Difference between revisions of "Os09g0538800"
(Created page with "{{JaponicaGene|
GeneName = Os09g0538800|
Description = Similar to Synaptotagmin C|
Version = NM_001070335.1 GI:115480412 GeneID:4347715|
Length = 9597 bp|
Definition = Or...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os09g0538800| | GeneName = Os09g0538800| | ||
Revision as of 21:03, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os09g0538800 |
|---|---|
| Description |
Similar to Synaptotagmin C |
| Version |
NM_001070335.1 GI:115480412 GeneID:4347715 |
| Length |
9597 bp |
| Definition |
Oryza sativa Japonica Group Os09g0538800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22044982..22054578 |
| Sequence Coding Region |
22045271..22045399,22045505..22045636,22045753..22046106,22046196..22046442,22046524..22046600 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22044982..22054578 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22044982..22054578 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggtgtgattagtacggtgcttggtttctctgggtttggctttggattctccgctggtattgtcatcggatactacttcttcatctacttccagccaactgatgtcaaggacgtcaaagttcgcccacttgtcgaatatgactcaatatcgttggacggtatccttcctgaaattcctttgtgggtcaagaatcctgactatgatagaattgattggctgaatagatttttggagatgatgtggccttacctcaacaaggcgatctgcagaactgcactggatattgcaaagccaatcattgaagagaacaggaagacgtataaactagaatctattgagtttgaatcacttacattgggtagcttaccacccacctttcaaggaatgaaagtgtatgtcacagaagaacaagaattgataatggaaccatctcttaagtgggctgcaaatcccaatgtcactgttgttgtaaaggcttatgggttgaaagcaactgtccagattgtggatctgcaagtctttgcttcacctcgtattactctgaagccattggtccctacatttccttgcttcgcaaaaatccttgtttctctcatggagaagccacacgttgacttcgggctgaaacttttcggagcagatttaatggctatccctggtctttacagatttgttcaggagaccataaaaaagcaagttgcgagcatgtatttgtggccaaagacattggaagttcccataatggatccctcaaaagcttctaagaagcctgttggaattctacttgtgaaagttttaagagctcaaaacctgcgaaagaaggatctgttgggtaaatcggacccatatgtgaaacttaagatgtcagatgacaagcttccgtccaagaaaacaacagtgaagcgtagcaatctcaatccagagtggaatgaggatttcaaatttgttgtgacagaccctgaaactcaggcactggaaattaatgtctttgattgggaacaggttggcaagcatgagaaaatgggcatgaacaacattctgttgaaagaacttcccgcagatgagactaaagtcatgactgttaacttgcttaagacgatggatcctaatgatgtacaaaatgagaagtcccgtggtcagcttactctggaggtgacatataagcctttcaaggaagaggatatggagaaagaaggcatcgataatgctgatgtggtggagaaagctcctgatggtactccagctggtggaggactgctttatgttgttgttcatgaagctcaagatcttgaaggaaagcatcacacaaacccatatgcaaagataattttcaaaggagaagagaagaaaacaaaggtaatcaagaaaaacagggatccacggtgggaggacgaattcgagtttgtatgcgaggaaccccctgtaaatgataaactgcatattgaagttctaagtaaagcttcaaagaaaggattgatacacggcaaggaaaccttaggctacattgatataagcctcgcagatgtgatcagcaacaagcggatcaatgagaagtaccacctcattgattccaaaaatggtcagattcagatagagatgcagtggagaacttcatag</cdnaseq> |
| Protein Sequence |
<aaseq>MGVISTVLGFSGFGFGFSAGIVIGYYFFIYFQPTDVKDVKVRPL VEYDSISLDGILPEIPLWVKNPDYDRIDWLNRFLEMMWPYLNKAICRTALDIAKPIIE ENRKTYKLESIEFESLTLGSLPPTFQGMKVYVTEEQELIMEPSLKWAANPNVTVVVKA YGLKATVQIVDLQVFASPRITLKPLVPTFPCFAKILVSLMEKPHVDFGLKLFGADLMA IPGLYRFVQETIKKQVASMYLWPKTLEVPIMDPSKASKKPVGILLVKVLRAQNLRKKD LLGKSDPYVKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVTDPETQALEINVFDWE QVGKHEKMGMNNILLKELPADETKVMTVNLLKTMDPNDVQNEKSRGQLTLEVTYKPFK EEDMEKEGIDNADVVEKAPDGTPAGGGLLYVVVHEAQDLEGKHHTNPYAKIIFKGEEK KTKVIKKNRDPRWEDEFEFVCEEPPVNDKLHIEVLSKASKKGLIHGKETLGYIDISLA DVISNKRINEKYHLIDSKNGQIQIEMQWRTS</aaseq> |
| Gene Sequence |
<dnaseqindica>9180..9308#8943..9074#8473..8826#8137..8383#7979..8055#7499..7573#7325..7426#7097..7215#6560..6683#6413..6463#6199..6297#5595..5705#acttttctcagcacgtagtggtcggccgagagcctcgtcgaagagggcgctgccgccatcccgttcccggcgaccgccgccgccgcaggccagtagtcgttgagcagcatcttgatgccgtccaccagttgcattgcacccacgagcggcgcctgctgctgcacggctatcagctcggcgtcgctgaacaccttgcggcaagcggccgttgacctcgacgccgccaccgccgccgccgccgccgcacgtgctctctctgcagtctgcgctgcgtcagctctcgccgcgcgtcggctctccggcatcgaccctgccaaatccttccttctgctcgctccccaaggtacacccgttgcggctttctccgttctgcttgctgctcggctgcaccgcaaataggagcatttcacttcttctcttacttagaaagaaccaaacaatcaatatgcgaatcacatgctcactgatctctccgctaaatcaacacacacatatcaaagattttcaccatcggttgctatgctcctcccatcagattggatttgcatatgtttgtttcttgctgacactgtggcgccaccgcgccgccgacagcgcccctggaccctggtgagagagagaaagagcgagggggatctgagagtgggagtcgccgacagcgccgctcctccccggccgcccgcacgctgcttctctaccggccgcgcgccaccccttccccgcagcccgtctgcagctcctcccctcgctgccgcctcgtgggcggctgccggcgggtgagcccgcgcgccgtccctccccggccgcccgcccgcagctcctcccccaccgccgccgcgtcgccagtagccgccatcaccgccgtcgcgtcgccagtcgccggctgccgacgccctcctctcccgtcccgcctcgcactacggcctcgcagaggatggagagagagatgaggaagggagaggggagaggaaaagggagataatgatgatgtggccacgctgacatgtgggtccatatgagtttcacgctactcagcgccacgtcggacaaaaccgaaatcaaaaccaccaaaaaaaaatctcaaacgaaaccgttcggtttagttagttgagggacgttgtggttgggggacaattttgtaacccgatgacaagttaagttgaggtatcttcggtgtactttttcctttattagtagatcctgttcgaatccgacgtttgctttcacgagagaatgggcctgaaggaaggggagcaaggtcgttgtcgaacaattcgagggcctatccaatccgacgcaacgctgccgacacaggacagcttcaaaggtgtctgcagtctgcatgattatacacccccagtatgcgccattccaccgaggagatagcgagatgcattttgtcctgaaaacgaactatggcctgatggagacatacactgttcttaccacacacaagtattatatgagttccgaggaaattacgcatatcaagcagaattttggccctttctgcgtcaaggagagtagcgagtttttttctggctgggaaacgtctcacgacttggagcatccacgtcgtctttgctctgttgcacgacgcgacacgaccgatcaatccgttgtctgcatttggatcatgaaaataacgccctgatttgactggtcgggtgatgaaccggtggtacgtgcgtggctgctactgacctggttgctaggccatgcaaatgcctccgattttctgctgtcgaaattttaatttaaaattgtcgagagtagtttatttttcagtttaaaattgcttaggtataaatataaagttttccttagaaattagtttttattactaataaggtatttttacggcttatcagcttaaggccgccaaactaatggccaaaatgaaatgcagagacatgctctttatttgttcgttgccatttggcaacctcgcatgtaaccaaaattgatggtctacttgtttcaaaaaaattgatggtctacgtgaaaagcagattaagaaaacagatagataggaaaagcatacttcttccattttataatatacggagtaatagcctagcactagataaaatatatcatactacgaaactaaatagacttgctatctagattcattatactaatatatatcccatccaatactaatctttctctttcataaaaaaccaatcaaatacacagtgtggcatattctacttgaatatcgacaacctcatgtccacgtagtagtactatgatgtgtcacattatgtcctgattagtattttatagaacgaaagaattagacttttatattttgagacatgtgtactatgattttaatagaaatataagggtaaacagagaaccgcaaaaaaaaaaaacaagaatcaccgtttgaacggatcataggaaaaacacaagaaattgaaagaaaacaacttcgatggaaaaaaacatcaaatcaagttgtaaaattctgtagcgtcttataagctacatagaaatcgagaagagcatataactttagaccctgtttagatgggactaaaactttaagtccttatcacatcggatgtttggacactaattataaatattgaatgtagactattaataaaacccatccataatcttggactaattcgcgagacgaatctgttgagcctaattaatccataattagcctatgtgatgctacagtaaacattatctaattatggattaattaggcttaaaaaattgtctcgcgaattagctttgatttatgtaattagttttgtaagtagtctatatttaatattctaaattagtgtctaaatacagggactaaagttaaagttaagtgtctggatccaaacaccaccttagatagaaggaaaaaaacccatgtatagaatgtctcttcatacagactctatataaactaaaaaaaattggaataatctaatccgatgacacacgggaaaaaccctgagggcatgtacaaaggtagagtctaatatgagctctctatactaattaatatcactaaagacaatcctcctataatagtagaggtaataagatttctaaaccattaatgtatcaaataattttttattatacttatttccttttctccaccctcatgcaacaaattttccattatgctaagagtccactctgagctgttatcatgcgtagcaacgatatttctcatttcttccatctctttcttccacgtcaccaaatttacttgcataacagtgaagagagcccattattacataccattgtacatgcactgatggaatcatacatataaaaagaagaaaccatgactgtccattacctaaaaacgaggtaagatgcctgtttgttttcctctaaaatttctataagtggaggagattaatttcagaactaatataaattctggagggtgggattatccgaacacggttcatttcactttcagaactaatataaatcctcgagggagggattaaccgatggttcatttcacgggattttcaatgaaaatttcgaggaccaatcatttgctgcgaataactacatcggaattttatgattcaaatcctaaaaaaaaatcctttccctttcatacgttcgaaaggatcctttttaaaacacttcacgcaaatttcgctgatttttggtactgcacgacacaagacaagaaaaggtttgaactacaaaagttggggggggggggggggggcagatgagccagggaggaccatgaccatccccggtccccacacgtcggcgtccccgagatcactcatccgactccaccacagttcacacttcacacccatccagcagcaggcaggagaggagaggagaggaaacaaatcaaactcgcttcgcttctttaattaggcactcgtctccctcctccctcttccaccccccccccccccccccccccacacacacacaccttggatcgcggcctcacgcgcgtgaggcgccgcaacgcaacgtgcgaccccgacctctcctcctccacctcggcttccccccaaattccatctcctcgcctcggcgaatccgattccgagcactcacaaccggatcggagcgagttccatggcctgaatctcagggggggtgactggccgaggagcgggctctctctctcactggttcgtctcctcctcttcctcttccccgactgctcggatcggtcgtcgttctcgcgttggggggcgatctaggtttttgttcgttgcctggatttttgggctgttgtaggattggatgggagtttttgatttttgttgggtgttttctcgtctgtccggttgcggctaaagttggattcgtctagggttttttttttcccactgtaggatcgattttgaatttttgatccgtgcaatcgtaggggcggattgggttcaccatttttggggtacattttcgtgcgacttttttttatttgctggcgattaacgtcgatttgagacaattatcgaatcatgtcttatttaggagaaacatgcatgaagtgagtcagtgaattcggcaaaactaatttgcttccgtttggaattacctttcgtatgtgaacactgtgcgcggatgtgttgtttgagcaatattatgaataatgtaaatttgtgaatctagcatagataaactgtgcaattcatttcatgtttttggttgaattctatttaatcgaacaagagaaaatttcacactctgtaacaatattctctgtcctacctccaagcgaactttattctcttttttttcacaagcagatcccaccactatattttgttgaaatcttcagtttggtgtacagcggatttgctctaatacgaaacccaccccaaaagcaaagattaaagcgccaaccccacagccaagcaagaaaccatccgtaaagcacacctttgatgttcttttcttccaccacttgaatccaccttttgtcttctcgcttaattatttaattaaaacattgcaactttgggtggttccagcctatattattctgaaatctgcattatcatttttaaagtttacaagttttctcttcaccatatgactatatcttcttgttaccgaaccaattggcattagctgtgctaaactttgtttctatcagtctcctgcaggtcgttttcactattttttattaaaagaactttcaacatgtacttttttttttgggtgatatgcgggtgaaggttactttcatactgtcgtactaggggggaaatcttgattgatgggcccctccagtttctaatgttggaagttgctccatgttgctttctgcaatttgttcaaatctgtttgctctgaattttgcttatgccgggatattttgatgctctcacgcaaaaagctgaatagagtattttcaccaaaaaaaaaaaagaggaggtacgagctagtgatagggatctggctagaccacttgttgttctctcatgattcagctgaatgaagtgtttcaattgattaatttacctgagtgtaagcctttgtttcatcttccgacatgtttgatttttgcagccttaggctgaaatctgctataactttggaggtactaaaacgagtctgagatgggtgtgattagtacggtgcttggtttctctgggtttggctttggattctccgctggtattgtcatcggatactacttcttcatctacttccagccaactgatgtcaaggtgcacatctatatttcaatgattctcttcctttcatactgtataaaattttatcatattgtcatataatgaatacttgtgttgtggaatgtgtggtgctgcttattaacagatgtctacaccttacaaccaaaatggcctgggaacagtttggctcttgctgttacagaaaataatttgacgacggaggcattgatgaactcatttagttttttgtgaagtcctaattcagttagtctcaaccacatactgttaatatgccatatataagcatctattattttatttgggtgtttaaacgatatctttcatgattttcaaataaaggcaacctttcagttggtgtatgatgacctattacactatatatatgcatgtacatgtccattgataccatatgtactggaacggcacacatttgagtttttcttggtgtaatgcaccatattgttgtgctgcatgggggtaatttcttcctctgattgcctttcaggacgtcaaagttcgcccacttgtcgaatatgactcaatatcgttggacggtatccttcctgaaattcctttgtgggtcaagaatcctgactatgatagagtatgcttacccattctttaaactatcatctactcgctgaagaaaactcatgcacttgaacagcatcaatgctagcttatctcatatttctcatcttcctcttattctttgttagattgattggctgaatagatttttggagatgatgtggccttacctcaacaaggtacccttatcttgctgtagactacaccaagtcaccaagaatgaaatggatctctctgattgacaatagaaactttattgtgcatttatcctgtaggcgatctgcagaactgcactggatattgcaaagccaatcattgaagagaacaggaagacgtataaactagaatctattgagtttgaatcacttacattgggtagcttaccacccacctttcaaggttagtgcactttctcattatatacatgcatacatatgtagttcacatgtcttttccttagaagtggcccttgtttctgtatattgtgcaaacagttgtgttcatatcaacttgttttacgatcaactgtaatcaaatcagcatcagagtagttatggtttgcatcgctggagatatagaatatgaatgcattgctactactttgttcccactaagctgtcatactatgtttttatgaccaactctatgcattatagccataggtctgtacagcttgtttattacttattgtaagttaatgtcatatggacatcaccataaacatgtatggtggacaataatgttctatgtgctcagctctctttgtaccctggcattacactgaatctgttgtatgatatttgcttctccaggaatgaaagtgtatgtcacagaagaacaagaattgataatggaaccatctcttaagtgggctgcaaatcccaatgtcactgttgttgtaaaggcttatgggttgaaagcaactgtccaggttttttttttgtcatgggctgaagtagtaattggtgttctcattatgtgatatgatatagaattgagctaattaagttattcattgttcatgtgaaacaaaatttcagattgtggatctgcaagtctttgcttcacctcgtattactctgaagccattggtccctacatttccttgcttcgcaaaaatccttgtttctctcatggagaaggtctgatatctgatcgcttgtatgtttattaccctgctggcaaccttcttactagttatgttggtttggcagccacacgttgacttcgggctgaaacttttcggagcagatttaatggctatccctggtctttacagatttgttcaggtattcctgactcctactttgagccttcttatgcgaaagtttgttggtctatggtgttgagattttcattagtttgctagaaatacgtagagctaaagtgagccgtcatgaaagaactgctacagttcttttaacattcacagcaaacttgtaatgtggtactgtaacttgcttctgttattggtctacacgtgcttagacttagattcgtacacacattcttatgtagcaaaagcaagatatttcttgtttgctataatttcatatcctatagccttgagcccttgacttgatgttatttgatggtgtctatcttagccattacagtggatgtgccacagactgcctcactccattcagtacaagtagttcatattttgaccacttccatttgtgcatttgcaggagaccataaaaaagcaagttgcgagcatgtatttgtggccaaagacattggaagttcccataatggatccctcaaagtacattatctatcacttagtctattatttgtttgtatgcagtttttgagatgccacattaatggttccatctatttgcagagcttctaagaagcctgttggaattctacttgtgaaagttttaagagctcaaaacctgcgaaagaaggatctgttgggtaaatcggacccatatgtgaaacttaagatgtcagatgacaagcttccgtccaagaaaacaacagtgaagcgtagcaatctcaatccagagtggaatgaggatttcaaatttgttgtgacagaccctgaaactcaggcactggaaattaatgtctttgattgggaacaggtatggaccgcttcattaatgaaatccgctacttttttctgcattttttataccaaaaaagacatgattatttcttttgatgtatacaggttggcaagcatgagaaaatgggcatgaacaacattctgttgaaagaacttcccgcagatgagactaaagtcatgactgttaacttgcttaagacgatggatcctaatgatgtacaaaatgagaagtcccgtggtcagcttactctggaggtgacatataagcctttcaaggaagaggatatggagaaagaaggcatcgataatgctgatgtggtggagaaagctcctgatggtactccagctggtggaggactgctttatgttgttgttcatgaagctcaagatcttgaaggaaagcatcacacaaacccatatgcaaagataattttcaaaggagaagagaagaaaacaaaggtactaatatcttgcaaatattattcacttgaacatctgcactgaaattgtttgtggtatgatctcatgtgcccccccccccccccaacctataaaattctacctcaattttgtaggtaatcaagaaaaacagggatccacggtgggaggacgaattcgagtttgtatgcgaggaaccccctgtaaatgataaactgcatattgaagttctaagtaaagcttcaaagaaaggattgatacacggcaaggtatttgttttgtgcctggaagttctgtcccatgccaacattttactttctcgacttgtgcatgatgaatatcagaatcactgatgagtattttaatttattcaggaaaccttaggctacattgatataagcctcgcagatgtgatcagcaacaagcggatcaatgagaagtaccacctcattgattccaaaaatggtcagattcagatagagatgcagtggagaacttcatagcaaccgtgatgaagtaggtgaaatgcttgaacttcgtgagatacaggatgatacatatgaatgttgttgctacaaacagagtttggccaatacctgtgattgagttctgtagatatttacttctttgtgtccaggcatctgttttaccttgttgagatattttgttattttttcaaaattgtgttgagaacaacgtagaagcaaccatgctattggcatcggaagtggaattagatgtgagatgtaatgacccattatccttcaatgcagataaacatagaattctggc</dnaseqindica> 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| External Link(s) |
