Difference between revisions of "Os09g0517600"

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(Created page with "{{JaponicaGene| GeneName = Os09g0517600| Description = Similar to FH protein NFH1| Version = NM_001070215.1 GI:115480172 GeneID:4347588| Length = 3295 bp| Definition = Or...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0517600|
 
GeneName = Os09g0517600|

Revision as of 21:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0517600

Description

Similar to FH protein NFH1

Version

NM_001070215.1 GI:115480172 GeneID:4347588

Length

3295 bp

Definition

Oryza sativa Japonica Group Os09g0517600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:20833356..20836650

Sequence Coding Region

20833576..20834708,20834818..20835017,20835130..20835374,20835588..20836376

Expression

GEO Profiles:Os09g0517600

Genome Context

<gbrowseImage1> name=NC_008402:20833356..20836650 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:20833356..20836650 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgcgcggtggctgctcgtgctgctcctcttgctgcctgtttcttggtgtcatcaagatcggcatggccgccgccattacccgcggcggtggaggagcagcggcagtaggagggagctgcacgagccgctgttccctctcgagaacgcgcccgcgctgccaccgccgccgccgccgccaccggcgccgttctttccgttcttgcctgactccgccccgccgcagctgccaccgccggtgaccacgcccgctcccgccggtggcgccggagatggtggtacggacgcaggcgccgccgccaccggggacgcgtcttcgtcttcgtcctcgtcggcgtcgccgcaccccacggcgccggcgaacatctcgtacatggccatgcccatctaccactccgcgccgctccgctccttcctgtcgtcgcaccgcctcctcaccgtcctcctcccggtcgccgccgtcctcgccgccgtgctagccgcggcgctcgtctacctcctcacgcgacgccgccgctgctccaagggggagccgcacgcggcgcatacgaaggccgtgctgctttccccggggaactccacggcgctctacgacggcgaccacgaccagcatggccgggggtccaccgccaccgcagcctccagcgccagctcgccggaactccggccgatgccgcctctaccccggcagttccagcagacgaggacgagcatgccgtcaacttcgcaaaccatccatgaagccggagcagaggacaagcgagcgccgccaccgcagagtgttcgaccgccgccgccaccaccaccacctcctcctccgccgccaatgccgccgagaacggacaacgcgagcacgcaagcagcgcccgcgcctcccccgccattgccgcgagccggcaacggcagcggctggctgccacggcggtacacggagcgcgccgcgccgacggtgatcagggcctcggcgggggcagtccacccggaggagtcgccggcgcgcgcctcgccggaggagaaggccgccgacgcggccgctcggccgaagctgaagccgctgcactgggacaaggtgcggccggcgagctccggccggccgacggtgtgggaccagctgaaggcgagctcattccgagtgaacgaagagatgatcgagacgctcttcgtctccaactcgacgaggagagcatccaagaatggagtcaaggaggcaaatgcagcttgctgcaaccaggagaacaaggtgctggacccgaagaaatcgcagaacatcgcgatcatgctgagggcgctcgacgcgacgaaggaggaagtctgcaaggctctcctggatggccaggcagagagccttggaactgagctgctggagacacttctaaagatggctcctagcagagaagaggaaatcaagctgaaggaattcagggaggatgccgtatctaagctcggccctgccgaaagcttcctcaaggcggtgcttgcgataccatttgcgttcaagagggtcgaagcaatgctctacatcgccaacttcgattcggaggttgactacctcaagacctccttcaaaactcttgaggcagcatgtgaagagctgaggggcagcaggttgttccacaagatcttagatgcagtgctgaagaccggtaaccgcatgaacactggcaccaaccgcggaaatgcaagcgccttcaagcttgatgccctcctcaagttagtcgacgtaaagggtgcagatggcaagacaacccttctgcattttgttatcgaagagattgtcaagtccgaaggtgccagcatcttggccactggccaaacatccaaccaggggagtgccattgcagatgatttccagtgcaagaaggttggcctcagaattgttgctagccttggtggtgagctcggcaatgtcaagaaggcagctggaatggactcagacacactggccagctgcgttgccaagctttctgctggtgttagcaagatcagtgaggccctgcagctgaaccagcagctcggttccgatgatcattgcaagagattccgcgcctcaatcggtgagttcctgcagaaggccgaagctgagatcaccgcagtgcaggctcaggagagcctcgccctctccctcgtcagggagacgaccgagttcttccacggtgactcggtgaaggaggaagggcaccctctgagaatcttcatggtggtgcgcgacttcctcaccgttcttgatcatgtctgcaaggatgtcggcaggatgaacgaaagaacagcgattggatcttcgctccggctggagaatgcacctgttcttgcgaggttcaacgcagtccaacccagtagctccgaggaggagagctcatcgtcctag</cdnaseq>

Protein Sequence

<aaseq>MLARWLLVLLLLLPVSWCHQDRHGRRHYPRRWRSSGSRRELHEP LFPLENAPALPPPPPPPPAPFFPFLPDSAPPQLPPPVTTPAPAGGAGDGGTDAGAAAT GDASSSSSSSASPHPTAPANISYMAMPIYHSAPLRSFLSSHRLLTVLLPVAAVLAAVL AAALVYLLTRRRRCSKGEPHAAHTKAVLLSPGNSTALYDGDHDQHGRGSTATAASSAS SPELRPMPPLPRQFQQTRTSMPSTSQTIHEAGAEDKRAPPPQSVRPPPPPPPPPPPPP MPPRTDNASTQAAPAPPPPLPRAGNGSGWLPRRYTERAAPTVIRASAGAVHPEESPAR ASPEEKAADAAARPKLKPLHWDKVRPASSGRPTVWDQLKASSFRVNEEMIETLFVSNS TRRASKNGVKEANAACCNQENKVLDPKKSQNIAIMLRALDATKEEVCKALLDGQAESL GTELLETLLKMAPSREEEIKLKEFREDAVSKLGPAESFLKAVLAIPFAFKRVEAMLYI ANFDSEVDYLKTSFKTLEAACEELRGSRLFHKILDAVLKTGNRMNTGTNRGNASAFKL DALLKLVDVKGADGKTTLLHFVIEEIVKSEGASILATGQTSNQGSAIADDFQCKKVGL RIVASLGGELGNVKKAAGMDSDTLASCVAKLSAGVSKISEALQLNQQLGSDDHCKRFR ASIGEFLQKAEAEITAVQAQESLALSLVRETTEFFHGDSVKEEGHPLRIFMVVRDFLT VLDHVCKDVGRMNERTAIGSSLRLENAPVLARFNAVQPSSSEEESSSS</aaseq>

Gene Sequence

<dnaseqindica>221..1353#1463..1662#1775..2019#2233..3021#gctcccctcgcctacccacagctgttcacatcactcccgctcctcgagaacaccactccctcctactagtagcttctctctctctctcttcttcttcctcgctttgcttgggttgggttggagcggtgagacgagagattgaggggaggagaggagaggacagcagctgcccctcgattcgattcttgagtgatcatcttgggcttgggcgttggcgccaatgctcgcgcggtggctgctcgtgctgctcctcttgctgcctgtttcttggtgtcatcaagatcggcatggccgccgccattacccgcggcggtggaggagcagcggcagtaggagggagctgcacgagccgctgttccctctcgagaacgcgcccgcgctgccaccgccgccgccgccgccaccggcgccgttctttccgttcttgcctgactccgccccgccgcagctgccaccgccggtgaccacgcccgctcccgccggtggcgccggagatggtggtacggacgcaggcgccgccgccaccggggacgcgtcttcgtcttcgtcctcgtcggcgtcgccgcaccccacggcgccggcgaacatctcgtacatggccatgcccatctaccactccgcgccgctccgctccttcctgtcgtcgcaccgcctcctcaccgtcctcctcccggtcgccgccgtcctcgccgccgtgctagccgcggcgctcgtctacctcctcacgcgacgccgccgctgctccaagggggagccgcacgcggcgcatacgaaggccgtgctgctttccccggggaactccacggcgctctacgacggcgaccacgaccagcatggccgggggtccaccgccaccgcagcctccagcgccagctcgccggaactccggccgatgccgcctctaccccggcagttccagcagacgaggacgagcatgccgtcaacttcgcaaaccatccatgaagccggagcagaggacaagcgagcgccgccaccgcagagtgttcgaccgccgccgccaccaccaccacctcctcctccgccgccaatgccgccgagaacggacaacgcgagcacgcaagcagcgcccgcgcctcccccgccattgccgcgagccggcaacggcagcggctggctgccacggcggtacacggagcgcgccgcgccgacggtgatcagggcctcggcgggggcagtccacccggaggagtcgccggcgcgcgcctcgccggaggagaaggccgccgacgcggccgctcggccgaagctgaagccgctgcactgggacaaggtgcggccggcgagctccggccggccgacggtgtgggaccagctgaaggcgagctcattccggtgagctccccacgcgatatcgcttcttggtgattggatttagcagcagccatgatcacttagctctgatactgaagagctgcaatcttgtttgcttgtgtatgagcagagtgaacgaagagatgatcgagacgctcttcgtctccaactcgacgaggagagcatccaagaatggagtcaaggaggcaaatgcagcttgctgcaaccaggagaacaaggtgctggacccgaagaaatcgcagaacatcgcgatcatgctgagggcgctcgacgcgacgaaggaggaagtctgcaaggctctcctggatggtgagctgagatattggcaatgataatctttagaatttgagctaaccctgcattcagagaatgctttgtctgatcgtcaagtttctgaacatttcgccattgttgggagcaggccaggcagagagccttggaactgagctgctggagacacttctaaagatggctcctagcagagaagaggaaatcaagctgaaggaattcagggaggatgccgtatctaagctcggccctgccgaaagcttcctcaaggcggtgcttgcgataccatttgcgttcaagagggtcgaagcaatgctctacatcgccaacttcgattcggaggttgactacctcaagacctccttcaaaactcttgaggtactagttatgtcctgccttgtcctagcaggttccattagttgttttgaatgaaatagaagtacaaatatgctctgagtcgaatcaaagtcggtgcagttttcccgagtttcatgttactacagttaataggaatagggtgaagagcaatttattggcaacattatgagttacggatgatgaagatgttgcaactgtgcattgctattgcaggcagcatgtgaagagctgaggggcagcaggttgttccacaagatcttagatgcagtgctgaagaccggtaaccgcatgaacactggcaccaaccgcggaaatgcaagcgccttcaagcttgatgccctcctcaagttagtcgacgtaaagggtgcagatggcaagacaacccttctgcattttgttatcgaagagattgtcaagtccgaaggtgccagcatcttggccactggccaaacatccaaccaggggagtgccattgcagatgatttccagtgcaagaaggttggcctcagaattgttgctagccttggtggtgagctcggcaatgtcaagaaggcagctggaatggactcagacacactggccagctgcgttgccaagctttctgctggtgttagcaagatcagtgaggccctgcagctgaaccagcagctcggttccgatgatcattgcaagagattccgcgcctcaatcggtgagttcctgcagaaggccgaagctgagatcaccgcagtgcaggctcaggagagcctcgccctctccctcgtcagggagacgaccgagttcttccacggtgactcggtgaaggaggaagggcaccctctgagaatcttcatggtggtgcgcgacttcctcaccgttcttgatcatgtctgcaaggatgtcggcaggatgaacgaaagaacagcgattggatcttcgctccggctggagaatgcacctgttcttgcgaggttcaacgcagtccaacccagtagctccgaggaggagagctcatcgtcctagccgttggagcctgcatgttattgtctgaagaaaagcaatgcaggctaggactttagaatcacataagtattttgtaactgtagcagataagtgtagatcaaagtctatatgtactagtacatgattcagcatgctaagcatcatcccagccaatggcctaccaaaggtgaaagtggcattgtacatgattcagcatgctaagaatcactagacaggagcttttgtgatcatgctgaatgcttgaatctcgtgataaaagtaaagtactcctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0517600, RefSeq:Os09g0517600