Difference between revisions of "Os09g0573100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os09g0573100| Description = Ubiquitin domain containing protein| Version = NM_001070539.1 GI:115480820 GeneID:4347931| Length = 3154 bp| Defini...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os09g0573100|
 
GeneName = Os09g0573100|

Revision as of 21:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0573100

Description

Ubiquitin domain containing protein

Version

NM_001070539.1 GI:115480820 GeneID:4347931

Length

3154 bp

Definition

Oryza sativa Japonica Group Os09g0573100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23757217..23760370

Sequence Coding Region

23757591..23757684,23758270..23758334,23759383..23759492,23759576..23759654,23759744..23759835
,23760020..23760143,23760220..23760324

Expression

GEO Profiles:Os09g0573100

Genome Context

<gbrowseImage1> name=NC_008402:23757217..23760370 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23757217..23760370 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggctgccgccggcgacgaggcggagatggtcgaggtgacgctgcgcgccgtcggcccgtcccgtcccaccacccttcgcctccctccgtttatctcggttgccgatctgcgccgccacatcgctcacgaccgacatctcccacaagaccgcctccgcctggtcctgcgaggaaggaatctcccgtgccaagacgacgcccatgtcaacctccgccacggggatagtcttatagtggccgtggcacctaagccacctgctaatcatctccgtgacggtgatggtgacgatgacgatgatgaagaggaagagctgaagttcaaaataccagaaacaaccacctggtggaagagaaaattttttatatttcttcgagacaaattgagattacctgatatcttgttgatggtgctattttctctgggtatcaaagcatgggttcttatcgctatgtggttcctttttgcacctattgctcaaatgtacgacgttggacctttatttatacttggtacaggcttcttggtcattctttgtaatcttggaagacgacagcaaggtgatgtcagtgcatactccatatttaatgaagacttccgggagctaccaggaacgcttaacgcggagcgcatcgatagagacattcgggcaggccaattttga</cdnaseq>

Protein Sequence

<aaseq>MAMAAAGDEAEMVEVTLRAVGPSRPTTLRLPPFISVADLRRHIA HDRHLPQDRLRLVLRGRNLPCQDDAHVNLRHGDSLIVAVAPKPPANHLRDGDGDDDDD EEEELKFKIPETTTWWKRKFFIFLRDKLRLPDILLMVLFSLGIKAWVLIAMWFLFAPI AQMYDVGPLFILGTGFLVILCNLGRRQQGDVSAYSIFNEDFRELPGTLNAERIDRDIR AGQF</aaseq>

Gene Sequence

<dnaseqindica>2687..2780#2037..2101#879..988#717..795#536..627#228..351#47..151#ggaagggagaggggagtagacagacggggacagatcagagtcaggcatggccatggctgccgccggcgacgaggcggagatggtcgaggtgacgctgcgcgccgtcggcccgtcccgtcccaccacccttcgcctccctccgtttatctcggtaacaaaccacccgacccacccctaattcagaaatccttcctccttactgctccccggcccctccccgcccctaggttgccgatctgcgccgccacatcgctcacgaccgacatctcccacaagaccgcctccgcctggtcctgcgaggaaggaatctcccgtgccaagacgacgcccatgtcaacctccgccacgggggtatagtatactagtattctttttctttctcttcacatacatcttatgtggaagacaggactattctaggatggatggttaattcgttgtctcttcaagaccctactttttttcttcttcttctgcacttgatacatcttgtggaatacagttaaatacttccttccttctgcaatttctttagatagtcttatagtggccgtggcacctaagccacctgctaatcatctccgtgacggtgatggtgacgatgacgatgatgaagaggaagagctggtatatttctatcatagtatgtcatatagcttttatattttgaggatgtttatgttttcctcataagaattatctctcccatcctgtagaagttcaaaataccagaaacaaccacctggtggaagagaaaattttttatatttcttcgagacaaattgagattacctggtaatttagctttagattatgcacctctattttctgattacatgatagcgttgattaatgtggtgtgcattttgcttctccagatatcttgttgatggtgctattttctctgggtatcaaagcatgggttcttatcgctatgtggttcctttttgcacctattgctcaaatgtacgacgttggacctttatttgtaagtaactttgggaatacaacttctccagcaatgtccatatgaacccactgttctcttgtctccactactcatttttctcatagagatatgtgtgaaaaaaatggtgtggtttaaagaagtatcaaattaataatgtccgatcagcataactactgtctcatcatgttctctcttactctacctaaacgagtccttgacattttgaattcgaatgtaccacacgctgatactcatctagtaacttataccacaacactcatctacttgggtttttctatgacatattctgagactcgtgtatttagaaggaataacagactgttttgcattactacttgcatcatgatagcattattatattgcacatcattttttacctatttgggtgactagggtggtggagagcatcagctcagagcctaagagaactgtattgtactgaggacatgtccttgccctacaaaaggcaatggcctatggccaacttgtccatcctatgaagaaaatgagaggatggagatagtcggtacagagagaagctttggacaggacagagtagaaccatttacactttgcatgcacttctttttttcctgtgattatgtccaatcaaggggaaatgaattgagaaggaaacattgcacacaactcaaaacaaaatgagcagtgtgctcatcatgacactgaggtacatattggaactcaaagcatacacagaaatggtaactgaagaattggacatatcagtttctagctagctacagccaggggaatactttgggcctcgcagggagcccaggaatcagtagtctctagatcactccatgtggttttatcttacatgtataagtcttcaatttatacaaccatacaaatcttgtatccctatcccattcttcatttctttggtctagtttataggtttttctggaattgtgatgctaatgctagtttgtctgtagaaattttgatgaccaaactaattttagctaattgaatttgttgctagattcagtttactgataaacgccactatattatccagatacttggtacaggcttcttggtcattctttgtaatcttggaagacgacagcaaggtgatgtcaggtatgttatctcatctcttcaatctacattgcttgtgttgtctagagtgaaaacttggttttgttccaaacaaacaaacattgttaacattgtgttcttctatgccatagtacaacttatctttattctcttagaaatctactttacgtcatatgaaatggtaagataattaccaactgattgcttgtctttgatttcaatggttggtgaatgtttcccatctagaatatgctccgttctataagatgtatgtcttgattccctgtgtcatacaatacatagtccattgtgtcgtaggatgcttagttttacagcacaagtgctctgagggtgttagaagtgtagtgattgtgtaactgatgtaatagtttcacgtaactctgtatatcataatgttatttgtcaaactttttggcttctaaggggaagaataacaataattcaattattatatatactgggatgtcatgttgattaacaaactggtgtttatctagtaagaacctggagagcaaaattggcatggacacgaagttgctcactttttgcccctgttgacgttaaatttgttatacttacacgcagtgcatactccatatttaatgaagacttccgggagctaccaggaacgcttaacgcggagcgcatcgatagagacattcgggcaggccaattttgagcccgaaatctgatttactgggacgatgggcttaatgggatttgtacagaaggatagtgactcttctttggttctgatcctttgtacctggaaagacttttgaaagaggcccttagcagtgtgaatttacatgtgtacttcacagatggccagcattaaggttgaatggttgagatgcaatatgagtgaggtttgaaaggagggatgcacacatacatttactaatagatcagataaatcaaaccgagtcaatagaagcgcacgtatgtatgtcatgtaggagtataggtgagatttcaatctacatcaggaattcatgaagtaaatgtatattacccatcatgcgttaacataaatatcagatattcagatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0573100, RefSeq:Os09g0573100