Difference between revisions of "Os09g0555100"

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(Created page with "{{JaponicaGene| GeneName = Os09g0555100| Description = Auxin Efflux Carrier family protein| Version = NM_001070423.2 GI:297609931 GeneID:4347809| Length = 2057 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0555100|
 
GeneName = Os09g0555100|

Revision as of 21:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0555100

Description

Auxin Efflux Carrier family protein

Version

NM_001070423.2 GI:297609931 GeneID:4347809

Length

2057 bp

Definition

Oryza sativa Japonica Group Os09g0555100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22839153..22841209

Sequence Coding Region

22839153..22839287,22839362..22839441,22839777..22839901,22839995..22840119,22840197..22840415
,22840493..22840615,22840696..22840796,22840882..22840934,22841007..22841209

Expression

GEO Profiles:Os09g0555100

Genome Context

<gbrowseImage1> name=NC_008402:22839153..22841209 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22839153..22841209 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtttcttggcattgcttctggtggcttcaatgccagtcgtccaggtgctactcataggtgttgttggagcttttctcgcttctggttacagcaacattctaacttcaagtgctctaagcgatatgaacaaggttgttttcaccgtcttcacaccatctctcatgtttgctagcctggcgaggacggtcacgttttctgacgtcatttcttggtggtttatgccaattaacatagggatcacattcatggctggtggcactctaggctggatagcatgtagaatcttgaaaccaccacaacatttcagaggaatgatcattgccttctgctcagcaggaaatcttggcaacttgctcctgattgttgtcccagcagtctgtgacgaagatggcaacccgttcggaaaagacagcagccgctgccgatctcttgggctctcctattcatcattgtccatggctcttggtggcttgtacatatggacgcatacgtacagtcttatgaagaagaagagagatcaaatgtatcaccagcctaacagcactcagtgccttgacgacagcgatgaagaacatcattctaagaaattcaaagcaaatggtgaagctgcttacgccgatgaggaggcaactcttccggtgtcagctaaactggctcaacacaacgaagagaaccaaatggaagctccattgctgtcttgcgagagcaaggttgctaagaaatgctcgtggacaacaacaaacctgaaggacaccatccaccacgttgtcgaggagctgatggcaccaccaactctatctgctatacttggatttgtttttgggctagttccatggttgaaatctcttgtcatcggtgatggcgcccctctcagagtcatccaggactccatccaactgatgggaaatggcacgattccttgcgtcaccctcatccttggtggaaatctgataaaagggctaaggaagtcggagctcaagcgtacggtgatcatcgcgatcgtctgcatccgctacgtgatccttcctctagtggggattgcagtagttcatggtgcatactgggtcggattcttgccacacgacccgctgtaccgctacgtgctgatgatgcagttcgcgctgccacctgcaatgactattggtaatctttccctataa</cdnaseq>

Protein Sequence

<aaseq>MGFLALLLVASMPVVQVLLIGVVGAFLASGYSNILTSSALSDMN KVVFTVFTPSLMFASLARTVTFSDVISWWFMPINIGITFMAGGTLGWIACRILKPPQH FRGMIIAFCSAGNLGNLLLIVVPAVCDEDGNPFGKDSSRCRSLGLSYSSLSMALGGLY IWTHTYSLMKKKRDQMYHQPNSTQCLDDSDEEHHSKKFKANGEAAYADEEATLPVSAK LAQHNEENQMEAPLLSCESKVAKKCSWTTTNLKDTIHHVVEELMAPPTLSAILGFVFG LVPWLKSLVIGDGAPLRVIQDSIQLMGNGTIPCVTLILGGNLIKGLRKSELKRTVIIA IVCIRYVILPLVGIAVVHGAYWVGFLPHDPLYRYVLMMQFALPPAMTIGNLSL</aaseq>

Gene Sequence

<dnaseqindica>1..135#210..289#625..749#843..967#1045..1263#1341..1463#1544..1644#1730..1782#1855..2057#atgggtttcttggcattgcttctggtggcttcaatgccagtcgtccaggtgctactcataggtgttgttggagcttttctcgcttctggttacagcaacattctaacttcaagtgctctaagcgatatgaacaaggtgagcacatagccattcactgcgaaaaaattgtattaattgtctctggctgatcttgttgagatttctgacaggttgttttcaccgtcttcacaccatctctcatgtttgctagcctggcgaggacggtcacgttttctgacgtcatttcttggtgagtttcagtttatagatatgcaacaatgcaagtgcagttactacaaaatctgcccaaattccatctccacattctaataactgccaaaatcaacacaatatgtatagctcagccagactttctgaattttttgaaccgtaagctctttctgaaatttataaggattcttgcagaagtgagaaactctctttctgaaatagaaaacaagctttacatatatagttttctcattcagagcactgtttaaatatctgggcagagcatatatacaatatccaaattttgtttgctgggtaactccacagcactaacaaaagaattctatcatgtaggtggtttatgccaattaacatagggatcacattcatggctggtggcactctaggctggatagcatgtagaatcttgaaaccaccacaacatttcagaggaatgatcattgccttctgctcagcaggttagtttcctaggtggattgcatgtttttaccctcatatttttgctgaataatcctaatgttagcagtgtcatcaactgacaaaaaatgcaggaaatcttggcaacttgctcctgattgttgtcccagcagtctgtgacgaagatggcaacccgttcggaaaagacagcagccgctgccgatctcttgggctctcctattcatcattgtccatggctgtaaggaacaaaaatatatcattcactgaatgatcagctgaacaaaagaactgacacacactgtatctgcactgcagcttggtggcttgtacatatggacgcatacgtacagtcttatgaagaagaagagagatcaaatgtatcaccagcctaacagcactcagtgccttgacgacagcgatgaagaacatcattctaagaaattcaaagcaaatggtgaagctgcttacgccgatgaggaggcaactcttccggtgtcagctaaactggctcaacacaacgaagagaaccaaatggtaagttgagtggtttgttcctcggaaaaattaatcttcagagaaaacttagtactattaacttgtctgaaattcaggaagctccattgctgtcttgcgagagcaaggttgctaagaaatgctcgtggacaacaacaaacctgaaggacaccatccaccacgttgtcgaggagctgatggcaccaccaactctatctgctgtgtgttcctgacaaaaccagccacaatatttcatctcatcaacccagtcttggactaaatttggttattcttgcttcagatacttggatttgtttttgggctagttccatggttgaaatctcttgtcatcggtgatggcgcccctctcagagtcatccaggactccatccaactgatggggtaagttagtatttacagtgttcttcttcatagagtatatttctgtctatttttcagtgttgcccttcttttgcttgtcttgcagaaatggcacgattccttgcgtcaccctcatccttggtggaaatctgataaaaggtaggatgtcaattactcatgattcatgaagctgtgtgttttctgaacctttatctgaatgtgtttatgcagggctaaggaagtcggagctcaagcgtacggtgatcatcgcgatcgtctgcatccgctacgtgatccttcctctagtggggattgcagtagttcatggtgcatactgggtcggattcttgccacacgacccgctgtaccgctacgtgctgatgatgcagttcgcgctgccacctgcaatgactattggtaatctttccctataa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0555100, RefSeq:Os09g0555100