Difference between revisions of "Os09g0489500"
(Created page with "{{JaponicaGene|
GeneName = Os09g0489500|
Description = Similar to Transcription factor HBP-1b(C38) (Fragment)|
Version = NM_001070069.1 GI:115479880 GeneID:4347436|
Length...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0489500| | GeneName = Os09g0489500| | ||
Revision as of 21:01, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0489500 |
|---|---|
| Description |
Similar to Transcription factor HBP-1b(C38) (Fragment) |
| Version |
NM_001070069.1 GI:115479880 GeneID:4347436 |
| Length |
9095 bp |
| Definition |
Oryza sativa Japonica Group Os09g0489500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:19522191..19531285 |
| Sequence Coding Region |
19522511..19522705,19524749..19524988,19526453..19526839,19526963..19527040,19527252..19527311 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:19522191..19531285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:19522191..19531285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatgagcgggagcgagagccagcaggagagggagcatcgtcagcagcaggagatgaacatctcctttgggatgatgatgaaccatggccaccatcactacggacagcatcagcagcagcaccatcatcatccgcctccgtcatcgtcttcctcttcctccatgcatgccgctgccgcaagcttcatcaaggaggcatctgcaggagcttatgatcatctgggggagctggaccaggccttgttcatgtacctggatcatggcagccatgcggcgtcgcaccaagaacaaaggcagaccctcaacatcttcccttcccagcccatgcatgtggagccatcacccaagggagagattagtttagtgctgtccccagcagctgtgggaaccaagatggcgaggtcacctgatcatcaccaccaccatcagcagcaagcagcagcagccatggaggagttggcgacagggagcaggagacaggatcaccaccacctgcagcaccaacctttcgctgctgagcctgcagggatcaacagggatgtgaagccggtgacagccaagaaggatcacaggaggggtgtatctactggtgaacgcgacccaaagacgctgaggaggctagcccagaacagggaggcagcaaggaaaagcaggctaaggaagaaggcttacatccagcagctggagtccagcaggatcaggcttgctcagctcgaacaggaactgcacaccgcgagagcccagggggtgttcttccccggcagcggcgggctgatcggcgagggaggcagcgggaagggggtcctgctgggcgggatcgatggcgtcggcggcggcggcggcggggggctgagctcggaggcggcgatgttcgacgtggagtacgggaggtggcaggaggagcaccaccggctgatgtacgagctgcgggcggcgctgcagcagcagctgccggagggggagctgcaggtgtacgtggagagctgcctggcgcaccacgacgaggtcgccgccatcaaggacggcgccatcaggggcgacgtcttccacctcatctccggcgtctggatgagcccagccgagcgctgcttcctctggctcggcggcttccgcccctccgaggtcatcaagatgctggtggcgcacgtggagccgctgacggagcagcagatcgtgggggtgtacgggctgcagcagtcggcgctggagacggaggaggcgctgacgcagggcctcgacgcgctctaccagtcgctctccgacaccgtcgtctccgacgccctcagctgcccttccaacgtcgccaactacatgggccagatggccgtcgccatcaacaagctctccaccctcgagggcttcgtccgccaggctgagaacctgaggcagcagacgctgcaccggctgcagcaggtgctgacgacgaggcagatggcgcggtcgctgctcgccgtctccgactacttccaccgcctccgcaccctcagctccctctgggtcacccgccccaggcacccgcctcacgaccaccagccgccgccgcactccgccgccccccacacctga</cdnaseq> |
| Protein Sequence |
<aaseq>MMSGSESQQEREHRQQQEMNISFGMMMNHGHHHYGQHQQQHHHH PPPSSSSSSSMHAAAASFIKEASAGAYDHLGELDQALFMYLDHGSHAASHQEQRQTLN IFPSQPMHVEPSPKGEISLVLSPAAVGTKMARSPDHHHHHQQQAAAAMEELATGSRRQ DHHHLQHQPFAAEPAGINRDVKPVTAKKDHRRGVSTGERDPKTLRRLAQNREAARKSR LRKKAYIQQLESSRIRLAQLEQELHTARAQGVFFPGSGGLIGEGGSGKGVLLGGIDGV GGGGGGGLSSEAAMFDVEYGRWQEEHHRLMYELRAALQQQLPEGELQVYVESCLAHHD EVAAIKDGAIRGDVFHLISGVWMSPAERCFLWLGGFRPSEVIKMLVAHVEPLTEQQIV GVYGLQQSALETEEALTQGLDALYQSLSDTVVSDALSCPSNVANYMGQMAVAINKLST LEGFVRQAENLRQQTLHRLQQVLTTRQMARSLLAVSDYFHRLRTLSSLWVTRPRHPPH DHQPPPHSAAPHT</aaseq> |
| Gene Sequence |
<dnaseqindica>8581..8775#6298..6537#4447..4833#4246..4323#3975..4034#3773..3817#3398..3610#3197..3249#1824..1930#511..698#gatgcagagggagcatggagccaaacagaaagtctgtttcgccattaatggctctcccactcacctctctctctagaaacacatagccaagatcatcatcatcagcaaccatattagtgaattaagaggaaatcaaagcagtagcagcccaggaacagcatcatcaaagcagtaagagagggtagtttgcaagtggtgctagtgtccaaggcgccatcacgaactagagtcctagatagagctagaggtcatgcatggggtagttgctggtgtggaagaggaagagagaaagtgagtgagagagagagaggtggcgccttggctgctagcctcatagagtcaaagagtatttaggaccttgcagctatggctatagatagatagaggcacatacgcatacgtatatagcttgctaccttgccttctctgtgtatgtttcggcgtgtgttcttcttcttctcttcttcctcctctcgattctgaagaggttagctttgatttgatcgatcgatgatgagcgggagcgagagccagcaggagagggagcatcgtcagcagcaggagatgaacatctcctttgggatgatgatgaaccatggccaccatcactacggacagcatcagcagcagcaccatcatcatccgcctccgtcatcgtcttcctcttcctccatgcatgccgctgccgcaagcttcatgtacggctttgtttactgaatctctctccctctctctctctctctctgatttgtttgatgcatatatatgtgtgtctctttcttgttcttgatttgggccgtgtcttggagtttgattttgatctctgatttgttagtcatgatcatgcatggtttgttttggtttggttcttttttcttgcttgctctctttgtttctgctggttcttctgatctcttttttgccatggtttcctcttcttcttctccttcttctttttatggaaactgctttaatttcctcttctcctcctcctcctcttttaacaaaacactagccatggagaaactaggttaccaataatcttcttgtggactgaattttgcattctactgttctacatgttgaagattttgcttctttttttgctagaattttgcattttacatgcagacgattttgcctttttgcttcctggttgggaattcagtgattgtttgagcggatgcaaacagatcggtccttttctcttccttcttcctctccccccaagaaaaaaaaagttagacgatgatcaaacaagttcagatttaaaaattcagtacttgtgatttaatatctggagccagatatagttgaattgttgcaacaactcgctagtctttctttcaaattttgggaggtcagcgattcatttccgcataagtacaagagcattacctaagacatatttatgaccaactgatcatacatatctgcccaagtttttacatttaatttacagtgagcatgacttgcacacatgaaatttggagagtacatggccatgcttattttctgggctgtgccaaaataaatgctacaaaggtagagtagattcatattattcttctgctcctactcttgcagtcttgcagaggttggaccagacaaataattaatatagcatcatacataattggcttatagaagcatgatttcatgatgatgtgtgatgccttcactacttcctcaaccttgtgcatgcatgctactatactacctgcatctatctcacacatacatatagctatacctcatcaccaacaattttgcttcttgtgctgctcctaattttgcttcttgtgttgcaccaccaggagcagcaaggaggcatctgcaggagcttatgatcatctgggggagctggaccaggccttgttcatgtacctggatcatggcagccatgcggcgtcgcaccaagaacaaaggcgtacgtatacgaaaaaaacccgtaaattttaattcgccaaccgaaaaatcaccacaaattttctcaaacatgcattcaccatatatatttccttgcaaaaagttcagattttttttttcaaagagtattaatgcaggtgatgagatcagtagtaacagttttcagttgttcttcttttggcatttagcattagtagtaataatagcataataacagcagtatatatagcttaggcacagaaacaaatgtgccaagcatacacagggagtagcagtaggctgtagtataggaggaggagggatatattcctatggttgcagaaagttgcatcctttttctggggtcatcagaaacgatcatggtatacggccggccggcctgcatgcagcagattctcaggtactccattttgaccaggatatctgctagctgcaacaaatctctgcagtactactactgctactactaccactgcactcctgtggagatcacacatctcaggaccagggaatcagcaacccaaagtccatgcatatgaaaccaacaatctctctagctatacctctctcttccctctctctctctctctctatctctgactgctaagatctggccggctggtttggactgtgacatgtaacaaactgctcaatgatttcgccgagatcgagctgcatctgcatgtggcctggtgcagagaaagagggacgtacacacacacgccgaagagatgatcgatcaatccccatgctactgatcgttcttgttgctgctactagctaggagtagtagcaagatgtgcacatttgttcgagtttgacccgatcgatgctatccacttctgttgtttccagcttcaggttacagtgatcagtgttgcagtgtagcagcagctagctgtgcagctgtgtgatatctgtccttggctcccgtatctctcgtagcccccagctttctcgtgttgcctgtgtgcctgcagtactgcagctatagctagctttggacgtacctagcatgcatatatagtacacactactctctgccatgcaaagcatgatgaatttgagcagcagcagcagtagcacagtagtgtcttgttccagctgcatgcctgcatatatacagcctagctctcttcttcagtagagttttcagtagcaattcgatcagtttgtgagttgtggtgtgtgagtctccagggttagctggtcttctgcttttgctcgatcgatctcttgatttgtgttgtgctcatggatgatgcagagaccctcaacatcttcccttcccagcccatgcatgtggagccatcacccaaggtatttaattaattttacttactttcatctgaatctcacattggttatgtcatttgtcttttcaatgtagcactcgtgtgtagtatatatgaaatcaaagattggtttaatgtttgtggatgtgatgattgattgattgatttggcagggagagattagtttagtgctgtccccagcagctgtgggaaccaagatggcgaggtcacctgatcatcaccaccaccatcagcagcaagcagcagcagccatggaggagttggcgacagggagcaggagacaggatcaccaccacctgcagcaccaacctttcgctgctgagcctgcagggatcaacagggatgtgaagccggtgacagccaaggtcagcatcatcacttaaccacttaattaaccaactaatatctaaccctgctagctaaagaaaacaccctgattaatctattcagaacactgtccttgattgtttttatgttttagcttacattaatgtgcatattgtttatgtttttttttattattgcagaaggatcacaggaggggtgtatctactggtgaacgcgacccaaaggtactatactagtgatattctcaagaaataattagagattagttgttgttctctttttgtgcatatcagttgagttaaggacaatactaaaaatgatttggtctgatcatgcttacttttttgcgtatcattttgtgattaatgtaaatatatgcagacgctgaggaggctagcccagaacagggaggcagcaaggaaaagcaggctaaggaagaaggtgagtgaagcaaaattaaacagtaattaaacacagaaagaaaaagaagaaaatgacaggctatatatattcaatatattcagaacaaaagcaatcacccaaatttgatcaaattaaaccaaattaattttgctagttaattactaccactcttcttcaattcagccactgtggattaattactttactgaaattttgactgaaacgacaggcttacatccagcagctggagtccagcaggatcaggcttgctcagctcgaacaggaactgcacaccgcgagagcccaggtaggcgaatttcataatttcaaattcgagcaaaattcaaactgcacccaaatcaaatcaaacacaaccaattcggattatgtattatggatgaaaatgtgtacggatctatacatggtgcagggggtgttcttccccggcagcggcgggctgatcggcgagggaggcagcgggaagggggtcctgctgggcgggatcgatggcgtcggcggcggcggcggcggggggctgagctcggaggcggcgatgttcgacgtggagtacgggaggtggcaggaggagcaccaccggctgatgtacgagctgcgggcggcgctgcagcagcagctgccggagggggagctgcaggtgtacgtggagagctgcctggcgcaccacgacgaggtcgccgccatcaaggacggcgccatcaggggcgacgtcttccacctcatctccggcgtctggatgagcccagccgagcgctgcttcctctggctcggcggcttccgcccctccgaggtcatcaaggtacgctactatgcactccccccgccatggattggcttggattgg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