Difference between revisions of "Os09g0544300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0544300| Description = Amino acid-binding ACT domain containing protein| Version = NM_001070365.1 GI:115480472 GeneID:4347749| Length = 709...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0544300|
 
GeneName = Os09g0544300|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0544300

Description

Amino acid-binding ACT domain containing protein

Version

NM_001070365.1 GI:115480472 GeneID:4347749

Length

7095 bp

Definition

Oryza sativa Japonica Group Os09g0544300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22319892..22326986

Sequence Coding Region

22319924..22320213,22320356..22320470,22321630..22321721,22321874..22321987,22322174..22322228
,22322383..22322493,22323261..22323314,22323397..22323572,22323658..22323765
,22324367..22324440,22324535..22324710,22325204..22325299,22325569..22325649
,22325748..22325801,22326281..22326415,22326488..22326568

Expression

GEO Profiles:Os09g0544300

Genome Context

<gbrowseImage1> name=NC_008402:22319892..22326986 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22319892..22326986 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggaggaggcggcggagagctgcggaagccacgcggcggcgtcggccgctggtcgtcgtggtggtggaggcggcggcggtggaggggccacgtcgtcgtcttcgtctgcgtcggccggggcggcggcggcggcggcggcgcggaagcagcagcagcagcagcgccacaagctggaggtgtacactgaggtgctccgccgactccacgacagcggcgtccccgaggcccggcgcgagggcttcgacgacgagctctggaaccacttcaaccgccttcccgcacgttacgccatggatgtgaacgtggagagggcggaggacgtgctgacgcataagcggctcttggagcaggcgaaggatccggcgcagcggccggctttcgccgtgcgggccgtgcaggtgtctccaattcttgatgggaatcagactgatgctgattcaaacactgcaggggaggaggttgcttcaaggctgttgaacagacaacagagcattcaccctcctcctgcctttggttcatctacaaatcttgaggcccttgctcttgaggctagcaagtcccaaggacaagaccatgatagcacctcagataatgtcaattacagacccatgcatgaaatcaccttctccaccattgacaaaccaaagcttcttagcgagctcacatcgctgcttggcgaacttggtctaaacattcaagaagcacatgcgttttcaacaaatgatggctactcactcgatgtctttgttgttgttggttggcatgatgaggaaactgaggatttaatagaatcagtacggaaagaaattggcaagattgatgagacgcagggatggtctacaactcattcatggtcttctccagttgaaaatatgcagattggggagaattcagcagctgaccatgttgaaatacctagggatggtgccagtgaatgggagattgatgtaaagctactcaagtttgggaataaagtagcatccggatcatatggtgatctttatcggggtacatattgcagccaagatgttgctatcaaagtgctcaaacctgagaggataaatgcggacatgcagcgtgaatttgcccaggaagtatatattatgaggaaggttcgccacaagaatgttgtacaatttattggtgcatgcactaaaccccccaatctatgtatagtcacagaatatatgtcaggtgggagtgtttatgattacctgcataaacataaaggtgtattcaagctccctgctttacttggagttgtgatggatgtttcaaaaggcatgagctacttgcaccaaaacaatattattcatcgagatttgaaaactgctaatctccttatggatgaaaatgggacagttaaggttgctgattttggtgttgcacgtgttaaagctcaatctggagtaatgactgctgaaacagggacatatcgttggatggctccagaggttatagaacacaagccctatgatcacaaggccgatgtttttagttttggaattttgatgtgggagctgctcacagggaagattccttatgagtacctgacaccattacaagcagctgtaggtgtggttcagaagggattacggcctacaataccaaaaaatgctcatgcaaaactttctgagcttcttcagaaatgttggcaacaggagcctgctgaaagaccagatttctctgaaatattagaaactcttcagagaatagcagaggaggttggtgatgagcatgatggaaagcacaaggagaaaatactgggcggactattttcagctttgagggggcgtgggcactaa</cdnaseq>

Protein Sequence

<aaseq>MAVEEAAESCGSHAAASAAGRRGGGGGGGGGATSSSSSASAGAA AAAAARKQQQQQRHKLEVYTEVLRRLHDSGVPEARREGFDDELWNHFNRLPARYAMDV NVERAEDVLTHKRLLEQAKDPAQRPAFAVRAVQVSPILDGNQTDADSNTAGEEVASRL LNRQQSIHPPPAFGSSTNLEALALEASKSQGQDHDSTSDNVNYRPMHEITFSTIDKPK LLSELTSLLGELGLNIQEAHAFSTNDGYSLDVFVVVGWHDEETEDLIESVRKEIGKID ETQGWSTTHSWSSPVENMQIGENSAADHVEIPRDGASEWEIDVKLLKFGNKVASGSYG DLYRGTYCSQDVAIKVLKPERINADMQREFAQEVYIMRKVRHKNVVQFIGACTKPPNL CIVTEYMSGGSVYDYLHKHKGVFKLPALLGVVMDVSKGMSYLHQNNIIHRDLKTANLL MDENGTVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGILMW ELLTGKIPYEYLTPLQAAVGVVQKGLRPTIPKNAHAKLSELLQKCWQQEPAERPDFSE ILETLQRIAEEVGDEHDGKHKEKILGGLFSALRGRGH</aaseq>

Gene Sequence

<dnaseqindica>33..322#465..579#1739..1830#1983..2096#2283..2337#2492..2602#3370..3423#3506..3681#3767..3874#4476..4549#4644..4819#5313..5408#5678..5758#5857..5910#6390..6524#6597..6677#ctgcgagatcgaagacctagagggcggcgctaatggcggtggaggaggcggcggagagctgcggaagccacgcggcggcgtcggccgctggtcgtcgtggtggtggaggcggcggcggtggaggggccacgtcgtcgtcttcgtctgcgtcggccggggcggcggcggcggcggcggcgcggaagcagcagcagcagcagcgccacaagctggaggtgtacactgaggtgctccgccgactccacgacagcggcgtccccgaggcccggcgcgagggcttcgacgacgagctctggaaccacttcaaccgccttcccgcacggtgcgtgcgcgagcgaccccccctgctgcggcggcgcgaatcgagcgcggcagtgttggtgttgttgttgatgatgatgctgcggttgctgctgcggcggcctgaactgatttggggggttggtttttggttggtgttgcagttacgccatggatgtgaacgtggagagggcggaggacgtgctgacgcataagcggctcttggagcaggcgaaggatccggcgcagcggccggctttcgccgtgcgggccgtgcaggtggggtgttcctacgacttcgtcaccatctcatagttttttgggaggcaattctcaactccaccgatgcaattactgtaggcaatccagaacgcgaatttcgcagtatcatatagtttgacttaaggtcacgaaattatatggtttgactgcttgctgataattgcttggttgggggccagttttcccattggacatttcctctttttcaaattgttttcactctctgattaagtcatcagcacgaaggttgcactgcgtgagtcaattgggattttatctggttgtaatttggtttttaagtcagaaagttgaaaagtttcttctgattagcttttaagctgcagttagtttccatcaaatattggatcatagacatgcagtaccttttgatatcggatatgcagttgatccaacaatacatcgttttttttattacctggttccatttgtttttataaaaacgaaatcctttcattatgttcagattcattaataccactggcaaatatcagtgttccaggccaaaatgcatctaaagcaccaattcttacaaaccaaccagacttttgcaacatgtgaccaaatgaacactccactctggaagatcactgaaggcagtgcaagtgttttcattgtctcactttgtttcagttcttttccttaccaacataggaaaatcaccttatggttttgcctcgacatgctgtgtagcgtgtacttgacaaatttcatgtttgagttctggatgttccaaactttcaatagaaaatattgtatgtaggctcagtgtttcgttgactaaagaaaagtttcaacattatatgaaccctgccctttttctaattttaatttatagtcagatatctctattcttgtgggtggtgatgtgcattttggtgttaaagtaatatgaacatttacatctacactttctgtggctagtcccgtgaacattgattgacttgttcaaggctagcatctatgctttcattagttgacagtgtcaatgctgttcttttgttttctaagtgatgacgtgttactttttatatattagatattcgttttcttaggactcttaaactaatattagcaatctgtagaggcctactattttttttaccattatccttattggaagaccttgattcattaggtgtctccaattcttgatgggaatcagactgatgctgattcaaacactgcaggggaggaggttgcttcaaggctgttgaacagacaacagaggtacctgtgccttttcatcgtttgcttaatatttctttggttttgcatatgactaatattgtactttaacatgttttaatatctaagtttcatattcaccattcaccctcctcctgcctttaacatgttttaatatgtaattttatattcagcattcaccctcctcctgcctttggttcatctacaaatcttgaggcccttgctcttgaggctagcaagtcccaaggacaagaccatgatagcacctcagataatgtcaattacaggttagtcgctgctgctggtacctttgtgactctatttaatcttagtaataccacatattcaagttaaataattatattttgggagtaaacattggtattgggaatcttaattgttgcatttctcttatggaagtgcttatttccctgcagcatacaataatttccttgtattttgtggccttacagacccatgcatgaaatcaccttctccaccattgacaaaccaaagcttcttagcgaggtaaacctatgcatgcttgaagattccatcaggaacagtttatatgttcaagatctttattgatacatttcatggtctatatcttgattaaatgttaatagctaaaattcaatttgtactttttaactgataccatgttctctgatacatccagctcacatcgctgcttggcgaacttggtctaaacattcaagaagcacatgcgttttcaacaaatgatggctactcactcgatgtctttgttgttgttggttggcatgatgaggtatttgaacattttactggaactatgctggctacgcatttgatgatgatgtccttgcatcgctgtgcacttgttacctgcagcagtagaaaaaagaaccacacttttctatgattttaattggtggacattttccatcaccagatttttacatgtcatacaaatgacgtgggcatttgactatcagagaatatggaaaccataacatgcttcatataatttttctttcttctctgtacaaatctatctgatatctaactaggcatgtggaactacattagtttgcacaattgagtagcatatgtacttgaacggaaacatgtaatcagaatgcactttatggtctgatattgatgaagatgcgttttgtgctttcatgagagcctggtgaggtctagcatgtttgatgtgatgataattattccctccgttctataatattccaaaatcccttatattatggatggagcgagtacatgataatttatagcgtagcattttaaggttatcagtccaatggttggtgagttaaacttttctgatggaattagtgtgtgcattttgcacatatgctcaacattctgtaactaatactgtggatcatgctgctatattcaaggaggtgatgttggtattccctaacttcccaacagttttgtaatcaaacaatttgtcaaaagatgagccagcaaatacctctgatttccataattgttctaaatattttctctactgtttaacgtttgcttatctgtttatttttataggaaactgaggatttaatagaatcagtacggaaagaaattggcaagattgatgaggtgaaccactgagtttctacttaattgtggttccgctcttagttatcacatgcttattttctgcttggtgttgaattgacagacgcagggatggtctacaactcattcatggtcttctccagttgaaaatatgcagattggggagaattcagcagctgaccatgttgaaatacctagggatggtgccagtgaatgggagattgatgtaaagctactcaagtttgggaataaagtagcatccggatcatatggtgatctgtgagtgcttgttgattactatcattaaagaaaaagtccaatttatgctttgatgagtcacttaaccaatctgtttttcttccagttatcggggtacatattgcagccaagatgttgctatcaaagtgctcaaacctgagaggataaatgcggacatgcagcgtgaatttgcccaggaagtatatattatgaggtatgctacaagatctgctctgtttgtcatttatttgttctgtaatatatttattttatcccattaagtgttgtttcttcttttctaccatgaatgatatcgtataaaaaaaagccatggttgcgctgaatgacttcatagctgaaatgcattcgttcaatcgctatttgctgccagtgtcttattatatcaatcttttgtttgcttatggattgttcatattattactccctccatccacaaaagttacacctatttcacatttgagtttttccaactaagttgttcctatttgtagtctttatgcattcaagacttaaatgaagagataaattaaatattttattagaacccaaggagtcatctaaatactcattggttgcatgcttgcattcactccttgattttgtaacatccaaagtgatttaatttctctttggtcttggtgtcaaaagtaatatgtgtaacttttgtgaatggagggagtattacctataactatttgtaactgcatcacccttatgaagctgtcttccattagttctgctatgttcttatctgttcagattttaagtttatggggatatattttggattttaggaaggttcgccacaagaatgttgtacaatttattggtgcatgcactaaaccccccaatctatgtatagtcacaggtatgaaaccggaaaactctagcactgcgagtttttgtttgtttattttgagtgttgtaataacaaaataacctggtattcttctcttctccagaatatatgtcaggtgggagtgtttatgattacctgcataaacataaaggtgtattcaagctccctgctttacttggagttgtgatggatgtttcaaaaggcatgagctacttgcaccaaaacaatattattcatcgagatttgaaaactgctaatctccttatggatgaaaatggggtaagtaatgtagggaaattactccataatacaaatgcttcgtgtcccttattttatttttactttagtgaatttgttgcctatcaaattcacttcaactggtacttctccagctacctcgtttgaaaatcttgcgtcaagcattggtatccgacttcttgttcttccttaaaaaaaaggaaaatgatggaacaatgttttcaagcaatattcacatgaaaattgaagagaaaagtagccacggtaaagtagtcacctgtaattcagatttcagattctgttaactggaatttggttttaactacccgaactttgccatcactgttaaaaatcaactcacggtttacaggggaatcatatccttgtggtaacttggaagtcctttatgatgaattgtagcgttaatacaaacttttttttggctttgaatgtgtgatttatataacaaaatcggataggtttatctgaaacactggtttttttcatcctgcagacagttaaggttgctgattttggtgttgcacgtgttaaagctcaatctggagtaatgactgctgaaacagggacatatcgttggatggctccagaggtgatttacccattgacatagttttagtactaactgtcctagcattatactctacaaactactgtttattatattgtttaggtggaacttggttattaatgttatgccccaaaatatttgttttctgttttctttagtgctgtaaaatttaaaatataccttccaaattggatcataagtttgcaattgctgtaaaccagcttcagtttactattctgttgtcagatcgtatatcacattatcatcgcacaaaattttacctgttgtaggttatagaacacaagccctatgatcacaaggccgatgtttttagttttggaattttgatgtgggagctgctcacagggaaggtacttttgtttgtcacttgctaatccattcattcgtaactctgaatcaattgttttgagacttgtttataattggtataacaacctattgtgtgcagattccttatgagtacctgacaccattacaagcagctgtaggtgtggttcagaaggtgaacattgtttttctttctacatgctgtcgtcttcttttattttgtttagaactggaacttatccttccaaccaaataattgcatgagactgataatgggtacacaaatataagggattttgccatgcacatatattttggcctaatgcacatggataacatggattggtttgagttatttttagtccaagaaatcatgtagtagatgtttgagatataaataatttaacaaacacagcttcagaaaattatggaaaatgcactagtgaaaattgcaaaatatcattggggctctctttcttcagggtttttgtttacctctttgacagataaaagacattctaatatagtgaaatactaatatgaatatgctcttggttatgaaaccctttgtgaaagttcttaactaagaatattaattatatatccgtctacagcacggaaacccacttctaatatggtaaccctcatttgcagggattacggcctacaataccaaaaaatgctcatgcaaaactttctgagcttcttcagaaatgttggcaacaggagcctgctgaaagaccagatttctctgaaatattagaaactcttcagagaatagcagaggaggtttgtgattgaacttaatgcatactaacttaaatggttgaaggtttatgttcttgtgaaccaatgttgcaggttggtgatgagcatgatggaaagcacaaggagaaaatactgggcggactattttcagctttgagggggcgtgggcactaaatggtgtgggaatacatgttttcattccatatggaagggcctgagaaaaagatcagcgtcagttccttggcaggtgcagcgccacattgagattagactgctgcagtcgacttaatgagcaattttcagatgcaagtccatcaaggtgttaactgttgtcatactatttttttggtgtacaacttccgggttccattacagctgtaacataggaagagttgttgtgaagtgtacattattgacctgattcttctactgacgagttgtaacttgtagttgaataagaagccagatttagggcgtgcattattctcccagatcctgtggtttagctatgcttatctatctactacctactgcttactttttgtcctgaattctttttcgacaatataatgttctgtgccgtcctgtttct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0544300, RefSeq:Os09g0544300