Difference between revisions of "Os10g0142100"

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(Created page with "{{JaponicaGene| GeneName = Os10g0142100| Description = Zinc finger, RING-type domain containing protein| Version = NM_001070682.1 GI:115481107 GeneID:4348088| Length = 453...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0142100|
 
GeneName = Os10g0142100|

Revision as of 21:05, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0142100

Description

Zinc finger, RING-type domain containing protein

Version

NM_001070682.1 GI:115481107 GeneID:4348088

Length

4539 bp

Definition

Oryza sativa Japonica Group Os10g0142100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:2546524..2551062

Sequence Coding Region

2548536..2548598,2549205..2549334,2549422..2549559,2550096..2550205,2550532..2550561

Expression

GEO Profiles:Os10g0142100

Genome Context

<gbrowseImage1> name=NC_008403:2546524..2551062 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:2546524..2551062 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggttgctgttgttcatcgacaagatctgcatccgtcggagcaccagtttatatctatcatcaacaaaatccggcctctacaattgttgcaatagacaaaaatctggatacatccactcctgacacttaccgagcaccacctacacctttgccttatgatgttggtctagtgttgaaagataaccctgatttggagaagacaggcatcaagaggaaaattcatgaacataaggagtccttaatgatggatgataatgagtcattgcaaaaatgtgtctctgaagataagcctgatgaggaggatgtttgcccaatctgtcttgaagaatatgatgaagaaaatccccgctctatgactaaatgtgagcatcattttcatctttgctgcatacttgagtggatggagcggagtgaaacttgcccagtttgtgaccagataaccatgataaatgcgatgtatgaatag</cdnaseq>

Protein Sequence

<aaseq>MGGCCCSSTRSASVGAPVYIYHQQNPASTIVAIDKNLDTSTPDT YRAPPTPLPYDVGLVLKDNPDLEKTGIKRKIHEHKESLMMDDNESLQKCVSEDKPDEE DVCPICLEEYDEENPRSMTKCEHHFHLCCILEWMERSETCPVCDQITMINAMYE</aaseq>

Gene Sequence

<dnaseqindica>2013..2075#2682..2811#2899..3036#3573..3682#4009..4038#actcccccacgccaccgctcgccgccgccgccggctcagcttctcctcctcctccgccgccgccgccgccgtcctcgggtacggaccactactaccgagtagtacggagtactactgatatcaccctttcccctcggccgccttctgttcgatccacggggcgggcgggtggcgtctgtctttggagttcgtctcgcgtgggggaatttttctccctgacttgtgtcgtcttctcacgcgatcttgtctttctcttctctttaggtgaagcagcgcagttcggaggagggaggcggagggggtttgttcgccaacctagctcgctcgctcagctgccgagctcttcttcgctggtatggtggcccgcttctcctcttccttttgtttccgtgtgaatctcctactactgctgctgctgctactactactactactaattctagtttttgctcccttcaatccaagcgctatgaatattcttggtgagtaagtttgtaatttttgtttttaactcttaattgtgaattgtgattgcttcctagttgaacggaccacggctcgcgcgatcagatcaagtttgtttgcgttctttgccactggtatacctagattgctttctgcggtcgaattgtgttgaaagatcggatcaactcggttgattcagtgcagcttcccgctgtaacgacgaattgcactgtttttgctttcgatctgcatttttgttcttcactgatgtttgctgtggtattctcagtgtgttctgattttttggtatctagagataggacgtattttggttttgtaacttgtatgacagtctatgaagatggatgcaagtaaaatgccaaggttatcattatcgaattggatgttcttgctgcctgcaggatttattttctagatactgctaacaaggaaaaggatttcttttgctaggaaacaggaaattttcattgccttgccacatttttatttctatcagtcagatgattatagttgccagggaagctgatgctgagtactagttttttttttgctatgcgaaaccttgaaacagagggactagattcatcatggtattcattctagtgctaagccattttagttccttcacataattgattgcagcgatagcagtgtaatcagagcaaatttcactactttaagacactaaatgctatatgtgacaaatttcactactttaagatggtactccatatgagtttctcaggcttcctcaaattccagacaatatcttgtccaatagaaagtggtttccttgttcaaggctttaaagctttggccctgaacccctccctggtaccctgtataattttaaatctgtcaatttatcccactttgttattcacaatatgagtatgccatatgctgggctcatgtgctggtaccctgtatagtatgtacatttttttatcctcatgtgctgggctgctggctctgttatttacccttttgtggtaaaacaaattagacaggacaaaacataatacatttctataatctatagaggatgatcttttgtgtcatcttgcttgggtggtggaactcagcatgtgatgttgtggttcctgaatgtaccctctggtcaatttctgtagtacacactctagtgagatgaattcctgtttcctggtctgattttcaggttttgatgttatgcggtaagtggagttgtcaaaattgaagtactatatttttgatagagcgagatatcaaaaatcatcagttcatcatcatcattataaccaatcgttaactataattccacatgggaacaacacttgctaagctctctgcacagttttatacatgtgtactgattggtgcttttttgtcatctcgttttatgtatactttatcttctaagcatgatgtacttttgtttttcctgcaccaatataagactgtttttgtgtaggtctttgagagatgaaattttagtgatatcagctgctagaggatagactgaagtaactttcaacaattatagaatgggtggttgctgttgttcatcgacaagatctgcatccgtcggagcaccagtttatatctatgtatgtagacctgctgaattttctttattaattatgttatctctcttttgttggcatcacgcttttgaaaattgcataacgattatgtcaaaaaattttggctgaattaatcagttagcagtgctttttgttcaccttttcttagctgcaagttagatgaaagccaaatgaactgctctgtgttaatgcgtctctggttccagcccctctgcttctgtaatgttctgagttctgatatttgagtgtatgctagaatttgctgaaatgttcactgcagattcgaacaaaaaccgaatgctagaaattttgtattacctctgtggtttcaatgcaacagaagaaatgccttttactactaggacgcatttccttttctttgcagtccttgattctttagcattacaaattttctagacaccatgcatttgtgttatttgttcttatatagttaatgtgataattgcatacatttttaaagaattacggtttattagtatgttgacatggggatggcttcttttactcgtcagcctttctactgtaaatccttggcttgtcatgtaagttagctcaaggatactgatattcttcaccttgtgttgtcagcatcaacaaaatccggcctctacaattgttgcaatagacaaaaatctggatacatccactcctgacacttaccgagcaccacctacacctttgccttatgatgttggtctagtgttgaaagataaccctggtaaaaattgattatctctgagaatgagcaatgcttaatgatctccatgttatggatcaatgcttagagttccacattcttatgtagatttggagaagacaggcatcaagaggaaaattcatgaacataaggagtccttaatgatggatgataatgagtcattgcaaaaatgtgtctctgaagataagcctgatgaggaggatgtttgcccaatctgtcttgaaggttctgtttctcttgagcataggataatttactttcaatttgaaaggatcttaattaaactatgtttacttggttggtatacgcatgctttactgctcttatttcccactgttgtttgcttaataggtcagttcactttagtgagaacataatcttatataagatgcattcagttgggtgtgatgacaaatggttaggaaataatgataaatccctgaaaagaatgcctagagtctgccaaatatgtaactgtctaactggcagtgctatgggcctatgattgttgttttcgtgcattacacgcaatacgcagcagtctgtaatcatataaactgattatcgacactaacgatggcttgaacacttgactggtttgtagatagagaatccgaaatagtggaacattttatgagttcttctataaattgtttgcttccttttctgatgtacatgtgctgtgatgatcctctaatacaccgattatcacttcaatctcaattgaattcctgtaataacagtttttcgttattcaccagaatatgatgaagaaaatccccgctctatgactaaatgtgagcatcattttcatctttgctgcatacttgagtggatggagcggagtgaaacttgcccagtttgtgaccaggttagtgcaccaaaaccaatttatgtcaggctaaacacatttttgttgtagcccatggatgtgttttctgttgtcatttcctttatggactatggaggttgttttttttgggtatggtaatccattctgaatgcttacaggggaagttggtagtcgatctgaagctaaagaatacaaattttgatgtttgagattgttctgatggtcttattaattatttttctgttaatctaaagcccctaagttgaatatttccatctttgaaagaaattatttgaggaatagatggcctttatttgctgtaagctgactataccttcttgcagataaccatgataaatgcgatgtatgaatagccttggtggccctggtggatcctctcttgaagctcatgcttattcagtcggtttggcagaagtcatttgatggggaagcacaatgagcaactgctctgctctcgacattggtttggtcttttttggtggaaggagtgaaattaaggagacaaatgacatgaaatgttctggccaacactgttttgtacctttgttgccaatctttggctaatttatagcaagtagcaacaggaggattaggaaaatgcttggatgcgatatacataccggtcacatgatcattcagtcattcggttcaaagtccaaacattaaaaatcagctctttttttgtttaaacttaggacgaatgttacttcacttctaatccagttagtgtctgtgtatatcatacataacataggtgaaaaagaaaaattggtcgtagtctctcagtctaggcttcatttgtataatacttctagttggacaagctcctgaatacatcccttcctatttcctat</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0142100, RefSeq:Os10g0142100