Difference between revisions of "Os09g0498600"

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(Created page with "{{JaponicaGene| GeneName = Os09g0498600| Description = KH domain containing protein| Version = NM_001070102.1 GI:115479946 GeneID:4347471| Length = 6189 bp| Definition = ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0498600|
 
GeneName = Os09g0498600|

Revision as of 21:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0498600

Description

KH domain containing protein

Version

NM_001070102.1 GI:115479946 GeneID:4347471

Length

6189 bp

Definition

Oryza sativa Japonica Group Os09g0498600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19933568..19939756

Sequence Coding Region

19935073..19935309,19935550..19935801,19936559..19936936,19937345..19937421,19937695..19937803
,19938412..19938555

Expression

GEO Profiles:Os09g0498600

Genome Context

<gbrowseImage1> name=NC_008402:19933568..19939756 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19933568..19939756 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgattatcatgcaaggaattattcaagtaatatggctgcccccggtcctagattctttgttgaacaagagatagtcttcaggatgatatgtctcaatgaaatggtggggagcataatcggaaaaggtggttcaactattcgcgcattacaaagtgaaactggtgcttcgattaagattatagagcctaattctgattcagaagaacgtgtaattgtgatatctgcacatgagaattctgagatgatgcattctccagctcaggatgcagtacttcgggtgcattctagaatctcggagtcatcgatggataaaagttctgctgtaactgcaagacttcttgtaccatcacagcatattggttgcttactaggcaaaggtggttctatcatcgcagaaatgagaaaaataacaggagctggtatccgaattttcgggaatgaacaaattccaagatgtgcacaacgaaatgatgagctagttcaggtcacaggtagttttcaatccattcaggatgcattgcttcatatcactggaaggattagagatgtcatcattcccatgaagccacatccaggtggaggtatgcccccatatccacctggtggaaacgctccacctcaccacccaagacaagaaccagcaccaccgcatcccactggaggcatgcctccatatcctatgccttctttcagagctgatcgtcctatgggtccttttgatatggtcgatcatcgaccacctccccctcattcaatggagcacatgggtgctgataggatgccctactcatatggttgtgaacaaggaggtggtcctcgaccttttctggaccagccatcaccaagtgcctgggctcctgaggcaccaaacagtgaagctccaagaaatatgcctgagacagtaccacctgcagatttcagaaagggagcagtggcaggaacaaatcaagtggctacaccatctaatgcaactgaagtcattattccccgcaagtacataggttttatttgtggagccaatggcagtgaccttgctgagataaagaagatgtcaggtgccacaattactgtccatcatccaaaacctggggatgcaaatgcattggttattatatgtggggatcctgaccaaactaagaaggcacaaagcctacttcacgcgttcatcttttgtggtctctaccaaacttag</cdnaseq>

Protein Sequence

<aaseq>MPDYHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKG GSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISES SMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDE LVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEPAPP HPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRMPYSYGCEQGGGPRP FLDQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQVATPSNATEVIIPRKY IGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTKKAQSLLHAFIF CGLYQT</aaseq>

Gene Sequence

<dnaseqindica>1506..1742#1983..2234#2992..3369#3778..3854#4128..4236#4845..4988#gttagctaagctgtagggttttagctcaaccgtccacccccatggaaatctcccccaactccgccgccgccaccgccgccgccacggcggcggctccggcctcttcctcgacctcctccccatccgcccccaagcgcctcaccaccacgctccgcatcctctgcccctccagccgcgcgtccgcgctccgcggggcgtcgcgggacctccacgtggaccagccccccgtcggcgacgaggccgtgctctccatctccgggccggacgcccccgccgtggccgtgagggcgtgggagcgggtcgtggggcacagggtcgggggcgacgaggccgccggggaggaggagagggaggtgcccggcgtggtgggctgccggatgctggcggcgagcgggcaggtcgggtgcgtgctggggaagggagggaagacggtggagaggatgcggcaggagagcggcgcgcagatcagggtgttccggaacagggatcagctccctccctgggctgcgccggtggacgagcttatccatgtacgcatctcaactcagctcacagatatttcttcttttttgtgctatattcatctaatcatcccccctgacattgcgtgggtggattattcatcacaatttttcggtgcgcccggcgtgttcatccgttagctagaaatttatgatgaaatgaggtggttcaaacttataatgaggtggatcgtgtgccttagttgcttgcaaaactgctaaaattgtttatgggagtttgagcggtgtattgcactatgcaaactaatgaaaaggcaattttttgataggatgataatttaatataggtggtaggataagtttcagttcattcatggttatgttacgggtcctgtatttctttcagctcatatgcatcttgttcaaatgaacaaataagttcgaaatgagctatcttgcctgatttgtactttataattggctcttattgcgattcagcaattgaaaacataagggtgatgtctttcatataatttattacaatagtgttttatcgataaggagtttgtagagaaaatataattaaaggttggttatttttgttgcatagagtcatagaagtcaaattcattatgagcaagttccgcacctctgattatgtagttctaggaaatcataatgtcccagttctaaatatactaaaattgtaatagttctttttacctttcccgtatacttaagtgttgcattgctaacggctttatagtttgaaatgctcaagatggacatttttcttctttaacttgggtacctattaaaaattcaggtcattctgacacggtaaccttttcctgttagataagtgggaacttttctgcagtaaggaaagcattattgttagttacaacctgccttcaagataaccctaggccagatgcaagcaactttccacctggaagatttgggcctcctggcccagttggcatagatcctcattctcaaagaggctatttaccaccatccatgcctgattatcatgcaaggaattattcaagtaatatggctgcccccggtcctagattctttgttgaacaagagatagtcttcaggatgatatgtctcaatgaaatggtggggagcataatcggaaaaggtggttcaactattcgcgcattacaaagtgaaactggtgcttcgattaagattatagagcctaattctgattcagaagaacgtgtaattgtgatatctgcacatgaggtgtgtctctgaacctataaataaaagtatctgtttaatttcaagtgattaaaatccttatgcagggagagtgaattttattttctcaacgtacaatatagatctgtgcatctgtaaacattggcatgccatgtgcatcggtgtcctgccaacaatgatgggagatatgcgattaattttgtccttaggttttcagttgtctggagttatttttgatgggtttaatcttatttgttgcagaattctgagatgatgcattctccagctcaggatgcagtacttcgggtgcattctagaatctcggagtcatcgatggataaaagttctgctgtaactgcaagacttcttgtaccatcacagcatattggttgcttactaggcaaaggtggttctatcatcgcagaaatgagaaaaataacaggagctggtatccgaattttcgggaatgaacaaattccaagatgtgcacaacgaaatgatgagctagttcaggtatttaatgttatagtaatcaaccactccattttatgttcttgtgcatgctatgaattttcagtaataagttccatgttttatgtgcgccgcagtggtctcttaagtttacatgtccattcgaaattttcatcgttatgcatataatctactaataacacctagttatagtgtgttctttgctttaattgtggtcttgtagcaaaaattttaagtttgatacaagtgttggttaatgtaaagtatcaacactactataaagggtcccaccttactgaatcacattaaaggttcagtgttgaggtgaactttgtttaccagtaatagctaagagcataaggtcttcagacttcagtgtgatactgtgaatatgtgatcaattcaagtatgttgggaaatgtcaagtatgcaaagcatgctcttgaaaaagatttccaagtgaactactttatacgtattcaaagaagcaaactacagaatatctttgtcctgttaaatttaagaaagcagaattgtttactttgtggcatatgctgtaactcttttgtggtaattttggccaacctgtttcacatcacaagttatccatttgaaaaatgatccacagtttatcacaactaatcaactctttcaagtggctttcattgaatcttccttttaagaaagtttacttaggttattcatagctgtgttattcttattcccttgacaattgctgaccaggtgttaaatgtaactatggagtttcttcttacaggtcacaggtagttttcaatccattcaggatgcattgcttcatatcactggaaggattagagatgtcatcattcccatgaagccacatccaggtggaggtatgcccccatatccacctggtggaaacgctccacctcaccacccaagacaagaaccagcaccaccgcatcccactggaggcatgcctccatatcctatgccttctttcagagctgatcgtcctatgggtccttttgatatggtcgatcatcgaccacctccccctcattcaatggagcacatgggtgctgataggatgccctactcatatggttgtgaacaaggaggtggtcctcgaccttttctggaccagccatcaccaagtgcctgggctcctgaggtaacttactatgcgtttattctagaatgtaggaaacacatatatgggaaatgcagtttggaattaggcagaagttcttcagcatttttcctgggtgtgcagtgcacaatggtctctttcatgaatttccaccaacattcgggtcctgctgacaagcgataggatgcttgccagcaggggtggatccaggactgggcagtctgggacaactcagcctattttggctcatgttaacttagcatcataaaaagatcaaagcccatttgtcgtaaaaaaatacatcaaagtccaggacttgggtttgccttgccaccagagttttattagaaaactgtaaaagtttgcacaccacttctcttgttgatttaggtgttgtaggcttagaataaagtccctgatcttgtgcaggcaccaaacagtgaagctccaagaaatatgcctgagacagtaccacctgcagatttcagaaagggagcagtggcagggtaagttaatttccatttggtggtgtttctttctctttgacctttcactaaaaggaaatattctcaatttctcattctgttaatcttttaggggctaaaagactttgaaaagtatatgcatgagaacttgtgtggaaagcaaaagattgaatcgaagcatatatagttctcttctagcaatgcaacccattttgaaaaacaaaactaaatggcaaattctcctttctaaagaaggttacttagaacagtgttttgacttgttcttctcaacagaacaaatcaagtggctacaccatctaatgcaactgaagtcattattccccgcaagtacataggttttatttgtggagccaatggcagtgaccttgctgagataaagaaggtacttactctctgctttattagttttcagcattcatctaacttcccttgttgtcttgccctcaccagtgatgcaaaggacatgccagtttttttacttgttatcatggagtggaagcccttgtcaacttgttgccttgtccttttctctagaacaaagtccatgcatacagcctgtgcaacagtcactatcatgccatatttactggtaccagaaaatgaaatgaaaattaaaagaacatgtaaaacattcttcttcactatacctatttcaaattcactctgttttaaggctgaaaagaagagaaaaggcaatcaaatgataaattaaaaggaaaagtgaaaaaataattattcatagcaaacttgtctttttgtatcttaaaaattttgtccttgaagttgaaatattgatgggtgctaggacaatccataaagtatatatcttcatttgttcttggaattttccatattgatttggtgctatatacaaaagctgattgtacctcaaccaatgattgtactagatgtcttgccataacaagatccctcgcatcatctttgttattttgatggttctaacgctgggagttaatgtttacctttcagatgtcaggtgccacaattactgtccatcatccaaaacctggggatgcaaatgcattggttattatatgtggggatcctgaccaaactaagaaggcacaaagcctacttcacgcgttcatcttttgtggtctctaccaaacttagccctgagctttcaggttggtttcccccctgactgattgcacatgtacaattgtaactggcatgaatgtggatgagaatgtggaacattctttcaatgtgaattatttttttctcatttcatgtgagccgtgcgcatgcgcattactgcatcaatgtaaatcttgtattatttttgttctggtacaagaaatggccatgaagcatgagtgtctatgtgttttgcatgtcgatgttgctctggatcttcagctggattttccgtatggtcgtacgagggatttttttccaggaaactcatcagtggtcactggtcacagatgcaactgttcttttgtgctatctggtaagtcttgacttgctggatcatagacgacctcctccgatgtacaagcaacgacgctggcagtgtcaatcagctagctcgtctttgcttggaatccaaatttttgtcacagccattcccagttcaattcaatttggtgagttttcacttttttttgttagcctactatttgtatgagtgttttctagttctaacttagttgtgttgaatcctttttacatcttaattatgtccgtcatttttttcttcacaaacacctaggcaaaatcatttggcaagctttactaccacaagcaatgaaatgcaagttggctggtcagttttacgaactcgaattccttgctgagctagaaacttcgcatgacacagcatagtttcttggaaacataaggagagcacaggaaattggaatatgcaggacatctcacggatgcactcaaaatcatatctaccaattggcagaggcgacgctagactttggcatgaaggtcttcccagttcccaatgaacttgtaggcaattgcaagcctgacatttgtggcatcctgttgctatgctttttgggttgtaatgtattgcttcccttgctttgaacaatgaacaagtcacacgagctttctttgatctgaagcatctcttgctgtcaaagcataggtgttggctggtcacctgctatggcttttagccagataagagcaagttttacagaaggggtaattgtcacatttaattttattcatgtaagataagagaacatctaattttattcaaagtagtcgtaatctgtgtaattagttatttttaagcctatatttaatacttcatataggtgttcaaacgtttgatgtgatagggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0498600, RefSeq:Os09g0498600