Difference between revisions of "Os09g0542700"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0542700| Description = Similar to UL36 very large tegument protein| Version = NM_001070358.2 GI:297609890 GeneID:4347742| Length = 2607 bp|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0542700|
 
GeneName = Os09g0542700|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0542700

Description

Similar to UL36 very large tegument protein

Version

NM_001070358.2 GI:297609890 GeneID:4347742

Length

2607 bp

Definition

Oryza sativa Japonica Group Os09g0542700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22207455..22210061

Sequence Coding Region

22207455..22207781,22209759..22210061

Expression

GEO Profiles:Os09g0542700

Genome Context

<gbrowseImage1> name=NC_008402:22207455..22210061 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22207455..22210061 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccgccgcggcggaggaggcggtggtggtggtgaggggggcgccgccgccgccgtcgtcggggaagaggaggtccaccacgctgctgcacctcttccagctcgagaagcccgacgtcgtcgttggtgcgatgctgctcccgccgccgtcgccggagcccgaggaggatcgtctgatcaccaagatcgagtcgtgcagccgggtcttcacgttcgtcgatggtggcggcgccgcagggggggagtccggcgaggagagggacgcgaagacggaggcgctcggtgaggtgctcgccgcggtggcggagagggcgctgtacgtgtggaacaacgagcggttcgtggcgatggcgtgcgcggcggggccggcggcgatggaggagcggatcctgccggcgttcgtggcgagcatggaggctaacctggagcggcactggagcaggtgcgtgcagcaggtgacggccagcgtgcgtgcgctgcttgaccgggtggcgccgggggcctacgcccgctgcgccgccggcctcgccgcgcgcctggccgaggccgacgccgacgccgccgcgcgccgcgcacggtggcgccgcctggagctcgccgccgacgccggcgccgatgccaagtag</cdnaseq>

Protein Sequence

<aaseq>MGAAAAEEAVVVVRGAPPPPSSGKRRSTTLLHLFQLEKPDVVVG AMLLPPPSPEPEEDRLITKIESCSRVFTFVDGGGAAGGESGEERDAKTEALGEVLAAV AERALYVWNNERFVAMACAAGPAAMEERILPAFVASMEANLERHWSRCVQQVTASVRA LLDRVAPGAYARCAAGLAARLAEADADAAARRARWRRLELAADAGADAK</aaseq>

Gene Sequence

<dnaseqindica>2281..2607#1..303#atgggcgccgccgcggcggaggaggcggtggtggtggtgaggggggcgccgccgccgccgtcgtcggggaagaggaggtccaccacgctgctgcacctcttccagctcgagaagcccgacgtcgtcgttggtgcgatgctgctcccgccgccgtcgccggagcccgaggaggatcgtctgatcaccaagatcgagtcgtgcagccgggtcttcacgttcgtcgatggtggcggcgccgcagggggggagtccggcgaggagagggacgcgaagacggaggcgctcggtgaggtgctcgccgcggtgagggcgagcgggaagaggaagcaggggctggaccaccgggtgatggtggcgctggtcaagatggtcgccgccaacctgttccgggcgatgccgccgtccgcctacccgtcgtcgctcccgccgccgtccgacgtgctcgacgacgaggtccccgtgatggtgctgctcccgtcgtggccgcacctccacctcgtctacgacgtcctcaccgccgccgtcgccgcggcggacgccagggcgctccgcaaccacgtcgaccggagcttcctcgccggcctagtcaccctcttcgcctccgaggacccgcgtgagcgcgaccgcctcaagaccgcctaccacctgctctactccaagctcaccggcgagcgcgcgttcatgcggcgcaccatggccgccgcgctgctccggttcgtctacgacgcgtccccggcggaggccgagcgccactgcggcgtcggcgagctgctcgaggtctgcggcagcatcatcaacggcttcgccgtgccgctcaaggaggagcaccgggcgttcatggcgcgcgtgctgctgccgctgcaccggacgcggtgggtgcacacgtaccaccgccagctcgcctactgcgtgctccagttcgtccacaaggaccccggcctcgccggcgccgccgtcagggacatcctccgccactggccggcgaccaactgccagaaggaggtgctgctcatcgacgagctcgaggagatcgtcgagatcctcgaccagcaccacttcgacaagctcgtcgtccccgtctgctcccggatcgcccgctgcgtcagcagctgcagctcacaggtttgtgttcttgctccattttcaccatcgattttaactacattttcacatttcaattattactgcttgcttccaacatgcataattacctcttgcttccaacattttcttgtacattttacatgttaggatcaatcagcacaattttgtggaattcagtttcagaaatctaaactttgagcagttgaaattgaaaattaatctgaaaaatgggtttcagaatatacgctgttaagcaaaatttcagtgaacttttgagcagattcatctcagtgatccattctgccccccatgctgttagtgtggtacatgtggggaaaaaagttcggtgtgattgaaagtttcgataaaaagcggctttataaagcgtcgtcactttaatctgtccactccacgtacagcgttcgtgtaattcagtttcaaaaataaactccatttttacgcaatccaatccatcttcaaaatcccaacccattcaatttctgaatatccattatattctgagtactgaacactgatgatgctctgctctgcatctgaatatactagtagctgtagcaaactgatctaaagcttctgcatctgaatatacctgtaacaaactgatgatccaaagttttcggtaataaagagggatatgattccgattgcacttttcttgtcgtgtaatccagcctttgttgatatcatcagtactagtaatagtagcattagttgttgccatagtggttgctgtgtgtagtttacttcaaacttctaacttttatgtcgcattaaatgtttggatatatacatagagcattaaatgtggatgaaaaaaaaccaattgcacagtttatatgcaaattgcgagacgaatcttttgagactaattacgccatgatttggcattgtggtgctacagtaaatatttactaatgatggattaattaggcttaatagattcgtctcatagtttacaggcggaatttataatttattttgttattagtctacgtttaattctacaaatgtgtgtccgtatgtgtaaaaaaaaaatttcgccaaaacaactaaacacggcctaactcacactcactttagcaggttggaaaaataatcaaatcttggaccagcagttgcggtgttaatttcggtgtgctgcgtgtgattttgcaggtggcggagagggcgctgtacgtgtggaacaacgagcggttcgtggcgatggcgtgcgcggcggggccggcggcgatggaggagcggatcctgccggcgttcgtggcgagcatggaggctaacctggagcggcactggagcaggtgcgtgcagcaggtgacggccagcgtgcgtgcgctgcttgaccgggtggcgccgggggcctacgcccgctgcgccgccggcctcgccgcgcgcctggccgaggccgacgccgacgccgccgcgcgccgcgcacggtggcgccgcctggagctcgccgccgacgccggcgccgatgccaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0542700, RefSeq:Os09g0542700