Difference between revisions of "Os09g0397900"

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(Created page with "{{JaponicaGene| GeneName = Os09g0397900| Description = Similar to FEG protein| Version = NM_001069642.1 GI:115479026 GeneID:4346985| Length = 5431 bp| Definition = Oryza ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0397900|
 
GeneName = Os09g0397900|

Revision as of 20:58, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0397900

Description

Similar to FEG protein

Version

NM_001069642.1 GI:115479026 GeneID:4346985

Length

5431 bp

Definition

Oryza sativa Japonica Group Os09g0397900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14545533..14550963

Sequence Coding Region

14545619..14545643,14545726..14545912,14546017..14546089,14546526..14546643,14546761..14546834
,14546956..14547092,14547624..14547687,14548055..14548120,14548423..14548492
,14548568..14548672,14549202..14549343,14549705..14549801,14550301..14550822

Expression

GEO Profiles:Os09g0397900

Genome Context

<gbrowseImage1> name=NC_008402:14545533..14550963 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14545533..14550963 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatcgagtgcctcgtgctaggggcggggcaggaggtggggaagagctgcgtggtggtcaccttcggcggcgggaagcgcgtcatgttcgactgcggcatgcacatgggccaccgcgacagccgccgctacccggacttcgaccgcctcctcgccgacggcgccgccgactacaccgccgccatctcctgcgtcgtcatcacccacttccatttggatcatatcggagcactgccgtacttcaccgaggtctgcggttaccacggtccagtttacatgacgtacccgacaaaggctttagctccattgatgctggaagactatcggaaagtaatggtagatcatagaggagaggaagagcaatatagctatgaagacatcctacgctgtatgaggaaagttataccattggacctgaagcagaccattcaagtagataaggacctttcgatccgtgcctattatgctggacatgttctaggggctgcaatgatatatgcaaaagttggagatgctgctattgtgtacactggagattacaatatgacaccagataggcaccttggagcagcgcaaattgatcgtctgaagttagatctgttgataacagaatcaacatatgctaaaactgtgcgtgactcgaagcatgcccgagagagggagttcttaaaagcagtccataagtgtgtttctggaggtggtaaagttctaattccagcatttgctcttggaagagcacaggagctatgcatactactggatgactattgggaaaggatgaacctgaagattcctatttatttctcagctggtttaaccattcaagccaacatgtactacaaaatgcttattggatggactagccaaaagatcaagaacagctacacagttcataacccatttgacttcaagcatgtttgccactttgagcgttctttcattaacaatcctggtccatgtgtgctttttgcaacacctggtatgattagtggtggattttcccttgaagtgtttaagaaatgggctccatcagaaaaaaatctggttacacttcctggatattgtgttgctggaaccattggccataagttgatgtctggaaaacctaccaggattgacatagacaaggacacccatattgatgtcagatgtcagatccatcaactgtcattcagtcctcatacagactcaaaggggatcatggatcttactgaatttctttctcccagtcatgtaattctagttcatggcgaaaaacctcagatggctttcttgaaggagcggatcgaatccgagttggggatgcaatgctgttacccagctaacaacgagaccgtctctattccgacatcccagaacttgaaaataaacgccacggagaagttcattgtgagcttctgcatggatgaaactgaaaatgatccgcagaagcagaacctgaattttggtggcgacatgccacaaggctgcaggactgaaggagtagctgagggcgttcttctgatggagaagtccaagactccgaagattttgcgcgaggacgagctgcttcactcgctgggcatggaaacgcattttgtccattttgaaccactgcatccgtccagcattgaggtaaaacatactggtgagtccgcggtgcagcagagcagtttagaacatttagactgcgagtga</cdnaseq>

Protein Sequence

<aaseq>MAIECLVLGAGQEVGKSCVVVTFGGGKRVMFDCGMHMGHRDSRR YPDFDRLLADGAADYTAAISCVVITHFHLDHIGALPYFTEVCGYHGPVYMTYPTKALA PLMLEDYRKVMVDHRGEEEQYSYEDILRCMRKVIPLDLKQTIQVDKDLSIRAYYAGHV LGAAMIYAKVGDAAIVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYAKTVRDSKHA REREFLKAVHKCVSGGGKVLIPAFALGRAQELCILLDDYWERMNLKIPIYFSAGLTIQ ANMYYKMLIGWTSQKIKNSYTVHNPFDFKHVCHFERSFINNPGPCVLFATPGMISGGF SLEVFKKWAPSEKNLVTLPGYCVAGTIGHKLMSGKPTRIDIDKDTHIDVRCQIHQLSF SPHTDSKGIMDLTEFLSPSHVILVHGEKPQMAFLKERIESELGMQCCYPANNETVSIP TSQNLKINATEKFIVSFCMDETENDPQKQNLNFGGDMPQGCRTEGVAEGVLLMEKSKT PKILREDELLHSLGMETHFVHFEPLHPSSIEVKHTGESAVQQSSLEHLDCE</aaseq>

Gene Sequence

<dnaseqindica>87..111#194..380#485..557#994..1111#1229..1302#1424..1560#2092..2155#2523..2588#2891..2960#3036..3140#3670..3811#4173..4269#4769..5290#ggagaggcaacggaggcgtggttgagggattccggcgtggagcggcgccgggagaggggagaagcggcggcggcggcggcggcggcatggccatcgagtgcctcgtgctaggtacccttcgtcctcctcgagttcctcttctcgcacgggttgattgatgggaaccacgcgtggattgatggcgatggcgcaggggcggggcaggaggtggggaagagctgcgtggtggtcaccttcggcggcgggaagcgcgtcatgttcgactgcggcatgcacatgggccaccgcgacagccgccgctacccggacttcgaccgcctcctcgccgacggcgccgccgactacaccgccgccatctcctgcgtcgtcatcacccacttgtgcgtctgccaaaaatcgaattgaattgaatcgaatttgatctgtagcagcatatccagtttgcttgcacggttaatagctttgtgaagtttgtgcgttgcagccatttggatcatatcggagcactgccgtacttcaccgaggtctgcggttaccacggtccagtttacatgacggtgagttgtaaccactaaccagttcatgtttatttgttcagtattatgattgcgcagctttggtgtatccgttccaggtagaatggggtttcattaaaaaaaaaggggctatagtgaggttgaatttcaaattaacttgtcataggttggatttttattcatcttagctatcaaatactaatatccattgagcttgtgagttgtggctgtcactgcagtacttaatagtggtcatggtcctgcgtaaatatgtttgatggtctaggggttcagtgaacttgttgatcttattgagatgatcttgtcaaagtatataatacgcaaaaggagatgtgctgtgaactgatattgtccatcggtagcatgtgaaagcttgatttctcttgctgagtgattgatcttcatctcataacttaaatcgttgtacctcaagcagtacccgacaaaggctttagctccattgatgctggaagactatcggaaagtaatggtagatcatagaggagaggaagagcaatatagctatgaagacatcctacgctgtatgaggaaaggtaaatgttctgtgttcacttttcacatatcttttactagtctacttagatattgtgctggcacacaggtatgcatgtacgatagttctcatttggttatttcattggacatttcagttataccattggacctgaagcagaccattcaagtagataaggacctttcgatccgtgcctattatgctggacatgtatgtgctgtatacttttctgtcccatattaactgcagtgttattttttaaattcttggaaaattaatattaatgttgttctgtactttcttaattagtcatcattcttccacatgcaaggttctaggggctgcaatgatatatgcaaaagttggagatgctgctattgtgtacactggagattacaatatgacaccagataggcaccttggagcagcgcaaattgatcgtctgaagttagatctgttgataacagagtatgctacaaattcaaattatagttatgctcttgtgcatcatgttttccttttgaaatgttgacccagtgatgtagttgtagacttgtagtgaatcattgccactcaggattaggttctttggtatgttttagcagtaattttgctgtcttgtttcttatagctcttttatcttttgtgtgcgcttgcgcgcgtgcttgtgtgtccattaactatctttatgatatcaggttttccacacagctacgtaccagtaaaccagtatccggtttctgttgttaacctctgctttgacctgtatgtagttggaaatctcctttgtagttaatgattaggtaggtgtattttgctaaatttttcttgtgatgtttcgttttaatataatccatatttggtttttatggaattatggtctaccttgttctgtactgttgtcttaatgttttaccaatacggaatttgaggtgcagttctttggtgtatctgttttatgttcaatgtgtaagtattaaactgaagttttatctgcagatcaacatatgctaaaactgtgcgtgactcgaagcatgcccgagagagggagttcttaaaagcagtatgaaacctgaaccttcacactaccaattttattggggctttttttatttggtttcttttgtaacacttatgcaatccccttggtgatgcaagatatgtgttacatttatcgatgctgatggttgggcttgtagcattgtgcaaacttaagtagttttgtacatttctatggcatgaatacctccagggagttcatgctcacaaaatactaagtacaacttgttattagccaagagtttatccctttttcaagttctgatacttgaatcatgttgattgtgttgacacattgaatctttataatctttacttgcaaatttctacttagtaaattcatcactttaatgagagcgtattttatctaggtccataagtgtgtttctggaggtggtaaagttctaattccagcatttgctcttggaagagcacaggtactcaccactcctctcttaattatatgtgatgatgcatttaatttaatggttaagagtaggatccttttggaaaaatgtcctttggagtatgctgtttgaaacttccataatcagaagtgatacactgctgtaatgtggaaaacaaattaagattgccttgaaactccgaaaggggcaaaatatagatgtagctatgaacagagtggcattttattgaacgcaatctccatagtgatattttatcaaagcctactttgtggagtggcatattaccaattttctcctctaatgtgtgtcaggagctatgcatactactggatgactattgggaaaggatgaacctgaagattcctatttatttctcagctggtatgtgtctttgtccaactttaacttgctttcatgtatttgtccactttatttattgttgtatttgtttgataggtttaaccattcaagccaacatgtactacaaaatgcttattggatggactagccaaaagatcaagaacagctacacagttcataacccatttgacttcaagcatggtatgtccttgaataaacatttcatttgaatcatatgtcgaatttcgtagagtgtatctgtttagggaaaacttataaacctgcagtatgttttccttttatttgtatataagaaactatgtggcatgcattcatgatgcaccttctttaatgagtgttgataatactgatattgaagatatatgccattggctcctacattgtactccctccgtcccagaatataagaagttttaaagttggacatggttattaaaaaagtaggtaaaagtgaatggtagagggttgtgattggatgagtagtagaggtaggtgggaaatgtgaatggtggagggttgtgattggttgggaagagattgttgatggagaagttgttatattttgggacaaatcctgatggctaaaaattgttatattttgggacggagggagtatctcttaaattagagttctaatgcacatcatttatgtttctgactttctgttatgtacagacagtactgaatattttttttcctcacgttgcagtttgccactttgagcgttctttcattaacaatcctggtccatgtgtgctttttgcaacacctggtatgattagtggtggattttcccttgaagtgtttaagaaatgggctccatcagaaaaaaatctggttacacttcctgggtattcctcttaactcttgtaatttattctttcttctatattttataatgttgtaagacattatatgtttgcttgctgaataaaatatttctgttggtactggagaagcctaatcagccttctggattccttggacaatttgacataaaagatggtgtttgcttggagttgaatgcttctttatcattcatatatgcatttttctgcttcaattgtgacttgtgatcaaattattattttttctcgtcctgtactaaaagatgaacaggaggaaaaaggaaaatttgactgctttcttaaaatttttatgcagtcatctttgtgttttttatatgaccttactttgttgttttcaatgtagatattgtgttgctggaaccattggccataagttgatgtctggaaaacctaccaggattgacatagacaaggacacccatattgatgtcagatgtcaggttgctccacttaatttttacttttgtgtaaaatgttgttttcatggatcaaggacgcaacaaacaactggttgcaagaagttgcacacttactgattactgtcggtggctatacgttctagtgttctgcttagtgcttaccatagaaattatatggtgccttgaatattatcctgacctttgtttatacaccttatatcataactaaagctaccttagtgctttattaaatgtccactattgtttagatcttgcttaaagtcagttctttcacctctgtttatcgtgcaatacgacttctcaaatttctgaattttactatattcaagttttagaatatttagctctagagtgaaaaacataatattagcaactttagatcctttaacatcttaaaattttcattttgcccctttgattatcttgcctacctgttcaagttcctattactaacctttgtatttctttactatactaagtttccctctttgtgcaacagatccatcaactgtcattcagtcctcatacagactcaaaggggatcatggatcttactgaatttctttctcccagtcatgtaattctagttcatggcgaaaaacctcagatggctttcttgaaggagcggatcgaatccgagttggggatgcaatgctgttacccagctaacaacgagaccgtctctattccgacatcccagaacttgaaaataaacgccacggagaagttcattgtgagcttctgcatggatgaaactgaaaatgatccgcagaagcagaacctgaattttggtggcgacatgccacaaggctgcaggactgaaggagtagctgagggcgttcttctgatggagaagtccaagactccgaagattttgcgcgaggacgagctgcttcactcgctgggcatggaaacgcattttgtccattttgaaccactgcatccgtccagcattgaggtaaaacatactggtgagtccgcggtgcagcagagcagtttagaacatttagactgcgagtgaaatgaatgaacaattcttcttttcaactactctcgactttggagacttttgagaggtatagccagaaggggaagagttgtgtagttagactgttggaaaaaaagaacacttttcatccgtcaattgttattttggtggatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0397900, RefSeq:Os09g0397900