccttgcatcggtggtctgccaggtattgtcttctcctgcctgctccaaggtcaaccattgcagctgcattcagtccggatgggagaacacttgcatccacacagtaagctaaaggatatgctgaatatatgttctgaacggaaaaaaacttagactaactacacttttctctagtggtgaccatactgttaaaataatcgattgccaaactgggaaatgtttgaaagtgttgcttggacattggcgcactccatgggtggtatgtctattaaaactggcaattgtttttcctagtgtacttcattttctgagatgctctttaagcacttctaaaagaattaacactaatactagtttggtttttagtgtttccttaacgatcacttgcttaaataacaacagtttgttatctatgtgtccttgctgttttccccctatgtacaaactgttaattcagaaaaatgttttacaaaaaaaaacaatgttgaattttgtttcacttttttattacttgccataagaaattattgttgcaatgtaggttagatatcatccattacatcctgatatcgttgctagcggaagtttggataatgaagtttgtctatgggatgctaaaacctcccgttgcattggatcacacttcttctgtaatatctcttaatggactcattgtttttcttctctattcgtgagcatttctaaagcaacaattgtaattattttttacattatgttggcagataagcaaattgcatcaattgcatttcatgcaaagggggagcttctggcggttgcttcagggcacaaagtgagatgtttaaacaaatgaactttctatggatcgttctgatctgtacttcatcagtaactgttaaagtttaaattttgaaatacatttcagctgttcatatgggactacaataaacgagatgaagcttctgacccaccaatgatattaagaactcgccgttcactgagagctgttcaatttcatcccaatggggctccgtatctactgactgcagaggtagaatttgtctctctgaattgatgatttatttatattagttttctaattttctccgtgtctccctgtcctagtgttgatgtttaatctcaccccaaggttcacttgcaggttaacaatcttgattctgctgattcagaactgacccatgcaacatcttctggctattcaaactcgccttcggctgtattttttgcaatcatgaactccgcatgttgtccatactctgagtctaggttttcatcaccgtgcttgatctggcctgcatatgtcagagatgatggaagcatatgtctgcttcgcaatgactgggttagtggttcatccgatgtgcagcagccatcagattctgaaactcaacaggctggccatatggttacacctatggatgtatgccctggagaacctggggtgaataattatgatgatgaagattctgcatctttatcaaatagaatagaaatgcatactcccagttggcagaatagctcaagatttcacaacagtagtgctgctactgatcttcacaggattgatataagacaagtttctgacctgagcagtgatacgccaaatccagaaatgcctgcacattcaagaattgatgttccaaatagtatgccaatggatttgttcgccttttcaaatacaatagatgttcaaatgttcctaagagacgtagaggccggacatcaccataataattacactggtggatcacatagctgggaactgccttttctccagggttggttgatggcacaaaaccgtacaggattgcgtgcaacacttcctaacaatgaggttataggagacttacctatcggtggcactgctgggactgataatgtgatgaatgaatcatcaaacatgtacagttttgaacgtgtagggccttcatcatcaattccaattactacggacagtttgagagggctaagtaaacatcgtcatatgctggcctctgtacctggtggagcagggacttcgcttcaaggtgctcaaaatggtgaagctcatgttaatgttgtctcattaggtgttgggtcagaatttgctacgtcactgtttgctggtgacggtactgaattaccctgtacagtgaaacttagaatatggcggcataacattgacaacccttgtgctgtgttagcacctgaggcatgctgcttgacaatctctcatgctgttctttgcaggtacactttggcattcctcctctttcctctgctttattgtgtagtacaaattgccaatcttttcctgttgttatttgctaatgattttgatgtattaaactaaaaatcgttgctattttcttgtgctagtggtaggcagcaacaaccatgtgacagtaactaataaaacaattaatgcacaaatgtatatttatctgaattggtgcatttgagttgcgcttttatcatggttgataaattttgtgctgctgctgagatttgagactctgaacttattaattgctgcagtgaaatgggcacccatttttccccctgtgggcgttttttggtggcttgtgttgcatgcttactgcctcaaacagaagttggtgagcatgtaagccaatcgcctgtacagtatgattcaactggggctggaacatcaccaactcgccaccctctcccctctcgtcgagttatttatgagcttcgtgtttattctcttgaggaggaaacgtatgttttctcgatgctattttttttattatttgatttttatctgccagtgtctgtaaattgactagtgaagtcatttattgcttttgtgatttccttgtaggtttgggacagttcttgtgtcccgggcaataagggcagcccattgcttaacttccattcaggttattttctttccaattttttttgtaggtgtgaccattaatacttttgaggtagttgtgtacttgcttgtgtgaggcggcaaatatgagtttccgcagtcacttccattctgagagcattaacactttgtatcgaacttaagtgtgttcagtgaagacgtgttctctaacccttttggtggacaattctgtagttctgatcatttaattttggactgatgtgatatgaaatctgttctgcatgatgatatttttattcgctgcagttttcacctacatcagagcacatactactggcatatggtcgtcgtcataactcacttctgaggggcattttcatggatggcaagaccacaatccctgtgtacactgtcttggaggtagatatgatttacaacttaacattaaacattttacaggaaggctgatacagatgctctcatgatacttgtttctgtgttttgtattggatgtaatatacttcttgttttttactctactacacataagtttgacaaagcttaattgtgaccactagcttctattgtaattctttttgtaggacttaataaaattataatatcgtgaaaatatatttttcatatgaacgaagtattaccattgtgttataaatctaatctgaacattgctaaagatattattagttgacgttaaaatagtttataatggaaccaaactgtggggttacgatttatgtgcagtaatgactaatgacctcatactttcaggatataaggctatgggctaatactatttctttattgcacttccataggtgtatagagtttcagacatggagcttgtaagagttatccctagtgctgaagatgaagtcaatgtcgcatgttttcatccttcccctggtgcaggtcttgtttatgggactaaggtgagtgacaagttaggtcaatatcaaagatggaatgaatattggtatatctgatgcttatgttgaatcacaggaaggaaagctcaggataattcaacacaatgttgcagactactaggggaaatattcttgaggtactacttacccgttatttacttttaggtctttaatgtgctcaaactggtacctagtctgccaagcataagcagaatttttttttttttggtattgtcctgaatacaagtttgagataccgtgcatttggtcttgatcgaaccgtttaacatcgtttattttttgaagcacactgccaatcgtattaatagaaaatggactggctttcagatttttagagaggatcaacccttttggcttgagcttccttgtgtccaaattccaatctacctttgctgggggtctcgctcattctagataattctaaggctacagatggtgttttatattaatcatttttctgtataatgtgaggttctggtattcaacttttccattactggtaatgaattcatactgagctaggatccactagggttcaatgcttaagaaaatgttgtgccgaggattctaatctattgtttgattggtatagccagttaggccagtttgattggttctacttctgagtgaacccaatgctaattcttttcgcaggaacttatctccacagattcatatgcccaatgaatcatatcccatcccagctaaatcatggtggtcaattttgaaggaccaacatgcagatgttcgccttcctgagtaatccacaacatgattgcactgagactccggaaaacattttgtgacgatcatgaagacttcgctctgcacctaggtaacagtgacgcgggtaagaactaagaagcaagctgtgagagaacagtcaaggaaaccgctcccggtggcagcatatgtgactaagttagtggttgactaatttcattgctagaggtagagcaggaggatgctggtgtattgatgctgccttagccagaaaatggggtagcagatgaaatctagcaattggcatacatgtcaatgtgtcatgttgctctgcatgacgttgtcctaatggactgtaacaatgggatgttgctgcaatcagaagcacatacgctcttattaacatgatttgctgttatgcaaatcttttttctgccggtatatggactggggttggtgtatgttggg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0296900, RefSeq:Os09g0296900