Difference between revisions of "Os10g0188300"

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(Created page with "{{JaponicaGene| GeneName = Os10g0188300| Description = DNA polymerase, beta-like region domain containing protein| Version = NM_001070802.1 GI:115481347 GeneID:4348226| Le...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os10g0188300|
 
GeneName = Os10g0188300|

Revision as of 21:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os10g0188300

Description

DNA polymerase, beta-like region domain containing protein

Version

NM_001070802.1 GI:115481347 GeneID:4348226

Length

5744 bp

Definition

Oryza sativa Japonica Group Os10g0188300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:5785094..5790837

Sequence Coding Region

5786419..5786679,5787867..5788090,5788177..5788234,5789671..5789867,5790272..5790494

Expression

GEO Profiles:Os10g0188300

Genome Context

<gbrowseImage1> name=NC_008403:5785094..5790837 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:5785094..5790837 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaatttttgaatctctggtgccctcggatgaagaaatttcaaagcagaagcaattgctggcaacactgagcagattaataaataaggaatggcctaattcaaaactttacctctatggatcgtgtgctaattcatttggtttctcaaatagtgatattgatctttgtctgtctattgacgagaaggaaatgagcaaggttgacattattttgaaactggcacatattctccatgctggtaatctccggaatattcaggcattaactcgggcaagggtcccaatagtgaagcttatggatccaaatacagggctatcttgtgacatatgtgtcaataaccttttagcagttgttaacacaaaacttctaagagattattcacgaattgataaaaggttacggccattagcattcattgtgaagcattgggctaaatctcggtgtgtaaatgaaacttaccaaggaacactttctagttatgcctatgtgataatgtgcatccactacttacagtcacagagaatactcccatgtctacaggaaatggagccgacctattatgtcactgttgataataatatttgtgcatactttgatcaagtggacaaattaaatggctttggtgctcaatgcaaagacactttatcaaggttgctttggggcttttttcgttactgggcatatgcccataattacacaaaggatgtaatatcaattcggactggaagaaccattagtaagaatatgaaggattggacaagaagaattggaaatgacaggcatctcatttgcattgaagatccttttgagacctcccatgatcttggtcgtgttgttgacaatagatcgatctgggcactccgagaggaatttgagcgagctgcggagatattgcaccttgacccaaaccccagcatcacactttttgagccttatgtgccctctgaagctgaaacatga</cdnaseq>

Protein Sequence

<aaseq>MSIFESLVPSDEEISKQKQLLATLSRLINKEWPNSKLYLYGSCA NSFGFSNSDIDLCLSIDEKEMSKVDIILKLAHILHAGNLRNIQALTRARVPIVKLMDP NTGLSCDICVNNLLAVVNTKLLRDYSRIDKRLRPLAFIVKHWAKSRCVNETYQGTLSS YAYVIMCIHYLQSQRILPCLQEMEPTYYVTVDNNICAYFDQVDKLNGFGAQCKDTLSR LLWGFFRYWAYAHNYTKDVISIRTGRTISKNMKDWTRRIGNDRHLICIEDPFETSHDL GRVVDNRSIWALREEFERAAEILHLDPNPSITLFEPYVPSEAET</aaseq>

Gene Sequence

<dnaseqindica>1326..1586#2774..2997#3084..3141#4578..4774#5179..5401#ggtgaggccaaaagcacggtggtgcaaataaatggttcaaggagtaaggtaaattcgatttatcttgcagtgtaatataaatttctagctataacatagtgcgctcgccctctattttggtcttataatatgaaatgaaactaatatgttttgttctttctaccatgtgtattttatagcatgcatttgttctaacatctgagaaagaccaccaggattcttaatttggtctctgttgtgagtattgaatttaatatgacttctaaaagtaacagataatggaataaatatgcttctgttgaggcaaaatgcaaataagatacagccttactgttctagttgctcttgaattcatccaagttaatgccacacctttttttgacatgctagttgatcttgaactcaaactaaaccatatttattcatttaaatctgtatggaactttcgggatagacttcaatcttattttattttgttcctgaacttaagtgaacttgttaatatgaatatacatctgcatatactaattcttattaagttgagtcaaggttagacatttattatactgatcaactgatgtgcttgtttacaagtctaatccaagcagtgaaaccaaactatgggcctgtttgggggagctttagattctgagaagtagctgtttggtaaccagcttctgagaatctggaaaagctctaaaacccagcttctccagcttctagcttcttagttcatttttcagaatctgtaattgtggactgtttggggcagcttctagcagaagtagcttttctgcagctaggacaagctcccccaaacagggcctatagatatgagctcaagcttagtctgactacactcgtactcaaaactttctataacttctgccttaagctgtgcataacaaggctttactgagtatagcatgttgccaaccctcagttgcgattgatttggacccatatgtcagtaacagtagatcacattatagctattgtaatttactattccgcagaacaatcaaataacaaatttggtctggcagttctagcttcaagtgcgagctaactatctgtagcttttccccagttccattgttatgaacccccgctggttgccattgatacttaagcaaatgatttcacaattttgatgatccttacacatgttggacttgatcatgtaacttagtcatcctttcttttttgccttgcagaacttcagatcagattctagaggaaaaaatgtatcaagccaaagtgtaagatttcagaggagaattaggccatgtcggtatgacatagatcaatttacacctagttttatgtcaatttttgaatctctggtgccctcggatgaagaaatttcaaagcagaagcaattgctggcaacactgagcagattaataaataaggaatggcctaattcaaaactttacctctatggatcgtgtgctaattcatttggtttctcaaatagtgatattgatctttgtctgtctattgacgagaaggaaatgagcaaggttgacattattttgaaactggcacatattctccatgctggtaatctccggaatattcaggtgagctttagtctcctttcatgctgtgtcatgacatgttagatctttttgagttgaataataacttggcatattcgatatgtcctaaacaagggataattgatcgtacgccaccaattcgattgccaccgtaggattttccactatttgtagcctagttgataatttggcaccgtttagacaatataactctagcatttgccattttggactgttttgaatttatccttttccatttgattgtttttggcagcctggaccgatttttttcttccacttttgtcccatcttcatcctcttttttccccattctcaccatcctgcagcaatattgatggggttgaactctgagcggtccccagctgctgctactgcagggcttgggggtctgatgtagccataggtcattggcgcagtctgtgtgcgaaggtggcataggtaggtggcatgtggtgggggggttcttgaggaagctgtcgctgcagtctgggcaggcaacaaggggaatcctcatgtggttgtggcatgcacaaggtggtcacaagttgcatcagcagatgagggaagagcaggcaagcttggcagtggcggtggcaatgatgggtgcgtggctagatgtctgtgtaagacagcgagtgtggtgacattggtgacatgtcatgacagcgggagcgatcatcggctgttcaatcttctgtgctgctgctgctcttccacatcctctagtccctccacacctgctcattgatccatcccagctagagagaaatggaagtaggtggtagcaaagtggcagtttatatatatatatcagccacatctaataggttgcaatgaaaaaagagaatcaaatttgttccagagtggcatatccttgttggcttatctaattggtggcatatgatcaattaccctaacccccccccccacccaaaacaatgtgctgatgtggcctgcaatatctttctaaatcatgtgtcatgtgatatattcatatatcaagagttcatcgtttataacccaaatttatgttggtacattgactacatgctttgtgttttccatttggatgaaacattgaataatgaatataatgtttgtattaatctattttcatttgagacttgttccaatatggttggagtttgaacatatgtactaaatttctagcaaattaatgattgcaggcattaactcgggcaagggtcccaatagtgaagcttatggatccaaatacagggctatcttgtgacatatgtgtcaataaccttttagcagttgttaacacaaaacttctaagagattattcacgaattgataaaaggttacggccattagcattcattgtgaagcattgggctaaatctcggtgtgtaaatgaaacttaccaaggaacactttctagttatgcgtaagtttcctgtacaactcattaaatgttatccccttatgtctaaatgatcatggtcttaattttgttattttcttcacacccagctatgtgataatgtgcatccactacttacagtcacagagaatactcccatgtctacaggtatctggattatttatagtccaatttttgtacaattatttatagttatgcgtaagtattgtcgtcttttacatccataaaagacatgtattgctattacaaaacaaacgtttctaataatccatatatttgacaatacttgtcagtaacctaggttgaatgtatgaagcaataaacatatgcagcattttgcacctaaacccaatatttgttatgtgcaacaattatgaaagtaaaaaatgcatgcatcatactgatttggtaaacagatcagtaaaaaagtgatgggaccaccagattatccacctaggcatgccttgttcatctttctccccatcctcattctataaaaaagcggtcggtacatggtttcgggatgatttggcagccacctcactcaataccttccacatgaccaaccttgggacatcacttcgatgattttagtagttgagagacaagttctatttttgactggagttgagaaaccatgtgagacttcttcctaggtattatatgctgtgcctttctgtatattctgcaagtgtttctggattttttttgtgagggacagctagattattggtcttaaggatattttgctttctgttggtttagacttgtcccatcgttttgccttgttgatactgttgcttttatccaagaggggaaattttcacttaaattgagtaaagattatagtcccatatggtgagagcatagtggggcatacttttgcctgtgagagttattctaccaatatttgttgcctaccatctctgtcaaactcagggtgtgtttagttccacgccaaaattggaagtttgaagaaagttggaacgatgtgacggaaaagttggaagtttgtgtgtgtagaaaaattcgatgtgacgttttgagggttcaaactttgcaactaaacacggcctcatttctttgttattaaggccctgtttagatccgaccccaaaattttacacccagtcacatcgaacgtttgaacacctgcatgaagtattaaatataggctaaaaaaataactaacaacagattgcgactaatttgcgagacgaatcttttaagcctaatttctccatgatttgacaatgtggtgctacagtaaacatttgctaatgacagattaattagacttaataaattcatctcgcggtttactgacggattctgtaattagttttttttattagtgcccaaacatcccatgcaacatcctatataatacccgatgtgacacgccaaaactttacacccctgaatttaaacaccccctaagatatcataattcacaacagtgctgccctggcatgtaaaaaatagaacagctgtcatatctgtgtaccatgttgctgcatcttatttgctttttactaccataccattattttgtttgcaactaacagtcaatgatatgacaggaaatggagccgacctattatgtcactgttgataataatatttgtgcatactttgatcaagtggacaaattaaatggctttggtgctcaatgcaaagacactttatcaaggttgctttggggcttttttcgttactgggcatatgcccataattacacaaaggatgtaatatcaattcggactggaagaaccattaggtatgctacatatcccacatgttaaaccacgttttcatttccacaaatactgtcatcgtgctgagcttttgttccctggttcctgttagaatagtctatgatgtgtagcatatcccacatgttaaaccacgttttcatttccagaaaataccgttgtgctgagcttttgttccgtggttcctgttagaatagtctatgatgtgtaaaacggcaagcagcggctttagaatgcagcgacgtccagtatagaagtttaaattgaagtttctcttttcattcccaactaatgcgttatgaacaattgaacttgtggctaagtagctttaaatatatatttttatcgtatactggaatatgaagtagcttacggattgattttccttgtcattttggtcttctttcagtaagaatatgaaggattggacaagaagaattggaaatgacaggcatctcatttgcattgaagatccttttgagacctcccatgatcttggtcgtgttgttgacaatagatcgatctgggcactccgagaggaatttgagcgagctgcggagatattgcaccttgacccaaaccccagcatcacactttttgagccttatgtgccctctgaagctgaaacatgataccacaaaatcatcatcatcatgttctgctgtgtcaagaagcccttcagttccaaaggaatcttgtcaaagcttatgtcgtactatgtgcatagcttagctgtaccatgtatacttaagttgtaaagtaactaggggcctcagcagtaggtggtgacagcatgcttctgctaagtggtaattgggggaagccagcaatatttaatcagatttctagtgctatcaattcttatttagaaagggagatgtttgaactagacactactgtccgatatttcatgatagtttagcgtgcagtagtttttttccctaatgagaagaataataaagttgctttaagccc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0188300, RefSeq:Os10g0188300