Difference between revisions of "Os09g0567700"

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(Created page with "{{JaponicaGene| GeneName = Os09g0567700| Description = WD40-like domain containing protein| Version = NM_001070499.1 GI:115480740 GeneID:4347889| Length = 4957 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0567700|
 
GeneName = Os09g0567700|

Revision as of 21:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0567700

Description

WD40-like domain containing protein

Version

NM_001070499.1 GI:115480740 GeneID:4347889

Length

4957 bp

Definition

Oryza sativa Japonica Group Os09g0567700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23498028..23502984

Sequence Coding Region

23498343..23498450,23498778..23499053,23499201..23499452,23499577..23499974,23500063..23501056
,23501234..23501444,23501550..23501784,23501909..23502031,23502225..23502345
,23502451..23502660

Expression

GEO Profiles:Os09g0567700

Genome Context

<gbrowseImage1> name=NC_008402:23498028..23502984 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23498028..23502984 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattacggagaagccgagctggattcgccacgagggcctgcagatcttctctatcgacatccagccgggcggcatccgcttcgccaccggcggcggcgaccagaagattcgcatatggagcatgaaatcagtggccaaagacaatgacagtgatgattccagccaaaggttgctggctacaattcgagaccattttggaacagtaaactgtgtgagatgggcccatcatggccgctatcttgcttcaggatcggacgatcaagttatccaaattcatgaaagaaaagctggcactggaacatctgaatttggaagtggagaacctccagatgtagaaaactggaaggttgttatgaccttaagagggcatactgccgatgtggttgaccttaattggtcccctgatgactcgacattggctagcggcagtttggataatactgttcacatatggagcatggccaatggcatatgcactgctgtcttgcgagggcattccagtttagttaaaggcgttacatgggatcctatcggttctttcatcgcaagccaatcagatgacaagactgttatcatatggcgtacgagtgactggagtcttgctcacaggacagaaggccattggtcaaaatcgcttggttcgacattttttaggcgacttgcttggtctccctgtggccacttcataaccacaactcatggttttcagaaacctaggcactcagcccctgtgcttgaacggggtgaatggtcagcaacctttgattttctggggcataacgcacctgttgtagtggttaagtttaaccactcaatgttccgtaagcatttatcttctggccaagacgcaaaggctgcaccagctggatgggccaatggagcatcaaaagcatcatctaaagaacatcaaccatataatgttattgctattgggagtcaggaccgaactattactgtctggacgacagcgagtgcccggccattgtttgttgccaagcatttcttcactcaaagtgtggttgatttatcttggagtcctgatggctattcactttttgcctgctctttggatggttcagttgctacctttcactttgaagcaaaggagcttggatacaggttaagggatgctgaactggatgaattgaagaagaatagatatggcgatgttagagggaggcaatcaaatatagctgaaagccctgctcagttactgctagaagaagcatcggccaaacaatctgcaagcaaaaaggtttccagtgtccagcaatttcaatcaccccccaaagtttctacagatgcacctaacccgtctacaagcgttccaaatcagaaagctcctgaagctttacctgaagatgagaagaaaactgcaggttccactgctgatgacataaataaagcacctcgtttatctagtccagtgaaacaaagagaataccggcgtcctgatggccggaaaaggattattccagaggcagttggatttccttccaaccaggacatgtccaaccgttctcagaatcaaggtgtggatttttcatccctggatcagcgaatgatccttggagagaatggaacaagaccatcttatagtgctagcggtaactgtaataattgtggagttagggaacgctctggcattactgcaagaactaacattagtgagagtcttgtaatccaaaaagcttcagctggtgctggcagtgatggaaggttgagcatagaacagtctggatctgtagttccaggctcattggcctcttgctcttcactttctatccatgtattcaataagaaagacaatgaggattctttaccggtccgccttgaagcaaagcctgtagaacgttctgcaggagacatgattgggcttggtggtgctttttcaacaaaagaaactgagattacatgtacaagaggaacagaaactctttggtcagatcgcatctctgccaaggtgactgtcttggctggtaatgcgaatttctgggcagttggctgtgaagatggttgcctgcaggtttacacaaaatgtggaaggcgagcaatgccagcgatgatgatgggatcagcagctgtttttatagactgtgatgagtgttggaaattgcttcttgtaacaaggaggggtttgatgtacatatgggacctctataccaggacttgcgttttgcatgattctttggcttctttggtaacatctccagatgaggcagctggaaaagataccggtacagtaaaggttatatctgctaaattttcaagatgtggctcgcccttagttgtgcttgccagtcgccatgcttttctttatgacaccagcctgaaatgctggctaaggatagctgatgattgctttccagcatcaaattttgctagctcatttagttctactcaaggtggagagctaggcaagttgcagatcgatataggaaaattcatggctagaaagcctatttggagcagggttaccgatgatggggtgcagacacgctcccatttagagacccagctggcagcttcattggctttgaagtctccacaggaatatcgccaatgcctcttatcctacataagatttctggcaagagaggcagatgaatctcgtctacgtgaagtttgtgagagctttcttggtcctccgatgggcatggttgacgctgcatcatctgctgatttgaaaaatccatcatgggatcctgatgttcttggaatgaagaaacacaaactcctaagggaagatatactaccttccatggctacgaaccgcaaggtccaacggctgttaaacgaattcatggacctcctttcggagtacgaggctgctgagacaaacgtcgagcaaatggacgtgacaccaacaccaccaccaccaccaccagcagcagcaacagaaggcaacaataatggtgcctcatag</cdnaseq>

Protein Sequence

<aaseq>MITEKPSWIRHEGLQIFSIDIQPGGIRFATGGGDQKIRIWSMKS VAKDNDSDDSSQRLLATIRDHFGTVNCVRWAHHGRYLASGSDDQVIQIHERKAGTGTS EFGSGEPPDVENWKVVMTLRGHTADVVDLNWSPDDSTLASGSLDNTVHIWSMANGICT AVLRGHSSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTFF RRLAWSPCGHFITTTHGFQKPRHSAPVLERGEWSATFDFLGHNAPVVVVKFNHSMFRK HLSSGQDAKAAPAGWANGASKASSKEHQPYNVIAIGSQDRTITVWTTASARPLFVAKH FFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEAKELGYRLRDAELDELKKNRYGDVR GRQSNIAESPAQLLLEEASAKQSASKKVSSVQQFQSPPKVSTDAPNPSTSVPNQKAPE ALPEDEKKTAGSTADDINKAPRLSSPVKQREYRRPDGRKRIIPEAVGFPSNQDMSNRS QNQGVDFSSLDQRMILGENGTRPSYSASGNCNNCGVRERSGITARTNISESLVIQKAS AGAGSDGRLSIEQSGSVVPGSLASCSSLSIHVFNKKDNEDSLPVRLEAKPVERSAGDM IGLGGAFSTKETEITCTRGTETLWSDRISAKVTVLAGNANFWAVGCEDGCLQVYTKCG RRAMPAMMMGSAAVFIDCDECWKLLLVTRRGLMYIWDLYTRTCVLHDSLASLVTSPDE AAGKDTGTVKVISAKFSRCGSPLVVLASRHAFLYDTSLKCWLRIADDCFPASNFASSF SSTQGGELGKLQIDIGKFMARKPIWSRVTDDGVQTRSHLETQLAASLALKSPQEYRQC LLSYIRFLAREADESRLREVCESFLGPPMGMVDAASSADLKNPSWDPDVLGMKKHKLL REDILPSMATNRKVQRLLNEFMDLLSEYEAAETNVEQMDVTPTPPPPPPAAATEGNNN GAS</aaseq>

Gene Sequence

<dnaseqindica>316..423#751..1026#1174..1425#1550..1947#2036..3029#3207..3417#3523..3757#3882..4004#4198..4318#4424..4633#gagttcgagttcgattcgattcgattcgatttcgttttctctcaggaaggaacacgagcggttgggttcatccccctcctcgccgtgttcttcgctccgccgccgggcgccgccggatcggtcgccccaccccccccccgccccctccctcccgaagcttctcgaaccttcctcccccctaccaggagccgtcccgaggcggcctagggttcccgcgggcggccgcgcgatttctagggttttgggtcctttgctcggggcatgggccctgcggttcggcggcagtgacgagcggcaagccacctagaggaggagatgattacggagaagccgagctggattcgccacgagggcctgcagatcttctctatcgacatccagccgggcggcatccgcttcgccaccggcggcggcgaccagaaggtgacttaagattttttttttttataactctcgtcaagtgtaaaattttgctggtttactgtcaagctatttttccccgtgataaattgaccttctcagagttgacctgtacaaggtagggaatttaggcagcaccgttacatttcgatgtatcaaggatagttcactatattcataattatgttagagggaattctttgcatcagtgctttagtggttttagtgtctgggctcgtcagtgtggaagctggtaatttgttatcaagccatcattgaggaacccgcagcctgctctttgctaatatcccatttttgttctcacaatagattcgcatatggagcatgaaatcagtggccaaagacaatgacagtgatgattccagccaaaggttgctggctacaattcgagaccattttggaacagtaaactgtgtgagatgggcccatcatggccgctatcttgcttcaggatcggacgatcaagttatccaaattcatgaaagaaaagctggcactggaacatctgaatttggaagtggagaacctccagatgtagaaaactggaaggttgttatgaccttaagagggcatactgccgatgtggtaattatctgccaaaatctcagtcatgtcatgcttaacataattagattttaatctgtcacctgttacttagatctcttactaaaactgtcatgatccttatcgattcattgttgaacacagttatatttcttatgtgtaaagtaggttgaccttaattggtcccctgatgactcgacattggctagcggcagtttggataatactgttcacatatggagcatggccaatggcatatgcactgctgtcttgcgagggcattccagtttagttaaaggcgttacatgggatcctatcggttctttcatcgcaagccaatcagatgacaagactgttatcatatggcgtacgagtgactggagtcttgctcacaggacagaaggccattggtcaaaatcggtatgtttttgttatattgttgtgtatttggacttggtcattacatttctgtggttcacatatcttgtttgcagaaagcctccttactgaaaaatattttctatgtgtgtgtgtgtgtttgcagcttggttcgacattttttaggcgacttgcttggtctccctgtggccacttcataaccacaactcatggttttcagaaacctaggcactcagcccctgtgcttgaacggggtgaatggtcagcaacctttgattttctggggcataacgcacctgttgtagtggttaagtttaaccactcaatgttccgtaagcatttatcttctggccaagacgcaaaggctgcaccagctggatgggccaatggagcatcaaaagcatcatctaaagaacatcaaccatataatgttattgctattgggagtcaggaccgaactattactgtctggacgacagcgagtgcccggccattgtttgttgccaagcatttcttcactcaaagtgtggttgatttatcttggtatgtgaatttgaccatataacatattctataattagtatcccgtgtatgtgcaagctcaatagcaactgctctttttccctgacaggagtcctgatggctattcactttttgcctgctctttggatggttcagttgctacctttcactttgaagcaaaggagcttggatacaggttaagggatgctgaactggatgaattgaagaagaatagatatggcgatgttagagggaggcaatcaaatatagctgaaagccctgctcagttactgctagaagaagcatcggccaaacaatctgcaagcaaaaaggtttccagtgtccagcaatttcaatcaccccccaaagtttctacagatgcacctaacccgtctacaagcgttccaaatcagaaagctcctgaagctttacctgaagatgagaagaaaactgcaggttccactgctgatgacataaataaagcacctcgtttatctagtccagtgaaacaaagagaataccggcgtcctgatggccggaaaaggattattccagaggcagttggatttccttccaaccaggacatgtccaaccgttctcagaatcaaggtgtggatttttcatccctggatcagcgaatgatccttggagagaatggaacaagaccatcttatagtgctagcggtaactgtaataattgtggagttagggaacgctctggcattactgcaagaactaacattagtgagagtcttgtaatccaaaaagcttcagctggtgctggcagtgatggaaggttgagcatagaacagtctggatctgtagttccaggctcattggcctcttgctcttcactttctatccatgtattcaataagaaagacaatgaggattctttaccggtccgccttgaagcaaagcctgtagaacgttctgcaggagacatgattgggcttggtggtgctttttcaacaaaagaaactgagattacatgtacaagaggaacagaaactctttggtcagatcgcatctctgccaaggtgactgtcttggctggtaatgcgaatttctgggcagttggctgtgaagatggttgcctgcaggtatctaatatccctttagtggaattccttgtagatttatttcatgttttagtttggaatagttacaaaatctatcaataattgctggaatatgattttatttattccttcatgtgcattcatttttctgacaatctggtagcctaaacactcgaatcaactggtctaattgttcaggtttacacaaaatgtggaaggcgagcaatgccagcgatgatgatgggatcagcagctgtttttatagactgtgatgagtgttggaaattgcttcttgtaacaaggaggggtttgatgtacatatgggacctctataccaggacttgcgttttgcatgattctttggcttctttggtaacatctccagatgaggcagctggaaaagataccggtaaatatttcatatgtagtgttaatctgaacttttgtgcatctaaattgatgttgaccaaaatggcttgttcttgcaagttgatcttgctttgttatatgacaggtacagtaaaggttatatctgctaaattttcaagatgtggctcgcccttagttgtgcttgccagtcgccatgcttttctttatgacaccagcctgaaatgctggctaaggatagctgatgattgctttccagcatcaaattttgctagctcatttagttctactcaaggtggagagctaggcaagttgcagatcgatataggaaaattcatggctagaaagcctatttggagcaggtttgcacacttccattgttgctcttgtcttatgagcgtttgaaactagaatcatgacatgctagtgtactaacatagcagaatttgctctaaatgtatacttgtttgactgttggcactacagggttaccgatgatggggtgcagacacgctcccatttagagacccagctggcagcttcattggctttgaagtctccacaggaatatcgccaatgcctcttatcctacataagatttctggcaaggttagtttgtttatcaattcaatacaatggctacagagtctccttttctgaggcttagcaacatttcttttttgcaacctcagctctatatgtttaattggctgagaaagtttgtgattcttttatatctgatgagaacagtctatgatgctgtgcggaaatgattatattgcttgttctttgtttcgttcagagaggcagatgaatctcgtctacgtgaagtttgtgagagctttcttggtcctccgatgggcatggttgacgctgcatcatctgctgatttgaaaaatccatcatgggatcctgatgttcttgtaaggctctctgtctgatagatggcctgataattctatgttttcttggacgtgatgtttatttaccactttgagcctgtgaactcaagtatggtaaatctgcagggaatgaagaaacacaaactcctaagggaagatatactaccttccatggctacgaaccgcaaggtccaacggctgttaaacgaattcatggacctcctttcggagtacgaggctgctgagacaaacgtcgagcaaatggacgtgacaccaacaccaccaccaccaccaccagcagcagcaacagaaggcaacaataatggtgcctcatagcagttgggattgctggagaattattactgacacccccttgggtaagcataggacaatcaagtgcatacaacatagaactatcatgtgttttgagaattgcccatggttgattaaatttatgtagctgctagagcctttgtgttcatcttcttcttaatagcaaagggtgagacctcagccaaacaacccgttagttgtaacgcgagcagagtgtaacagtagaaagaaagcgagcgagggaggcctcctggtgatcgattgtgtaacagtaaatctgtagaaggtcagacgattaacttaatgtcctttttgcttatgggttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0567700, RefSeq:Os09g0567700