Difference between revisions of "Os09g0515100"
(Created page with "{{JaponicaGene|
GeneName = Os09g0515100|
Description = Similar to Cdc48 cell division control protein 48, AAA family|
Version = NM_001070199.1 GI:115480140 GeneID:4347572|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0515100| | GeneName = Os09g0515100| | ||
Revision as of 21:02, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0515100 |
|---|---|
| Description |
Similar to Cdc48 cell division control protein 48, AAA family |
| Version |
NM_001070199.1 GI:115480140 GeneID:4347572 |
| Length |
6971 bp |
| Definition |
Oryza sativa Japonica Group Os09g0515100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:20713255..20720225 |
| Sequence Coding Region |
20713883..20714092,20715174..20715278,20715374..20717158,20717241..20717429,20717524..20717666 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:20713255..20720225 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:20713255..20720225 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtggggatggaagggaagggggatgcatcggtgacaccagtgaggactagtgaccggctgcgtaagcggcccaagtacttcggtcgcaattatatgtactacaatccagccatacgcaagaagatgaagtctaagaagagagcggctgcatcacagattgccaagaagctgcttcgcaagtcagctgccagggcaccgcctgctgattctattgcagcaaatctacgtcgttcaacacgaaagcgaagaatgtctgtaaatctggaggactatgacaccgatagttctagtatggaagatgatgatcttatgaggcccagatatcgatcttcaaagaataaagtggatgacgaagtgtcagctaggccaaagcgcaagaagctgtccaactctagctccattcctcgccgtgagggtttacggcctagaagatctatccgaggacaaagacttcatccataccaagaatctgaggatgaccaggaaagctctgaagaacagcctgcacaagataggagggaaaatggtaatgatatcgaagaggatggcaatgaggaggaagttgatggaggtgatgaagctgaagcggatggagatgatgaagatggtgaggaagaacaagaagggaggaggagatatgatctcagggatcgttcagaagttcgtagaccctccccacggaaggaagggaagcacagaacacaatcaccccgtagagtactagtacatggaattggtccaaagaacagcaaatatttgaaaaagggtggttcacgcatgcataagcgccctcgattctcattgccagatgattcagatgattctcttcttgtggatgagccagatgaaggtccatccatgccatggatgcgtggtgggagaggaggtatgccgtggtttttaggtggattggatatgcattgtccaggagcatggggtctgaatgttggagcatccggttggggtcatcagggtgacaacacagtgagtacttcttcacttatgccagggatccaaactgctggaccaagttccaagggaggagctgatattcagcctctccaggttgacgggagtgtgagttttaatgatataggggggctgtccgattacattgatgcattgaaggaaatggttttcttccctttgctttatccagatttttttgcaaactatcacattactcctcctaggggtgttcttctctgtggccctcctggtacagggaagacattgattgctcgtgccttagcgtgtgctgcctctaaagctggtcagaaggttagcttttatatgagaaaaggagctgatgttcttagtaagtgggttggagaggctgaaaggcagctcaagctactgtttgaggaagctcagaagaatcagccatcaatcatattttttgacgaaatagatggtttggcacctgtgaggtctagcaagcaagagcagattcacaattcaattgtttctacattgcttgctttgatggatggtctggattcacgtggacaagttgttttgattggagcaacaaaccgaattgatgccattgatggagcattgcgtaggcctggccgatttgatcgtgagttcttttttcctctacctggttatgaggcaagggctgaaatactggacattcatacacggaaatggaaggaccctccaccaaaggaattaaagacggagcttgctgcaagctgtgtggggtattgtggagctgatttgaaagccttatgtacagaagctgctattcgagcatttagggagaagtatcctcaggtctacacgagtgacgataagtttgtcattgatgttgattcagtcagggttgagaagtaccacttcttggaagctatgtctacaataactccagctgcacatagggggtcgattgtgcattcaaggccgctgtcaccagttatcgctccttgtctaaaaaggcatcatgaaaaaataatggaaagaattgctgatattttccctttcctatcatcagtagatgttagcaagttctctgccctttcctatggatcatccatccctcttgtttatagacctcgacttttgatgtgcggtggtgtgagtgttggactggatcatgttgggccagctgttttgcacgaacttgagaaattttctgttcactccttggggttgccgtctcttctgtctgatccaagtgcaaagacacctgaagaagctcttgtgcacatttttggggaagctaggagaacaaccccgtcaatactgtacttgcctcagtttcatctttggtgggatacggcacatgaacagcttagggctgtgctattgactttgttgaatgagctgccatccaaccttccagttttgttgctaggaacctcgtcagtggcctttggtgaccttgaagaagagtgtgcttccatattttcttctcgtaatgtatatgaagtggatcaaccaagtgatgatgatagaatgagatacctgcatgcactgtttgagtcattgctctcatttcaaatggaagagtctaggagtaagtctaaagaccagaagtcttctgttgatcttcccaaagcaccaaaggaagtggatggtcccaaactttcagagctaaaagcgaaggcagaagccgaacaacatgctgttcgacggatgagaatgtgtcttcgagatatttgtaaccgcattctgtacaacaaaaggttcaatgtgtttcacttcccagtatccgaagaggaggtacctgactatagatctgtagttcacaatcctatggatatggctactgtcttacagcaggtggactctgggcagtaccttactcgggcctcatttatgaaggacattgatcttatagtctcaaatgcaaagacatataatgggagtgactacaatggatctcgtattgtcagtagagcatgtgaactacgagatgtggtgcaaggaatgttgtcacagatggacccatctttggtgtccttttgtgataaaattgctgaacaggggggaccactacaggttacggatgatggagatagctctattcttcaagcagcgcctgttgctcagctggtatctggtactaggatgagcgcaaggcttcgtaatgtacaaccagaagtaaatctatcacgaagttatgaggcgttgaagcggcaaaagaaaagcaccgaaactgaacaaggcatggttaaagaatcgacaacaagagatgacaagtctcttggtgatgttgatttgtcaaagccaatctccccagaagaagctccaaaagaaccagattcaaatggtgttctgaaagaaactgacaatccaccaactgaattaccagaattaccggaactaaatcctgaacccatggtgactgacaacggtgaaaacgcggccatgcctgctagcgacgacatacctgaacaactggaagtcgtgaagcgacgcttcatggaactcaccacaggctatggcgtgccacagctcgaaaggctttgcacccgggtaatgaaaggcatgatagaattgagcggtaaagaaagcaacgaggatcataggcggttagtcgttaggtatttgttgacatttgttgagaacagcgacaatttttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MVGMEGKGDASVTPVRTSDRLRKRPKYFGRNYMYYNPAIRKKMK SKKRAAASQIAKKLLRKSAARAPPADSIAANLRRSTRKRRMSVNLEDYDTDSSSMEDD DLMRPRYRSSKNKVDDEVSARPKRKKLSNSSSIPRREGLRPRRSIRGQRLHPYQESED DQESSEEQPAQDRRENGNDIEEDGNEEEVDGGDEAEADGDDEDGEEEQEGRRRYDLRD RSEVRRPSPRKEGKHRTQSPRRVLVHGIGPKNSKYLKKGGSRMHKRPRFSLPDDSDDS LLVDEPDEGPSMPWMRGGRGGMPWFLGGLDMHCPGAWGLNVGASGWGHQGDNTVSTSS LMPGIQTAGPSSKGGADIQPLQVDGSVSFNDIGGLSDYIDALKEMVFFPLLYPDFFAN YHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQ LKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVL IGATNRIDAIDGALRRPGRFDREFFFPLPGYEARAEILDIHTRKWKDPPPKELKTELA ASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFVIDVDSVRVEKYHFLEAMSTI TPAAHRGSIVHSRPLSPVIAPCLKRHHEKIMERIADIFPFLSSVDVSKFSALSYGSSI PLVYRPRLLMCGGVSVGLDHVGPAVLHELEKFSVHSLGLPSLLSDPSAKTPEEALVHI FGEARRTTPSILYLPQFHLWWDTAHEQLRAVLLTLLNELPSNLPVLLLGTSSVAFGDL EEECASIFSSRNVYEVDQPSDDDRMRYLHALFESLLSFQMEESRSKSKDQKSSVDLPK APKEVDGPKLSELKAKAEAEQHAVRRMRMCLRDICNRILYNKRFNVFHFPVSEEEVPD YRSVVHNPMDMATVLQQVDSGQYLTRASFMKDIDLIVSNAKTYNGSDYNGSRIVSRAC ELRDVVQGMLSQMDPSLVSFCDKIAEQGGPLQVTDDGDSSILQAAPVAQLVSGTRMSA RLRNVQPEVNLSRSYEALKRQKKSTETEQGMVKESTTRDDKSLGDVDLSKPISPEEAP KEPDSNGVLKETDNPPTELPELPELNPEPMVTDNGENAAMPASDDIPEQLEVVKRRFM ELTTGYGVPQLERLCTRVMKGMIELSGKESNEDHRRLVVRYLLTFVENSDNF</aaseq> |
| Gene Sequence |
<dnaseqindica>629..838#1920..2024#2120..3904#3987..4175#4270..4412#4529..4774#5459..5645#5758..5823#5920..6166#6278..6696#ctctctctctctctcgcctccgcttcgaaacccccgacgcgaaggaagcgagacgaaaccctcgcgcgagccgcctccgccaccgccgcctccttccgaccagccgccgccgccgccgccgcgtcgccgaatccgggcgggggctaggcgcgggctccccgctccccgccgatcgaatccttcgaggttagaaacccccgcggccgccctccccccgggttttccggggctcccccgcgcttcgcttccgtccatttcggagggttttagttcgggttttgtggagtgggggtgtgtggtttcgttcgtggtgggtgggtttcgaggggtcgtggctgtctgatcggtgcttggcggcgtggattcggattttttttcttccatcgttttgtcattttcaacccattttctggggatttaatgtgtggggaatgaggagcgggttccatttcgcaatgtgcgagtgcgaaatttgccatcgttacatcttatccgtgattgttgaacttggtggatttgggggctagggtttggggattttactaaaattgacgggctattggtgtacctgtattgacttagggagcaatggccggcgtggtgtggatgaggacgtgaggtgggagcgatggtggggatggaagggaagggggatgcatcggtgacaccagtgaggactagtgaccggctgcgtaagcggcccaagtacttcggtcgcaattatatgtactacaatccagccatacgcaagaagatgaagtctaagaagagagcggctgcatcacagattgccaagaagctgcttcgcaagtcagctgccagggcaccgcctgctgatgtaagcatgcttgtcattctttgtttaatgagcctgtgaactttgtttccatattatgtgtgtgttcatgccactttatttaatttgttgtcaagctgatggaggtagtggtggtcttggtctttcattgcattgaagagtgcacttgagataattgagagggttgatagagtgatattggatttgcttggtattattgttagtgtttggtgtaagtaaatcagacttccattttgtaactgttaaatatttgtgatataaagtacggaggctgttgtgcttagttcagcattactgttgactttgatggtgttatgttagtaacttggttgaatttgttgggccgttgctgtatttggtcaaaatcgtcctatctttgctatattttttgttcatttatctgtatataactatatggatgttcaagttcaattcaatattgcctctgaaataaactggatagcttgcgcatttgcatggcctacttgaattaacttccttcctaatcaaatttcttgttctgcttcagccctttttataaaacaacatttttactaagagcattagctgttgctacttttagaaaatagtaatttcattgttcaatcaaagaggtgaccacatttccatcattgtaatgttacagcaaagttctaaagtgggttatgtattttttgttgctgtagatttagtagacgctctaagtttaaaaatgttcttacaggagccttttcttaccaagcatttaacaaatgacagttggtaaggcaatggttgatatttatataactcatctagcacctttatctacagaacattattttcttttatgaatgctgcacccatccttgtatccatgaccatagatttccgttgaatatttggagaaccagaaagcatgattgcttaaatatggagctttgacccttgttagattgttattgctcggtttcaagttgatacaaatcatgctcctttatgaaaaatctatttcctgcaaattttaactgtattgcctttccttcgtaagagttcctttgtttattctcatatggctttattataatagttctttttgtagtctattgcagcaaatctacgtcgttcaacacgaaagcgaagaatgtctgtaaatctggaggactatgacaccgatagttctagtatggaagatgatgatcttatggtgagtttgtggagtttcagagactagtgcacagtacatgcaaagtttgcttattattgtttttacctgctcacctcttctcttgaaattttcagaggcccagatatcgatcttcaaagaataaagtggatgacgaagtgtcagctaggccaaagcgcaagaagctgtccaactctagctccattcctcgccgtgagggtttacggcctagaagatctatccgaggacaaagacttcatccataccaagaatctgaggatgaccaggaaagctctgaagaacagcctgcacaagataggagggaaaatggtaatgatatcgaagaggatggcaatgaggaggaagttgatggaggtgatgaagctgaagcggatggagatgatgaagatggtgaggaagaacaagaagggaggaggagatatgatctcagggatcgttcagaagttcgtagaccctccccacggaaggaagggaagcacagaacacaatcaccccgtagagtactagtacatggaattggtccaaagaacagcaaatatttgaaaaagggtggttcacgcatgcataagcgccctcgattctcattgccagatgattcagatgattctcttcttgtggatgagccagatgaaggtccatccatgccatggatgcgtggtgggagaggaggtatgccgtggtttttaggtggattggatatgcattgtccaggagcatggggtctgaatgttggagcatccggttggggtcatcagggtgacaacacagtgagtacttcttcacttatgccagggatccaaactgctggaccaagttccaagggaggagctgatattcagcctctccaggttgacgggagtgtgagttttaatgatataggggggctgtccgattacattgatgcattgaaggaaatggttttcttccctttgctttatccagatttttttgcaaactatcacattactcctcctaggggtgttcttctctgtggccctcctggtacagggaagacattgattgctcgtgccttagcgtgtgctgcctctaaagctggtcagaaggttagcttttatatgagaaaaggagctgatgttcttagtaagtgggttggagaggctgaaaggcagctcaagctactgtttgaggaagctcagaagaatcagccatcaatcatattttttgacgaaatagatggtttggcacctgtgaggtctagcaagcaagagcagattcacaattcaattgtttctacattgcttgctttgatggatggtctggattcacgtggacaagttgttttgattggagcaacaaaccgaattgatgccattgatggagcattgcgtaggcctggccgatttgatcgtgagttcttttttcctctacctggttatgaggcaagggctgaaatactggacattcatacacggaaatggaaggaccctccaccaaaggaattaaagacggagcttgctgcaagctgtgtggggtattgtggagctgatttgaaagccttatgtacagaagctgctattcgagcatttagggagaagtatcctcaggtctacacgagtgacgataagtttgtcattgatgttgattcagtcagggttgagaagtaccacttcttggaagctatgtctacaataactccagctgcacatagggggtcgattgtgcattcaaggccgctgtcaccagttatcgctccttgtctaaaaaggcatcatgaaaaaataatggaaagaattgctgatattttccctttcctatcatcagtagatgttagcaagttctctgccctttcctatggatcatccatccctcttgtttatagacctcgacttttgatgtgcggtggtgtgagtgttggactggtagggcccctcatcctcttttacatagatatatcaccattttgtgtcctttcatatcattaatgtattttacgcttagcaggatcatgttgggccagctgttttgcacgaacttgagaaattttctgttcactccttggggttgccgtctcttctgtctgatccaagtgcaaagacacctgaagaagctcttgtgcacatttttggggaagctaggagaacaaccccgtcaatactgtacttgcctcagtttcatctttggtgggatacggttagtaagctccaagctgtatataatttagtgttgaaatgattgttggtaaatattgaataattgattatattcttcatctttgatgtaacaggcacatgaacagcttagggctgtgctattgactttgttgaatgagctgccatccaaccttccagttttgttgctaggaacctcgtcagtggcctttggtgaccttgaagaagagtgtgcttccatattttcttctcgtaatgtgtaagttcctggtcagatgctgttttgcttgacttggttcttctcaattgccaaggtctaaattatcctccaatattggtcttgtctttcattgagaaaatctgtttgtttgatagatatgaagtggatcaaccaagtgatgatgatagaatgagatacctgcatgcactgtttgagtcattgctctcatttcaaatggaagagtctaggagtaagtctaaagaccagaagtcttctgttgatcttcccaaagcaccaaaggaagtggatggtcccaaactttcagagctaaaagcgaaggcagaagccgaacaacatgctgttcgacggatgagaatgtgtcttcgagatatttgtaaccggtctgcaattcactcctttgttgagttccatatatgttcaaattttgtttctctgttctcaccattcattgctgttagcactgtggttagtttttacagttctgctaaagaacagtatagtttcatttatattctacaaaaacaccgcctagtttacacccatgaccatttttagcctatgcctatctatgctattcccgtctcagctccatatttattcagttgaaggaatgttccagatggggatttggttgcgttctaaaaatcaggagtatgcatttgcttgataaagcttatttttaggatggaatatatccttttgaaacataacttagctgcacttatgttactagtagaagtcgatgatgagtactgaaggtggctggaaaaaattgtggtggaaatcaataagcaaaactaagataagacatcagtcaaaattggaaaacttagctgtctagcatattcttcagaagcaatacctcaaatttgaatatgttcaataaagtttggagacaagccacagtgcaaattttttttacttagactactattgttttggagttttggacattattgttcaaaattagaagtaacaaagtgtacttagactactattgttttggagttttggacattattgttcaaaatcagaagcaataaagtgtctgttcctcttttcagcattctgtacaacaaaaggttcaatgtgtttcacttcccagtatccgaagaggaggtacctgactatagatctgtagttcacaatcctatggatatggctactgtcttacagcaggtggactctgggcagtaccttactcgggcctcatttatgaaggacattgatcttatagtctcaaatgcaaaggtatgaaattctcaatggagcatttaatgctccactccttttacatgtctgaagccgtgaccaaacttcttaactattgtttctattcttcgttgataatctgtttgtgcagacatataatgggagtgactacaatggatctcgtattgtcagtagagcatgtgaactacgagatgtggtattttatttattctaccacttatgtttgtagttgattatggactaggctcatctttgttatagtgttgtgtaactaatgggtctctttggtcaggtgcaaggaatgttgtcacagatggacccatctttggtgtccttttgtgataaaattgctgaacaggggggaccactacaggttacggatgatggagatagctctattcttcaagcagcgcctgttgctcagctggtatctggtactaggatgagcgcaaggcttcgtaatgtacaaccagaagtaaatctatcacgaagttatgaggcgttgaagcggcaaaagaaaagcaccgaaactgaacaaggtcagtgtacaacttcacatgatttttcttccttgattgtgattaatgcaattgcatatcaactcgtgatactagtgattgtataaagagttgaactaattcctgtttcaggcatggttaaagaatcgacaacaagagatgacaagtctcttggtgatgttgatttgtcaaagccaatctccccagaagaagctccaaaagaaccagattcaaatggtgttctgaaagaaactgacaatccaccaactgaattaccagaattaccggaactaaatcctgaacccatggtgactgacaacggtgaaaacgcggccatgcctgctagcgacgacatacctgaacaactggaagtcgtgaagcgacgcttcatggaactcaccacaggctatggcgtgccacagctcgaaaggctttgcacccgggtaatgaaaggcatgatagaattgagcggtaaagaaagcaacgaggatcataggcggttagtcgttaggtatttgttgacatttgttgagaacagcgacaatttttaactcggaacggtaataagatattaagattcttgttccccaatgtacattctctttgccacaaagaatagtagtggaacgccccctatgagagtcaccaccctgcttccatgatgtaagaaagtaacaaactaccagatgctcagtgtgtcagtgacacagttttgccatggatgtttgtagccagccttgtagattaaatcctgatcaatttcagcatcttgtaatgtgatggatgatgtacctctctttgcacaaatatattagcaaggtttctc</dnaseqindica> |
| External Link(s) |
