Difference between revisions of "Os09g0387000"

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(Created page with "{{JaponicaGene| GeneName = Os09g0387000| Description = Conserved hypothetical protein| Version = NM_001188888.1 GI:297726906 GeneID:9269780| Length = 5620 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0387000|
 
GeneName = Os09g0387000|

Revision as of 20:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0387000

Description

Conserved hypothetical protein

Version

NM_001188888.1 GI:297726906 GeneID:9269780

Length

5620 bp

Definition

Oryza sativa Japonica Group Os09g0387000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13820850..13826469

Sequence Coding Region

13820850..13820900,13821937..13821991,13822030..13822106,13822541..13822609,13823153..13823260
,13823473..13823507,13823775..13823893,13824363..13824375,13825446..13826469

Expression

GEO Profiles:Os09g0387000

Genome Context

<gbrowseImage1> name=NC_008402:13820850..13826469 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:13820850..13826469 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagcttgccacagttgcggcgggcgtcgtcttgtgccggcttgtggttgccggcggcgccgccctaggtgcctctgcgagcgccaccctcggcgcgtcttcgcgcacaccgcagctgcacgcctccgcgcgccttgcgctgcttgcagccgctcgtcgaggaggaggactcccattttctcccgtcaccctggctagcctcccactgctcccgagtgagatggagcttcccaccaatggtgataggccccgagagtggctatggctcatcgccttcgacgaccttgaggcgacctatcgcctcctctatcgacatcgtggagaggtccagcagagactcgatcgagcgagcgatctgcctatacttctctgggacgcaacggaggagcttctcgacggctctctccttgtcgtaggtgtcgtcgccgtactgcaccatcttctgcaaaagagtgttgagacggagggcaaagtcatcaacatcctcacctggcttgaaggccatgttctcccactccttgcggagtgcctgcagtgtggacttgcgagcgcggtcgctaccgatgcatgccgcagcgatggcgtcctaggcctccttggcagtccgcttctgggaaagcgagaactgcatctcgggcgggactgcagcaatgagggcatcccgcgcccgtcgatcctcgtcgtagtcgacgtcgccgtaccgaactgcctcccacatgtgccgcacctggagcctcaccctcatgaccgcagcccactcgacgtaggttgtcttggtgagggtaggccacccaccgccggggccgacttccctgatgacggcctgaaacccgtggtgtccacggtatcggtccggggagggagaaacgcgccgcctgtaacgaccgcgatctccgtcgacccaaccgttgccaccgagagcaccgccgtcatgcgcacccctgctagggggtccactgacgcgtccaagctcgtctgggctgccgccgccgcgcgcgctcccgccaggtacaccgccggttcaagtgaaaaggctgatgactggaggtgtgattctgcttgtcggttgagggaagaattcacaggcctgtgttcactgaggatatcttctcaacctattgtttccaccgatcatcgatctttaatgctagacttcctcagacccatgtgctttgtgaatacgaaggcagtggtcttttggtcttatttcttggtctcttcttttcatgctcatcagaactgggagagacaggatgttttaggggttttccaagtctctgaaatggagcagcaggtgtggtattatcatgggtatctagaaatgatcagcttctgctttgcttatgtacgcagccagagaaatatcttgtttcttcagataagaatatcattgttgctgcatggtttgtgtgacctgattagtatgttcttcgactcatggttcttcattcgttacatgatattgccctgttctaagcatggtatacaaggcaagccattcggtgggatactggattcatgggtctcctggcatggaagaagctag</cdnaseq>

Protein Sequence

<aaseq>MAKLATVAAGVVLCRLVVAGGAALGASASATLGASSRTPQLHAS ARLALLAAARRGGGLPFSPVTLASLPLLPSEMELPTNGDRPREWLWLIAFDDLEATYR LLYRHRGEVQQRLDRASDLPILLWDATEELLDGSLLVVGVVAVLHHLLQKSVETEGKV INILTWLEGHVLPLLAECLQCGLASAVATDACRSDGVLGLLGSPLLGKRELHLGRDCS NEGIPRPSILVVVDVAVPNCLPHVPHLEPHPHDRSPLDVGCLGEGRPPTAGADFPDDG LKPVVSTVSVRGGRNAPPVTTAISVDPTVATESTAVMRTPARGSTDASKLVWAAAAAR APARYTAGSSEKADDWRCDSACRLREEFTGLCSLRISSQPIVSTDHRSLMLDFLRPMC FVNTKAVVFWSYFLVSSFHAHQNWERQDVLGVFQVSEMEQQVWYYHGYLEMISFCFAY VRSQRNILFLQIRISLLLHGLCDLISMFFDSWFFIRYMILPCSKHGIQGKPFGGILDS WVSWHGRS</aaseq>

Gene Sequence

<dnaseqindica>5570..5620#4479..4533#4364..4440#3861..3929#3210..3317#2963..2997#2577..2695#2095..2107#1..1024#atggccaagcttgccacagttgcggcgggcgtcgtcttgtgccggcttgtggttgccggcggcgccgccctaggtgcctctgcgagcgccaccctcggcgcgtcttcgcgcacaccgcagctgcacgcctccgcgcgccttgcgctgcttgcagccgctcgtcgaggaggaggactcccattttctcccgtcaccctggctagcctcccactgctcccgagtgagatggagcttcccaccaatggtgataggccccgagagtggctatggctcatcgccttcgacgaccttgaggcgacctatcgcctcctctatcgacatcgtggagaggtccagcagagactcgatcgagcgagcgatctgcctatacttctctgggacgcaacggaggagcttctcgacggctctctccttgtcgtaggtgtcgtcgccgtactgcaccatcttctgcaaaagagtgttgagacggagggcaaagtcatcaacatcctcacctggcttgaaggccatgttctcccactccttgcggagtgcctgcagtgtggacttgcgagcgcggtcgctaccgatgcatgccgcagcgatggcgtcctaggcctccttggcagtccgcttctgggaaagcgagaactgcatctcgggcgggactgcagcaatgagggcatcccgcgcccgtcgatcctcgtcgtagtcgacgtcgccgtaccgaactgcctcccacatgtgccgcacctggagcctcaccctcatgaccgcagcccactcgacgtaggttgtcttggtgagggtaggccacccaccgccggggccgacttccctgatgacggcctgaaacccgtggtgtccacggtatcggtccggggagggagaaacgcgccgcctgtaacgaccgcgatctccgtcgacccaaccgttgccaccgagagcaccgccgtcatgcgcacccctgctagggggtccactgacgcgtccaagctcgtctgggctgccgccgccgcgcgcgctcccgccaggtacaccgccggtgcgtccacgcccggctgggctgccgccaccgcgcgcgtgggggtgcgcggctgcccactgctccgcccgctcacgagctgcctccctcatcagctcatcagcggggatgttgtaggcggagacagagctgctggagctactatcgcgcagagccttgagctctgtcgccgctgccgctgcttccacttccacccttgccgccgccagccttgacgcccttgctgccatcgcagacatggcacgctactggggggctgctgcgtggagaagaggctgcctctgacgagctgctgctcatcagtgcaggggaggaaggatgagcaggaacagccggtgttcctgcttctggctgaggacagagaggaactcgggaaggggatgagcaagagatgtctaggctatatgatagaatggctctgatgccagatgttagtagcaaaatctttactctcattgagaggatggcgctaggagagttggggcaattttgtctattttcttataaaagccataccatcccgggggaggttggatacatatttatagccatagctggctggctacaggctactctaaaaaatgagcgggatgctatcctagagagcatccaaactgaaagcataaagcatgctgtcctaaagagcatccaaactgaaattataaagcaaaaactgaaaaatgctgtcctaataggaatatatgttgtcctaaaaggagaaaacaacctaaaagtaaaagaaggaccacagagaccaaagaccaacagcacaaggacgcacaaggacttattctatcagaagagagggtggagttgcaaacataaaccacgtatgtaccttttgtcaggcttgattaatttgctttcagatgaaagcaattcattgctgcactactccttgaattgagggttccgatgcctagaaaacaacatcctctgcagatgtttaaggctgtatagaggaaattaaattaagatggtatcatccttattcttccatctctcactggttgcctactaatatccttgtcaatgttgctatcatgacaaatatattttcttggtttcaggttcaagtgaaaagtatgcttaggcggaggatagtagtgcgaaaagttggacattcatcaattccatcactgattgtgtttatttgattattccttcacatactctttttttttgggggagggaaccaactggtggtgctctttcttctttgtccttatataagagagaaatggtacagttgctttggtgtctcactaatttgatatagttggggtccaccccgcctgcttaaccggggagccatccaacctggatctttggattaattgcacattctcaaagtacaagtattttagttctatagactgaatcacagtattgttttttccaccgcttttgcatatccgatttaagttttttttggtacattttcatggtagaaagaaaccagcgtgtaagctctgtggcattgcactccaggtgtttctggttttgccttatgtaatagtttgaattttgctttgtggtatggtgcttgcagggctgatgactggaggtgtgattctgcttgtcggttgagggaagaattcacaggcctgtgttcactgaggatatcttctcaacctattgtttccaccgatcatcgatctttaatgctaggtgagcttcctgtgtacctgtatttcatgtggttagctctcaagcaaagtggagtttgttttttgttcttctatactgtaataaaaagtgccttatcttattttaatttggttttgggtaatttaatcttgagaacgaaatgtgttgcgatatgactcacttgagaaattcatgtagttcaaaagtatacatgtgattgtatgattttcgccgttctatatgaaatgttttctacatctttgaatttatcaaacccatgtttttaagacttcctcagacccatgtgctttgtgaatacgaaggtacacttattgaactgggtgtatgaaataggtggctgcccatatctgaaattatactgaaaaatgaattaaataatcacgcatgtcatatcccaaacaaaaaaactgtggcgcgccttcacagctttttttgttgaagctgtgaagaacccttgactttccatccaacgatgattccttaattgagtttgctttcctccatttcttgccaggcagtggtcttttggtcttatttcttggtctcttcttttcatgctcatcagaactgggagagacaggatgttttaggggttttccaagtctctgaaatggagcagcaggtgcatctagcttaggtaaagactctgaatcaagcaatttgattgctgggcggttctgtgcaatctgctttagtgactgagcaactctagcaatgctggaagcttccatggctttttcagtttatcccgcagaatcatcttgtctatgagaaggttcaggtgcttccacacgtttcatacatggtgtgctatttttttgttggttatatcgctttttagtacccaggctatgaaacaaggccagctgttgttatctattgaagcacacccttgtgcaaattctgtccatgatccgggtcaaagagtactggctgttcctgcaagagcaggagcatttgttgttatctgtcgagacacatgcctctgcggtctttttccctggtgtgggtgacgtggtggatcctgttaatgcaggaggcggtgccctgatatttttttttttacactttttgattcaaggaaaaggctatgcatgcaggccttatgatttgttcgtttttatgcccaagtatctcagttaaagctattaccatgcccatgcaggtgtggtattatcatgggtatctagaaatgatcagcttctgctttgcttatgtacgcagccagagaaatgtatgtgcctgcttatagctgctgtttaatacgattgcgattgcaggataccctagtggttagggtgctgcctcttgttgctctcttttatttgtcccattagacctatcatgctcataggtgtttaccatttcccttcaatttgccttgagaataattggtccatgtttacattgtccttcgttcgcttttggtcctgtctaggcgacgaatgattttcgctgttaatgttttagagttattttttttattttgcctagcggtgaaaaaaaattgccttggtatgatgaaaactggatttgttacacgctattgttatggattatgggctattcttttagttcaattatgtcttccgtgtttatcatggcttactctcatgctctttttcctccattcatcagttattgattcttcttttgtgctgtctgtagatcttgtttcttcagataagaatatcattgttgctgcatggtttgtgtgacctgattagtatgttcttcgactcatggtacgttactgatctttttgttataccatattgtgcaggttcttcattcgttacatgatattgccctgttctaagcatggtatacaaggcaaggtgaagcttagaaagtgatatatcgcctttggtgaaatatcgattacgttttagagatctgtttttgttagtggttgcaacgttggttgccctccaaaaacatatacaggggtatagtccaataggtttttttttttcttggggatgcatgtagttaagcctgggatttttaggttgctcatcttccttgcgtgctgatcatgtactggttcagacaggttctggcctgagatggagattgttgaattaagatcagtatggttgtgtttgttaggtcacctttacatggtaggtcatggatatgatatgcggttgcagatctgttctattattgttattgttgccagagataactgcgttcgttgtaccatcgtcaccatagatggctgttcgggtgattgatcaagtccgtacttctttgttctcatcgctgcttggtgctcagtatttggtgcttgtgaggaggttacatttttccatgctttacttccactgcacatgttgatctagcaatacattatagggtatagggatatagttatttcccatatagcgggaattatctaccggttgattggtatttaggtggccatggttgatcagggtatgtgcatatagatcttagagatatgaaaatttcccttggctgaagcatcggctgaatgatttttgttatgaggtgtacaggatttatttggctgttgagggctccatcctactgcgaattaaacggatataatagcatgttttatttaatctagatggacggaaaaacattgtgcatggaccttttaattaagggctacattgggattgctttcttgccgcttgttttagacgccccttcaatgaatcacacaattgttggcctcgttaaatttcgtttcgtgttgttttaatggttctaatctttttcgcttttattttggttctgttcatgttgcaatgctatcagtcgatatgttttcgttatatatgacctgtttatgcctttccctttgcggatattcatgctttcttgtgatttgctgtgcagccattcggtgggatactggattcatgggtctcctggcatggaagaagctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0387000, RefSeq:Os09g0387000