Difference between revisions of "Os09g0438400"
(Created page with "{{JaponicaGene|
GeneName = Os09g0438400|
Description = Similar to Choline kinase alpha (EC 2.7.1.32) (CK) (CHETK-alpha). Splice isoform 3|
Version = NM_001069804.1 GI:11547...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0438400| | GeneName = Os09g0438400| | ||
Revision as of 20:59, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0438400 |
|---|---|
| Description |
Similar to Choline kinase alpha (EC 2.7.1.32) (CK) (CHETK-alpha). Splice isoform 3 |
| Version |
NM_001069804.1 GI:115479350 GeneID:4347160 |
| Length |
3858 bp |
| Definition |
Oryza sativa Japonica Group Os09g0438400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:16878880..16882737 |
| Sequence Coding Region |
16878880..16879050,16879296..16879387,16879724..16879916,16880291..16880396,16880655..16880777 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:16878880..16882737 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:16878880..16882737 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggatcggaggggcggagctggagcggggcggcggcggtggggggcggcgtggaaggggaggcggcgatcgcggcggtggtggcgcctgcgccgggggacgtgccggcgtcgggcgcgtccgtggacatagcgctgccgctcccggagatgacgccccgcatcatgcgaaggtatctgcaaggaattggtgagggggtggtcatcgctggacagctcgcgcttctcgatcgagacggtgtctggcggcatcacgaatatgtaaaattatataaccttctgtcactgaaaatactaccaatttaccaaaaacttagtggaaaccacaactgtaatttactgcttgcagtgctgaaggtgtccgcagaagatggcaagggtaacaagtcttctgtgacagttcgtttgtatggcccaaatacagacttggtgattgatcggaagagggaattgcaggctataccacatctctcagctgcagggtttggggctcagctacttggaacatttgaaaatggaatggtccagtcattcatctatgcacgaacattaactccttcagacatgaaggaacctagaatagcagctgagattgccaaagagattcgcagattccatcaagttgatataccaggatcaaaagaaccacagctatgggatgatatattcaagttcatgaaaaaagcttcgatattggagtttgaggataaggagaagcagaagagatatgaaacaatctcttttagaaaaatacaagatgaagttaaagaacttaagaaaagctctacttcattgatttcgagtatgggtcgtacagctaccgtggttatgatattgcaaaccatttcaatgaatatgcaggctatgattgcgactatagcttgtatccagataaaaattctcaataccacttcttcaggaactatcttcaacctgataggccaagtccaactgcaagatctggatgccctttatgtggaaacaaacacctatagattagcatcacacatttactgggcgttgtgggctcttattcaggcaaaggtatcccccattgatttcgactatcttggatacttttttctacggtacgacgaatacaagaaacagagggagtcatgcctctccttggcagaaagctccctctccgcattgaaaaatggctag</cdnaseq> |
| Protein Sequence |
<aaseq>MGSEGRSWSGAAAVGGGVEGEAAIAAVVAPAPGDVPASGASVDI ALPLPEMTPRIMRRYLQGIGEGVVIAGQLALLDRDGVWRHHEYVKLYNLLSLKILPIY QKLSGNHNCNLLLAVLKVSAEDGKGNKSSVTVRLYGPNTDLVIDRKRELQAIPHLSAA GFGAQLLGTFENGMVQSFIYARTLTPSDMKEPRIAAEIAKEIRRFHQVDIPGSKEPQL WDDIFKFMKKASILEFEDKEKQKRYETISFRKIQDEVKELKKSSTSLISSMGRTATVV MILQTISMNMQAMIATIACIQIKILNTTSSGTIFNLIGQVQLQDLDALYVETNTYRLA SHIYWALWALIQAKVSPIDFDYLGYFFLRYDEYKKQRESCLSLAESSLSALKNG</aaseq> |
| Gene Sequence |
<dnaseqindica>1..171#417..508#845..1037#1412..1517#1776..1898#2222..2313#2754..2859#2941..3002#3499..3591#3730..3858#atgggatcggaggggcggagctggagcggggcggcggcggtggggggcggcgtggaaggggaggcggcgatcgcggcggtggtggcgcctgcgccgggggacgtgccggcgtcgggcgcgtccgtggacatagcgctgccgctcccggagatgacgccccgcatcatgcgagtacccctgatccccccctctcttcgaatttgcttctgggattttgtttcgtttcgttctgattgatgcgttcgtgagtgagtgggtgcggtgcggtgcgggcgctgagttggaggaatcgcgggtgtttttattttattttatttttttttagagaaaaggctcaagggaatcgcgggagttcgttgtctgtcttcaatttggtttttgtttctcacgcgaggaatgttcgcgcgattgtgcagaggtatctgcaaggaattggtgagggggtggtcatcgctggacagctcgcgcttctcgatcgagacggtgtctggcggcatcacgaatatgtgtgagtccctgctccttggcagtttcatggcttgtcgcgttgtcctgaatttttttttcttcttcctgtttcacctgagcaactcgttgtaagtagaggaaaacataggccagggctgctgcacaaacaagggaaatttggtgttaggcacattttaaagtaatttggatagcggcagacataacattatggccatcaacagaacttgattgcatttctgaattctgaaaacttaattgcatttctgaacttttgtgggatcaagaaactcttttaccattacttgcattttttttctaatgcctaaatcatcttatcttatgttgtttgctatagaaaattatataaccttctgtcactgaaaatactaccaatttaccaaaaacttagtggaaaccacaactgtaatttactgcttgcagtgctgaaggtgtccgcagaagatggcaagggtaacaagtcttctgtgacagttcgtttgtatggcccaaatacagacttggtgattgatcggaagagggaattgcaggtgagcatttgaatagtgtgattattgatgatgcgtgcatatcatgtcctataatgttccttcatggctgtgcaattggttcatctgttagtcctgctttattttatttggtgcatttttttacagcaagctcaaagcacctcattgttttttcaaatattcaagggggcttgtaagggtttttaatgtattattaaactttgtattttccacagcgtcttctacagtgatttgatatagaaaagcaacatcaattataaacaaatgttatcttatactgcgaccagcacaacatccattatgtcaaagaaatacccactattttctggtgtaaattgttccctaatgcatacatctattaccgtcatgtttaggctataccacatctctcagctgcagggtttggggctcagctacttggaacatttgaaaatggaatggtccagtcattcatctatgcacgaacattaactccttcaggtaagcatattattgttattcgtggatggggtgggctctttctcactgttatattgtctaatatcatctttctcttttttcatttattacctagaatattgtaaactagtgatctgaaatgctagttcaaaaggttttgtgggtttttagttggaattatacatagtttgctaagttattttacactttagatttgcaaaagtcttgaaaaatgcttcttgcaatttgcttgtaaatattcattactttgttttctagacatgaaggaacctagaatagcagctgagattgccaaagagattcgcagattccatcaagttgatataccaggatcaaaagaaccacagctatgggatgatatattcaagttcatgaaaaaaggtacccttccaatgatatatcatacattcaagtttgttacttagttagctttttttttttgataaaggagatactccttgcttctgttgaaagtgtataatgttcagagcgaagtaaaaataaacaaagaaagaaataagggtataattttcagagcaaagtaaaaataaacagagaaacaaaagaaaatctgggtttaccaatttgaaacatcacgtgacaaatggatcagacaaaatccaaactaggtgctaacataatgctaccatctagctgcttctatggcatctatgttcttacgttctgtcaaatacttctcacagcttcgatattggagtttgaggataaggagaagcagaagagatatgaaacaatctcttttagaaaaatacaagatgaagttaaagaacttaaggtaccttgcaaatgaatctagattttgtgttgtttttattttatttttactgttaggtactatggatgcttggagcaatcagtttcatcttattcaaagagccacttttgttcatatttttccttcaccatagaagggctcatattcataaggcaatactttataatacgatacatgtgtatatcaaattttatggctttgttgtccatgtataaaatacgtctttcttttcttataggatctgtcagaccttctgcatgctcctgtagttttttcacacaatgacttgctttcaggcaatttgatgttgaatgatttggaaggcaagcaccgagttcacttgcattgtttatatttcgatatttaatatatttttttcattttatattctatacttgcaaaactgaataggtggctatatgtgtttgtctttttgccagaaaagctctacttcattgatttcgagtatgggtcgtacagctaccgtggttatgatattgcaaaccatttcaatgaatatgcaggctatgattgcgactatagcttgtaagttatcttcttactggttgaattctccaataaaacttattgtcatcatgttgctcagtattttgttgcctgttctaggtatccagataaaaattctcaataccacttcttcaggaactatcttcaacctgataggccaagtgaggtatgttaatatgataggttgtcctcttgtgaagcaaaacaaacggaattaatacatggtgttgctagcttttcttacaaggtcgagtcatatggtgaacccattgtaaatttggtgttagtcataagtagtgtcgagtcatatggtgaacccattgtaaatttggtgttagtcataagtagtgtcgagccatgctataagtagtgtcattgcttgtttaaattaaaatcagtaacacatgcttacgtgctacatgtaattgccatttatacttgtctaattaacgtgaactgctcatattacttttctgaaaggattgtatgatgcttagcgttaaaggtggttggaaaacatttgaagtattgctttaagaaaatatgtgtattcttttgaatgtagaagaacatcgtgcaattttttatctgatgttatctcaccacaatgcacttgttgtatttaaaattcttatttggtttatttctaactggaaggtccaactgcaagatctggatgccctttatgtggaaacaaacacctatagattagcatcacacatttactgggcgttgtgggctcttattcaggtgagcactaccctccttttgctacagacacaacattcagtttcaagtcttttcaagttgttcttgtagcaattgactttactgccatgcaccccattataatggaacttggaacatataattgccatttggatgcaggcaaaggtatcccccattgatttcgactatcttggatacttttttctacggtacgacgaatacaagaaacagagggagtcatgcctctccttggcagaaagctccctctccgcattgaaaaatggctag</dnaseqindica> |
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