Difference between revisions of "Os09g0505400"

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(Created page with "{{JaponicaGene| GeneName = Os09g0505400| Description = Auxin Efflux Carrier family protein| Version = NM_001070137.1 GI:115480016 GeneID:4347506| Length = 2500 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0505400|
 
GeneName = Os09g0505400|

Revision as of 21:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0505400

Description

Auxin Efflux Carrier family protein

Version

NM_001070137.1 GI:115480016 GeneID:4347506

Length

2500 bp

Definition

Oryza sativa Japonica Group Os09g0505400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20203619..20206118

Sequence Coding Region

20203619..20203691,20203786..20204149,20204524..20204609,20205445..20206118

Expression

GEO Profiles:Os09g0505400

Genome Context

<gbrowseImage1> name=NC_008402:20203619..20206118 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20203619..20206118 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgctctacttcgcgctgggcctcggctacggctccgtgcggtggtggcgcctcttcaccgccgaccagtgcgacgccgtgaaccgcctcgtcgcctgcttcgccgtccccttcttcgccttcgacttcgccgcccgcatcgaccccttcgccctcagctaccgcgtcctcgccgccgacgcgctctccaagctcgccgtcgcgctcgccctcgccgcctgcgccgccgccgcctccacccgctgctgcggctccggcggaggcaagcgcggcggcggcggcgggttctcgtggtgcatcactgggttctcgctggcgacgctgaacaacacgctcgtcgtcggcgtgccgctgctggacgccatgtacgggaagtgggcgcgcgacctcatcgtgcagatctccgtggtgcagaccatcgtctacttcccgctgctgctgctcgcgttcgaggtgaggcgcgccaccacggcggcggcggcgccgccgccgccgccgacggggaccgacgacgacgacgtggaggacggcgccgccgcggcggcgacggcggcggcggcgaggcggtcgctgtggccgctggtgagagcggtgtggctcaaggtggcgcgcaacccgaacgtctacgcgggcgttcttggcgtcgcgtgggcgtgcgtcacaaacaggtggcatgtcgaaacgccaagcatcatagaggggtcagtgctgatcatgtccaagaccggggttggactctccatgtttagcatgggtttgttcatggcgttgcaggacaagatcatcgtctgcggcgccggcctgaccgtgctgggcatggcgctgcggtttgtcgccggcccggccgccaccgccgtcggcgccttcgccctcggcctccgcggcgacctcctgcgtcttgccatcatacaggcatacacacatttacacgaaattcattcgccaagttctttttttcttctttcacctgaaatttgtctgaattcaaacggatgcatgcatgacacaagtcctcacgatgaaactgctcgtgatgaacaggctgcgcttcctcaatccatcacgacgttcgtgttcgcaaaggagtacggcctgcacgccgaaatactcagcacagcggttatattcgggacactggcgtcattaccggtgttgatcgtgtactacattgttctaggcttcatacgatga</cdnaseq>

Protein Sequence

<aaseq>MAPLYFALGLGYGSVRWWRLFTADQCDAVNRLVACFAVPFFAFD FAARIDPFALSYRVLAADALSKLAVALALAACAAAASTRCCGSGGGKRGGGGGFSWCI TGFSLATLNNTLVVGVPLLDAMYGKWARDLIVQISVVQTIVYFPLLLLAFEVRRATTA AAAPPPPPTGTDDDDVEDGAAAAATAAAARRSLWPLVRAVWLKVARNPNVYAGVLGVA WACVTNRWHVETPSIIEGSVLIMSKTGVGLSMFSMGLFMALQDKIIVCGAGLTVLGMA LRFVAGPAATAVGAFALGLRGDLLRLAIIQAYTHLHEIHSPSSFFLLSPEICLNSNGC MHDTSPHDETARDEQAALPQSITTFVFAKEYGLHAEILSTAVIFGTLASLPVLIVYYI VLGFIR</aaseq>

Gene Sequence

<dnaseqindica>2428..2500#1970..2333#1510..1595#1..674#atggcgccgctctacttcgcgctgggcctcggctacggctccgtgcggtggtggcgcctcttcaccgccgaccagtgcgacgccgtgaaccgcctcgtcgcctgcttcgccgtccccttcttcgccttcgacttcgccgcccgcatcgaccccttcgccctcagctaccgcgtcctcgccgccgacgcgctctccaagctcgccgtcgcgctcgccctcgccgcctgcgccgccgccgcctccacccgctgctgcggctccggcggaggcaagcgcggcggcggcggcgggttctcgtggtgcatcactgggttctcgctggcgacgctgaacaacacgctcgtcgtcggcgtgccgctgctggacgccatgtacgggaagtgggcgcgcgacctcatcgtgcagatctccgtggtgcagaccatcgtctacttcccgctgctgctgctcgcgttcgaggtgaggcgcgccaccacggcggcggcggcgccgccgccgccgccgacggggaccgacgacgacgacgtggaggacggcgccgccgcggcggcgacggcggcggcggcgaggcggtcgctgtggccgctggtgagagcggtgtggctcaaggtggcgcgcaacccgaacgtctacgcgggcgttcttggcgtcgcgtgggcgtgcgtcacaaacaggtgtgcctacgtaagcgactgcatgcatgcagaaattctcgttttgtccgagtctctcattttactaggtgattcccgcgctttgctgcggaagttccgaagtaacttttaatatgtttttaacagggatggatccagcgtaggtgctgtgggactcgagtccccctaccccgcttaatcgcattagtaattttatgaatttgtagtagtaataaaccaacatcattatcaaaacaaaatcagtttgctggaaatgtaagattctctagtcaaaatgttagtaaaaaaacacattaaacaggccataggaaaatgtttatatatagcctactaactgagctttctttattaattagtactctataaaagggacaatcaaagtggatcggaacaaatacaaccattgttagtggaacggctgacatgaacttgtaaaccatatttttgttaattaaagtaacttgatttgactacaagcatctctcatgtttgccccatattaatcaagaattgaatacaagtaaagcaacacactacttgaatatgtattggacgacagtccaatcaggcacatatatatggagaacaactttggcaatttgccataaagttgtctgattcaaatcaggagagaatgtttgctgcaaatgatcagatatgtacctttaatcaaccccccccccccctgaaaaacttgcatattacgcttgtttaggctatggcagattattccaagatcctgttcccaaatcaaacgatgaattctcgagagatttgcagggaattatctttatttgtggcttgatttattgtgactgtcgttcttgctttgcaggtggcatgtcgaaacgccaagcatcatagaggggtcagtgctgatcatgtccaagaccggggttggactctccatgtttagcatgggtacgtaattaaccaattaataatcagctatcacacgacttgatcattcctaacttcttttataataaatatgcagattaaattttttacgtaaaatgatgtggtattaacgtatgattgattgagttttaattattacaaactaaaaaaataaattaatataatattttagagcaactttcatatataaagttttcgcacgaaacacaccgtttagcggtttgaaaagcgtgtcacgaaaatttttatcttcatccaactcttgttggagaaatgaacgggacctaaggactaatgaacaagaaaacgctgtactctcctaactgaaatctgcatttgatttgtttgtgtttgtactctcctgtactgtgcaggtttgttcatggcgttgcaggacaagatcatcgtctgcggcgccggcctgaccgtgctgggcatggcgctgcggtttgtcgccggcccggccgccaccgccgtcggcgccttcgccctcggcctccgcggcgacctcctgcgtcttgccatcatacaggcatacacacatttacacgaaattcattcgccaagttctttttttcttctttcacctgaaatttgtctgaattcaaacggatgcatgcatgacacaagtcctcacgatgaaactgctcgtgatgaacaggctgcgcttcctcaatccatcacgacgttcgtgttcgcaaaggagtacggcctgcacgccgaaatactcagcacagcgtaagtagacaatcttatatacggtttaactggatttcactgaacttctttagtttgatctgcttcagtaccttctgtcaaatttatcttccagggttatattcgggacactggcgtcattaccggtgttgatcgtgtactacattgttctaggcttcatacgatga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0505400, RefSeq:Os09g0505400