Difference between revisions of "Os09g0458300"

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(Created page with "{{JaponicaGene| GeneName = Os09g0458300| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001069910.1 GI:115479562 GeneID:4347270| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0458300|
 
GeneName = Os09g0458300|

Revision as of 21:00, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0458300

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001069910.1 GI:115479562 GeneID:4347270

Length

2708 bp

Definition

Oryza sativa Japonica Group Os09g0458300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17974727..17977434

Sequence Coding Region

17974864..17974933,17975018..17975561,17975659..17976128,17976217..17976352,17976459..17976530
,17976654..17976722,17976813..17976884,17976971..17977042,17977131..17977158

Expression

GEO Profiles:Os09g0458300

Genome Context

<gbrowseImage1> name=NC_008402:17974727..17977434 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17974727..17977434 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatccccctctccctcctcgccgtcgtcctcgtcttcggcatcgccggcgccgccgatggcctttcagggtaccagataagttgcggtgcgacgtcggagaaggtggtcggcgacgtgacatgggttcccgacggccggttcgtcagcgtcggcaacgtctccgacgtgcggtcgccgggggtgctgccggtgctctcctcgctccggtacttccccgacacgtcggcgaggaagtactgctacgtggtgcccgcggagaggaagaggaagtacctcgtccgtacgacgtacttctacggcgggttcgacggcggcagcgcgccgccggtgttcgaccagatcatcgagggcacgcggtggagcgaggtggacacggcgggggactacgccaggggcctcgccacgtactatgaggccgtcgtgctcgccaccgagaaggaggtcagcgtgtgcctcgccaggaacgccgccaccaagtccagccccttcatctccgcgcttgaggtgtcgccattggaggactcggtgtacaactccaccgacttcgagtcctacgctctcagcaccattgcgcgccacagcttcggccacgacggctcagcggccgtcagctatccaggcgatcgtttcaaccggttctgggaggcgcacagcgacgggatgccggtggtggagagccaggcgagcgtgtcgcaggcggcgttctggaacaagccaccggaggacgtgttccgccgaggcgtcacgacggccggcggccgcggcgagagcctggagctccagtggccgccggcgccgctccccgccgcgagctactacctggcgctctacttccaggacaaccgcgcgccgggcccgctcagctggagagtgttcgacgtcgccgtcaacggcgagacgttcttcgccggcctgaacgtgtcgacggccgggtcgatgctctacggcgacaagtggccgctctccgggcggacaaagatcacgctgacgcctgcgccaggctcgccggtcgggccggtgatcaacgccgccgagctgatgatggttgtgccactcggagggaggacacatcccagagatgtgatcggcatgcaggcgctagccagaggtttcgacaacccaccggctgactgggccggcgatccatgtttgcctcaggggaactcatggactggtgtcacctgcacccaagaaccacttgctcgagtggtttctctgaatctcacgaattttaaagttgggggatcaatatctgacggcattgccaacctgacagcgatctcaagcatttggcttgtgggaaacaatctgaccggaccaattccagatatgagcctcctacatcatttggtttctctgcatctggagaacaaccgactgacagggcagattcctccatctctagggagcatgccaaggcttcgtgaattgtttgtgcagaacaatgcactgcaaggggcgattccgatcagcttcaagaacaaaacgggcttcatgttccaatatgcacctgggaataaccttagctaa</cdnaseq>

Protein Sequence

<aaseq>MIPLSLLAVVLVFGIAGAADGLSGYQISCGATSEKVVGDVTWVP DGRFVSVGNVSDVRSPGVLPVLSSLRYFPDTSARKYCYVVPAERKRKYLVRTTYFYGG FDGGSAPPVFDQIIEGTRWSEVDTAGDYARGLATYYEAVVLATEKEVSVCLARNAATK SSPFISALEVSPLEDSVYNSTDFESYALSTIARHSFGHDGSAAVSYPGDRFNRFWEAH SDGMPVVESQASVSQAAFWNKPPEDVFRRGVTTAGGRGESLELQWPPAPLPAASYYLA LYFQDNRAPGPLSWRVFDVAVNGETFFAGLNVSTAGSMLYGDKWPLSGRTKITLTPAP GSPVGPVINAAELMMVVPLGGRTHPRDVIGMQALARGFDNPPADWAGDPCLPQGNSWT GVTCTQEPLARVVSLNLTNFKVGGSISDGIANLTAISSIWLVGNNLTGPIPDMSLLHH LVSLHLENNRLTGQIPPSLGSMPRLRELFVQNNALQGAIPISFKNKTGFMFQYAPGNN LS</aaseq>

Gene Sequence

<dnaseqindica>138..207#292..835#933..1402#1491..1626#1733..1804#1928..1996#2087..2158#2245..2316#2405..2432#agtagaaaattcatagagaaaaataatgaacttctgaagaaactgccacccaaacaaaacaaagcagaagtctcaactctcaagccggcaacgagccaacgaccatctcattgcggttgcaccttcctcctcctccaatgatccccctctccctcctcgccgtcgtcctcgtcttcggcatcgccggcgccgccgatggcctttcaggtgatgaacgcttttgccctcggtgagttcacaacgtgcaatgtgcttgggcagttgatgaacattgtccgcgtttgtacacagggtaccagataagttgcggtgcgacgtcggagaaggtggtcggcgacgtgacatgggttcccgacggccggttcgtcagcgtcggcaacgtctccgacgtgcggtcgccgggggtgctgccggtgctctcctcgctccggtacttccccgacacgtcggcgaggaagtactgctacgtggtgcccgcggagaggaagaggaagtacctcgtccgtacgacgtacttctacggcgggttcgacggcggcagcgcgccgccggtgttcgaccagatcatcgagggcacgcggtggagcgaggtggacacggcgggggactacgccaggggcctcgccacgtactatgaggccgtcgtgctcgccaccgagaaggaggtcagcgtgtgcctcgccaggaacgccgccaccaagtccagccccttcatctccgcgcttgaggtgtcgccattggaggactcggtgtacaactccaccgacttcgagtcctacgctctcagcaccattgcgcgccacagcttcggccacgacggctcagcggccgtcaggtaagaacaatcacgcaccaccgcccatttccttgctacgaattcatggcgtgcttgccgcttgatgctcgtcgaatctgtgattttttttttctagctatccaggcgatcgtttcaaccggttctgggaggcgcacagcgacgggatgccggtggtggagagccaggcgagcgtgtcgcaggcggcgttctggaacaagccaccggaggacgtgttccgccgaggcgtcacgacggccggcggccgcggcgagagcctggagctccagtggccgccggcgccgctccccgccgcgagctactacctggcgctctacttccaggacaaccgcgcgccgggcccgctcagctggagagtgttcgacgtcgccgtcaacggcgagacgttcttcgccggcctgaacgtgtcgacggccgggtcgatgctctacggcgacaagtggccgctctccgggcggacaaagatcacgctgacgcctgcgccaggctcgccggtcgggccggtgatcaacgccgccgagctgatgatggttgtgccactcggagggaggacacatcccagagatggtaacttgacaaaatctcatggatcatgccgaattcgtggtttgctcatcgaaatttattcatgtctcattgtctcgtgttgctgcagtgatcggcatgcaggcgctagccagaggtttcgacaacccaccggctgactgggccggcgatccatgtttgcctcaggggaactcatggactggtgtcacctgcacccaagaaccacttgctcgagtggtttctctgtaagttactgattgccatatgtactatatgcatcaatgcctgcaaaaggggcagtatgttctcttgttgatctctgaaaccgaaatggtggcaatcacacggcaggaatctcacgaattttaaagttgggggatcaatatctgacggcattgccaacctgacagcgatctcaagcatgtaagcctccttaaacaagctaatgccagactcccattctttaattgtcctgctgacagattggaaaaagattgcagtggtaaagtaaatattgattgcctaatttgggtacggtgattgcagttggcttgtgggaaacaatctgaccggaccaattccagatatgagcctcctacatcatttggtttctctgtaagcacagtagctacatactgctcaataattgttttggagaatgcttcagtaaactgaagatcacctggctaaatttcttaactgaaggcatctggagaacaaccgactgacagggcagattcctccatctctagggagcatgccaaggcttcgtgaattgtaagtggcttcaacaagtagtttatactagtcaagtatttgagttcatcgacttgttatgaccgcttgagttttttgcttgacaggtttgtgcagaacaatgcactgcaaggggcgattccgatcagcttcaagaacaaaacgggcttcatgttccagtgagtgatcacgagtgctgtatttaagcttgtgattccttatttttctttagtgactgatgaaatgaaaataatcttgctctgacagatatgcacctgggaataaccttagctaacacaaattcaacgagtataagcttgttcaggttgagatcatccggtgttcatgagatgaagaaaagagacattaaccgttgacgacacgctggaacacattaattaaacaccattttttcccttttattttgtttctttttgccgttcgattctatccgtatttttgttcctcctttcctttctttttggcaaacatgaggtgatcctgaatgtatttaaccctgcaactgtgtggtacctgattcaatttatttgtatgtatatttttaattact</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0458300, RefSeq:Os09g0458300